Pseudochaenichthys georgianus (South Georgia icefish): 117465236
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Entry
117465236 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: myoferlin-like
KO
K22125
myoferlin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117465236
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Others
Ferlins
117465236
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
117465236
NCBI-ProteinID:
XP_033964062
LinkDB
All DBs
Position
19:complement(23433545..23463267)
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AA seq
2067 aa
AA seq
DB search
MLRVKVESAKGLLKKKVGHPDPIVSVIFKDEKQKTKSIDSELNPVWNEVLEFDLKGVALD
YSAYIDVIVKDYETIGKNKFIGSTKIALKDLASGQMRSLPSKNVPLVNESGQGIGASIDL
VIGYDPPANFAPNPNDSNEGDSTVDAGGGGGDETQPDGGLGGSAGGPSSPGQSVNMRQKF
ARSQNRHRLVNKPQDFQIRIRIIEARQLSGNNVKPVVKVSVCDQTHRTRIKRGNNPFFDE
MFFYNVHMLPLDLFDKHISFRVYNSYSLRADSLMGEFKLDVGYVYDEPAHCVLRKWLLLN
DPDDSSSGSKGYLKVSLFVVGAGDEPPEEKRDSNDDQDDIESNLLLPAGVTLRWATLSLK
VFRAEDVPQMDDAFVQTMKEIFGGDENKKNLVDPFLEARFAGLKLCTKIIEKNANPEWNQ
VLNLQVKFPSMCERVKLTVFDWDRITGNDAIGTTYLNLSKIASSGGEIEEEHPGSGEIPS
YEANTGQSEVGFLPVFGPCYVNLYGSPREFSGLPDPYEDLNYGKGEGVAYRGRILVELST
KLEGKADKAVDSIHSDDILVVQKYQRRRKYSLCAVFHSASMIQEPGEPIQFEVSIGNYGN
KLDTTCKPLASTTQYSCAVFDGNHYYYLPWADTKPVVVVLSFWEDISHRLDAVNIILYIT
HRLQSNLELFKTAILAKVSDDQLVEVWLKLLNQLIEDLESLTTPELEGRSNLTSLDFQIK
KLRDSTLKTIKTGARCMLEEAREIADTLPDLESWAEKLQQLADEPQNSMPDVIIWMLRGD
KRVAYSRMPAHQFLYSTYSEQACGQHCGKTETVFLKYPMDKNKGLKVPVQIRVNIWLGLS
AHEKKFNSFSEGTFSVFAELYENQAAVFGKWGTTGLVGRCKFSDVTGKLKLKQEHFMPQR
GWEWEDDWFVDPEKALLTEADAGHTDFMDEVFQNETRFPGREWKEASEPFTDVNGEKSRN
PGEFDCPTGWTWEDEWSVDDNRAVDDQGWEYGVTIPPADQPKSWVSAEKVYHVHRRRRLF
RPRKREVHPAAGPVQKRDQGDPEGWEFSSLIGWKFHRKERSSDTFRRRRWRRKMGPEDRL
GASAIFQLEGALGVDTEDKDSKSDATKLFGANTPTVSCCFDKSHLYHLRVYVYQAQNLAS
MDKDSFSDPYAHVSFLHFSKTTEKLKATLNPTWDQTLIFSDVEIYGDPKNIAQCPPDVVL
EFYDHDQVGKDELLGRSVCTPMVKLNASMDQTPRLLWYPIIQKGQKAGEALLAAELILKD
KSGESDLPLLPSKRSENIYMVPQGIRPVVQLTAVEILVWGLRNMKSYQLASISSPSLVVE
CGGERVESVVIKNMKKCPNFPGSVLFIKVLLPKEEMYTPPIVLKVIDHRPFGRTPVVGQC
TITSLEQFRCDPYVITAEGAMSNKMTLMASPSGHLAINMETRPLLETQFMYSMSSAVNKM
ASPTSHFLVEKEKETVDWWCKLYASTGDQQKCGSYLKKGYDMLQVFDCELEDVPEFKGLT
DFCCTFKLLRGRNDNGDDDPSVVGEFKGSFKVYPLSDDPGVSPPPRQFRELPESRPQECL
VRIYVVQAIDLQPKDNNGKCDPXXDFSGKNTIDDRDHYLPNTTAPVFGRMFETTCFLPQD
KDLKISVYDYDMLTRDEKVGETVIDLENRFLSRYNSYCGLPQTYCISGINKWRDQMKPSL
ILENLARMKGLSKPRTEDNGTSLAFNGREYTLAEFGNRTPKEIHEHLGPPRERLCLHVLR
KQGLVPEHVETRTLYSTFQPNISQGKLQMWVDVFPKSIGPPGPPFDVTPRKPKKYFLRAV
VWNTTDVTLDEASITGEHMSDIYVKGWMAGMEDEKQKTDVHYRSLDGDGNFNWRFIFEFE
YLPAEQLCLVSKKERFWSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTLEVDLRNLVPPA
KTPNKCSLKMMEDLQMGSPVKKENEKSLFSQQSVRGWWPCSIEQDGERVLGGKVEMTLEI
VGEAEVDEKPAGKGRADPNMNPKLDPPKRPETSFFWFTNPCKTMKFIVWRRFRCLFIGLI
ILILVLLFLGILLYSLPNYIAMKLVKP
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttaaggtggaatcggcgaaaggtctacttaaaaagaaagtgggacaccct
gatccaatcgtctctgtgatatttaaagatgagaagcagaaaacaaaatcgattgacagt
gagctgaaccctgtctggaacgaggtgcttgagtttgatctgaagggcgttgcgttggac
tatagcgcctacatagatgtgattgtgaaagactatgaaactattgggaaaaataaattc
atcgggtcaaccaaaatcgctctgaaagatctcgcatcaggtcaaatgagatcacttccg
tccaaaaatgtccctctggtcaatgaaagtggacagggtattggtgcttcgatcgacctt
gtgattggctacgatcctccagcaaattttgccccaaaccccaatgactctaacgaagga
gactccacggtggatgctggtggtggtggaggggatgagactcaacctgatgggggcctg
ggtggctccgcagggggcccctcgtcccccggtcagtccgttaacatgcgacagaagttt
gccagatcgcagaatcgccaccgactggtcaataaacctcaggacttccagattcgcata
agaatcatcgaagcccgtcagctgtccggtaacaacgtcaaaccggtggtgaaggttagc
gtgtgcgatcagacccacaggacgaggatcaagaggggaaacaaccccttctttgacgag
atgttcttctacaatgtccacatgctaccattggatctcttcgataagcacatcagcttt
cgggtctataactcatattcactgagggctgacagtctcatgggagaattcaagctggac
gtcggttatgtttacgatgaaccagcgcactgtgttctgaggaagtggctcctgctgaac
gacccagatgactcgagctcggggtctaaaggttacctgaaagtcagcctcttcgtggtc
ggggctggagacgagcctccggaggaaaagagggattcaaatgacgatcaggacgacatc
gagagtaatctgctgctgccggccggtgtgactctgcgatgggccaccctgtccctgaag
gtgttcagagcggaggatgtcccccagatggatgatgcattcgtccagaccatgaaagag
atatttggaggagatgaaaacaagaaaaacctggtggatcctttcttagaggctcgcttt
gctggactaaagctgtgcactaagatcatcgagaagaatgcaaacccagagtggaaccaa
gtgctgaacctccaagtcaagttcccctccatgtgtgaacgcgtcaaactgacggtattt
gattgggatcgtatcacaggaaatgacgccatcggcaccacatacctgaacctgtccaag
atagcctcttctggtggagagatagaagaggaacatccaggaagtggggaaataccgtca
tacgaagctaacacggggcagtctgaggtgggtttccttcccgtcttcgggccgtgctac
gtcaacctgtacggcagcccgagagagttcagcggcctgccagacccctacgaggatctc
aactatggaaagggcgaaggagtggcgtacaggggcaggatcctggtggagctgtccact
aaactggaggggaaagcggacaaagcggtcgacagcatccacagcgacgacatcctggtg
gtgcagaagtaccagcggaggaggaagtacagtctgtgcgccgtcttccacagcgcctcc
atgatacaggaaccaggagagccaatccagtttgaggtcagcatcggtaactacggcaac
aaattggacaccacctgcaaaccgctggcctccaccactcagtacagctgtgcagtgttt
gatggtaaccactactattacctgccctgggcggacactaagccggtggttgtggttctc
tctttctgggaggacatcagccaccgcctggacgctgtcaacatcatcctctacatcact
caccgcctgcaatccaacctggagctgtttaaaaccgccatcctggctaaagtctccgac
gaccaactcgtagaggtgtggctgaagttgctcaatcagctgattgaagacctggaaagt
ctcacgacaccggagctagagggccgctccaacctgacctctctggacttccaaatcaag
aagctgcgcgacagcacgttgaaaacaatcaagacgggagccagatgcatgttggaggag
gcgagggagatcgctgacacgctgcctgacttagagtcctgggcggaaaaactccaacag
ctggctgatgagcctcagaacagcatgccggatgtgatcatctggatgctacggggggat
aagagagtggcttacagccgaatgcccgctcaccaattcctctactccacatacagtgag
caggcttgcgggcagcactgtgggaaaacagagaccgtcttcttaaagtatcccatggac
aagaacaaggggctgaaggtgccagttcagatccgggtgaacatctggctcggtctctct
gcgcatgagaagaagttcaactccttctctgagggaaccttcagcgtgtttgcagagctg
tacgagaaccaggcggcggtgtttgggaagtgggggaccacgggactagtggggcgatgc
aagttctcagacgttacgggcaaactgaagctgaaacaagaacacttcatgccccagaga
ggatgggagtgggaagacgactggttcgtcgacccagagaaagctctgctaacagaggca
gatgcaggacacactgatttcatggacgaggtgtttcagaatgagactcgcttccccggg
agagagtggaaggaagcctcggagcccttcaccgatgtgaatggagagaagagccgtaac
cccggagagttcgactgtcctacaggttggacgtgggaggacgagtggtctgtggacgac
aacagagccgtggatgatcaaggatgggagtatggagtcaccattcccccagctgaccag
ccaaagtcctgggtctctgcggagaaagtttaccacgtccaccgcaggagacgactgttc
cgacctcgcaagagagaagtgcatcctgcagcaggccctgtgcagaagagggaccaaggt
gaccctgagggctgggaattctcctctctgattggctggaagttccacaggaaggagcgt
tcctccgataccttccggcgaaggcgctggaggcggaaaatgggaccagaggaccgtctg
ggagcgtccgccatcttccaactggagggggcactaggcgtggataccgaggacaaggac
tccaagtcagacgccaccaagctgtttggtgccaacacgcccactgtgtcctgctgcttt
gacaagtcacacttgtaccatctccgtgtctacgtctatcaggctcagaacttggcatct
atggacaaagatagtttttctgatccgtatgcacacgtctccttcctgcacttcagtaag
acaacggagaagctgaaggcgaccctgaacccgacctgggaccagactctgatcttcagc
gatgtggagatttacggagacccgaagaacatcgctcagtgcccccccgatgtggttctg
gagttctacgaccacgaccaagtggggaaagacgagctgctgggccgcagtgtttgcact
ccgatggtgaagctgaacgccagcatggaccagactcccagactgctgtggtaccccatc
atccagaaaggtcaaaaggcaggcgaggccctgctggctgcagaactcatccttaaagac
aagtcgggcgagtcggaccttcctctgcttccctcaaaaagatcggagaacatctacatg
gttcctcagggcatccggcccgtggtgcagctcacggctgtcgagatcctggtatggggc
ctgaggaacatgaagtcgtaccagctggcctccatctcctcccccagcctggtggtggag
tgcgggggggagagggtggagtcggtcgtcatcaagaacatgaagaagtgccccaacttc
