Pseudochaenichthys georgianus (South Georgia icefish): 117465526
Help
Entry
117465526 CDS
T09629
Symbol
arhgap21a
Name
(RefSeq) rho GTPase-activating protein 21a isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117465526 (arhgap21a)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Others
Others
117465526 (arhgap21a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117465526 (arhgap21a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PDZ_6
PH
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
117465526
NCBI-ProteinID:
XP_033964256
LinkDB
All DBs
Position
20:complement(13574951..13670196)
Genome browser
AA seq
2059 aa
AA seq
DB search
MLAQRNGLPSGCKPVPLKDHPDLRDVDVSAEGCCSLSSSPSSGGCPWARLAGLDGCLSEP
YCLWFQLLARAYWGEVELGLSSPNRSVSWARLREASRKNCVLFRAKQKDGRDQSEASTLA
SPGAEEEPFSWPGPKTLHLRRTSQGFGFTLRHFIVYPPESAVHNSLKDEDNGSRGRQRNR
LEPMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCV
MPKDEDILQLFSRDITALAYSQDAYLKGNDAYSGNAQNIPEPPPICYPRIEVKAAGMAQT
SEPAAVIETSQGPAQGPERRGGVEEKSSRVEIPVPPSPTVQQTSKSQTVACVCNDNVRTV
AMPPDPVDRGSWVARAGPSHRTEENRYSPSKDSGSAKPRPLIPSIPGGAQLQYPSSHPTE
SSGYSPSSKPGPIYPDTLSPPVRAAAASPDTFSTAISPSANQYVPSPTAPSLSPHQNIDW
KNYTTYKDYIDAKRLHTYGCRTIQERLDSLRAAANSSSAYTQQRTQSPPSTSPRAELGSQ
ARRKSTSNDREVDSYSQGTSVTPLRSVSQERLGNGADRSRPIRNWPRSASEDALPFSSPT
GVHKPRARSCDYLGQQPGEPGGLAVFGDRVGLEDRLLLCRGEDARASRQGTGVRALPHLN
RSLTGQGEEGREGGLSNSSLAVPVFTKGTLDAVLPSRTDGVIMRPSRLPVKNSILDPSPA
LSSTKTTEPLKDQRANIMANHLGYSSPLHLQLRDRADSLKLEGRLEAGLAARSSSCSGTS
SKLPTQRQQPSLDVASSSGFSTTNGAVTQKPKVREISSSTGALIRTNGSLAEGVQGLDAT
VVVLRRDKNSGHPHIRPPSYVLAVNDQGGVTHKAPPLVKAGSADGAICWTSNDSFREMHL
RRLGDTRHRSGSNNLDDSLDSIPFIDEPSSPSTDQDSTHIPASAVISTTPIITTIPPSPT
VPAPFIRRQLSHDQDSLRLTIIESDSGTKTERSKSYDEGLDNYREESKGRGLIPGLKNLR
KALDRSSEDSGSRRDSSSDIFCDATKEGFMHFKQLNTEKGKRVGGGMRPWKQMYAVLRGP
YLCLYKDKKEGQARANCQTVDEPLPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAE
DREDMLAWIRVIQENSNLDEENAVFTSHDLISRKIKEYNTLMSPTGSKTEPSPKPSRQSL
SIRHTLLGGKGDTKATSPTTPKSEQERKNMHKDDTSPPKDKGTWRKGIPGLMRKPFEKKP
SPGVTFGVRLDDCPPALNNKFVPLIVEVCCNLVEDRGLEYTGIYRVPGNNAAISHMQEEL
NNKGMNDIDIQDDKWRDLNVISSLLKSFFRKLPEPLFTNDRYGDFIEANRTVDPVERLKV
LKRLLHELPDHHYETLKFLSAHLKTVADNSDKNKMEPRNLAIVFGPTLVRTTEDNMTHMV
THMPDQYRIVEALIQNYHWFFTEEGNEDPATMSHYGSAVESQPVPNIDHLLTNIGRTGTS
QGEVSDSPTSDSAKSKGSWGSGKDQCSRELLVSSIFAAASRKRKKSKEKPQHSSSDDDLD
SVFTKKEITGQNPNHLQIEVLSDSRPSPNAKPNAKQPEERKENGRAVEITPKAKREHRNS
LFLKEKTPPRPSPSPKISGPQTAPQRKSSSVSDPPSWLDENTSGTTSSGVSLSRSRPKKW
TGASPDLPAGASVGLASSQGASAGAEVSSITSDYSTTSSITFLTGAESSILSPELQCGEE
ADDERSELISEGRPMETDSESDFPVFAPSGGSSQSTPCPEDKSEARGSGAAEGSAAPKME
VRRLFPSQRMIECDTLSRRWSLRQKTDSESSVEGVSGSGERSESRSESSTRLSRVLEVMK
KGRSTSSLSSSSRSESERAEPAWHVKITERLKLRLRTSADDMFTQKNRGTEARGKKKNIR
RRHTMGGQRDFAELAVINDWREQGGVDQTADLSALDRLKPRCSSQDFSIQNWITRERCRG
SNSSVEVAPKALPEDQEAQEVASGRPPPPSESPSVQPPAGEQVNGSGLQSKNKASLGADP
HPHKLSGAQVVRSRFYQYL
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccagaggaacgggctaccttcaggctgtaagccggttcctctgaaggaccac
ccggaccttcgggatgtagacgtgagcgcagaagggtgctgctccctctcttcttcccca
tcctctggaggttgtccctgggctcggctggccgggctggacggctgcctgtcggaaccg
tactgtctttggttccagcttttagccagagcctactggggagaggtggaactggggctc
agcagtcccaaccgcagcgtgtcctgggctcggctccgagaagcctccagaaagaactgt
gtcctctttcgggccaagcagaaggatgggcgcgatcagagcgaggcgtcgaccctggct
tctcccggggcagaggaggagcctttctcctggccggggcccaaaactcttcacctgcgg
cgaacctctcagggcttcggcttcacactgcgacacttcatcgtctacccgcctgagtct
gctgtccacaactctctgaaggatgaagacaatggcagccgtgggagacagcggaaccgc
ctggagccaatggacaccattttcgtcaagcaagtgaaggagggaggccccgcccatgga
gctggactctgtacaggggaccggattgtgaaggtgaatggagagagcatcattgggaag
acatactcgcaagtcatagccttgatccagaacagcgatgcctcgctggaactctgtgtg
atgccaaaggatgaggatattttgcagctgttttccagggatatcactgctctggcgtat
tcccaggatgcatacctcaaaggaaatgatgcgtacagcggaaatgcccagaacatccca
gagccccctccgatatgctacccacggatagaagttaaggctgcgggcatggctcagaca
tcagagcccgccgcagtcattgagacctcccaaggtccggctcagggaccagaaagaaga
gggggggtggaagagaaaagctccagggttgaaatccctgttccgccatcgcctacagtc
caacagacgtcaaagtctcagacagtggcgtgtgtctgcaatgacaatgtgaggacagta
gccatgcctcctgatccagttgacagggggtcctgggtggctcgggctggacccagccac
aggacagaggaaaatcggtacagtccttcaaaggattcaggctcagctaaaccaagaccc
cttattccctcaatacctgggggtgcacagttