Pseudochaenichthys georgianus (South Georgia icefish): 117465108
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Entry
117465108 CDS
T09629
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04060
Cytokine-cytokine receptor interaction
pgeo04217
Necroptosis
pgeo04620
Toll-like receptor signaling pathway
pgeo04621
NOD-like receptor signaling pathway
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04623
Cytosolic DNA-sensing pathway
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117465108
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117465108
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117465108
04621 NOD-like receptor signaling pathway
117465108
04622 RIG-I-like receptor signaling pathway
117465108
04623 Cytosolic DNA-sensing pathway
117465108
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117465108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117465108
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Interferons
117465108
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Gene cluster
GFIT
Motif
Pfam:
Interferon
AMMECR1
Motif
Other DBs
NCBI-GeneID:
117465108
NCBI-ProteinID:
XP_033963891
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Position
19:10912174..10913290
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AA seq
178 aa
AA seq
DB search
MLKGMFFVCLSLSLWTAGSSLSCRWMQHKFQQFSKHSLDLIDTMANNSTNTTVDAGVGFP
YRLYTKTSKASAEDRLHFLVQILKEMVVLFEEDTSNASWEENIEENFLQFLTRQEQGLRS
CIGTHKKENRKLHRYFQRLSSHVLKKMDHSAEAWELIRNKMKTHLVRADLLACSLLTN
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggaatgttcttcgtgtgcctgtctctcagtctgtggactgcaggctcctct
ctgagctgcagatggatgcagcataaattccaacagttcagtaaacactctttggatcta
atagataccatggctaacaactccaccaacaccactgtggatgctggagtgggcttccct
taccgtctgtacacaaagacgtccaaagcatcagctgaggacagactccatttcctagtt
cagattctgaaagagatggttgtcctgtttgaggaggataccagcaacgcatcatgggag
gagaacatagaggagaacttcctccagtttctaaccaggcaggaacaaggccttcgctca
tgtattgggacccacaagaaggagaacaggaagctacacaggtatttccaaagactctca
agccatgtcctgaaaaaaatggaccacagtgctgaggcctgggagctgatcaggaataag
atgaaaacccatcttgtgagagcagacctgctggcttgttctcttctcaccaactaa
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integrated database retrieval system