ccggggtctgtcctcttcatcaaagtgctccttccaaaggaggagatgtacaccccgccc
atcgtgctgaaggtgatcgaccaccgtccgttcggcaggactccggtggtcgggcagtgc
accatcaccagcttggagcagttcagatgcgacccgtacgtcatcactgcagagggagcc
atgtctaacaaaatgactctgatggcttctccttccggtcatctcgctattaacatggag
accagaccactgctggaaactcagttcatgtacagcatgtcatctgctgtcaacaaaatg
gcttcccctacatcccattttcttgtagagaaggaaaaagagacagtcgactggtggtgt
aaattatacgcttcaaccggagaccagcagaaatgtggctcgtacctcaaaaaaggatac
gacatgctccaagtgtttgactgcgagctggaggacgtcccagagttcaaagggctgact
gacttctgctgcaccttcaaactactgcggggcagaaatgacaatggggatgatgacccc
agtgtggttggagagtttaagggttcattcaaggtgtaccctctgtcagatgaccctggt
gtctcccccccgccccgtcagttcagagagctgccagagagcagacctcaggagtgtctg
gtccggatttacgtggtccaggccatcgacctgcagcccaaagacaataatggcaagtgt
gatccgtaataagatttctctggaaagaacacgattgacgacagagaccattacttgccc
aacaccaccgcccctgtgtttggaaggatgtttgagacgacgtgtttcctgccccaggat
aaagacctgaagatctccgtctatgactacgatatgctgacccgtgacgagaaggtcggc
gagaccgtgattgacctggagaaccgcttcctgtcccgatataactcctattgcggcctg
ccacaaacatactgcatttctggtatcaacaagtggcgggaccagatgaagccgtctctg
attctggagaacctggctcggatgaagggcctgtccaaacccaggaccgaagacaacggc
acatcactcgccttcaatggaagagaatacacgctggctgagtttggtaataggacaccc
aaggagatccacgagcacttgggccccccccgagagcgcctctgtctgcacgtgctcaga
aaacagggactggtccccgaacacgtggagacccggaccctctacagcaccttccagccc
aacatctcccagggaaagctccagatgtgggtggatgttttcccgaaaagcatcggaccc
cctggacccccgtttgacgtcacgccgcggaagcctaagaagtacttcctgcgtgcggtc
gtctggaacaccacagacgtgactttagacgaggccagcatcacaggagagcacatgagt
gacatctatgtcaaaggctggatggcgggcatggaggatgagaagcagaagacggacgtc
cactaccgctctctggacggagacggaaacttcaactggaggttcatctttgagtttgag
tatctgccggccgaacaactctgcctcgtgtccaagaaggagcgcttctggagtcttgac
aaaacagagttcaggattccccccaagctgatcgttcagatatgggataacgacaaattc
tcattggacgattacctgggcacgctggaggtggatctgcgtaacctggtgcctcctgcg
aagactccaaataaatgctctctgaagatgatggaggatctgcaaatgggatctccagtc
aagaaggagaacgagaagtctctgttctcccagcagtccgtcagaggctggtggccctgc
tccatcgaacaggacggagagagggtcctgggtggcaaagtggagatgactctggagatc
gtaggtgaagcagaagtagatgaaaaacctgcaggaaaaggccgggccgaccccaacatg
aacccaaaactggaccctcccaaacgaccagaaacgtccttcttttggttcacgaaccca
tgtaagaccatgaagttcatcgtgtggcgaaggttcaggtgcctcttcatcggactcatc
atcctcatcttagtgctgctcttcctcggcatcctgttgtactccttaccgaactacatc
gcaatgaagttggtgaaaccttag
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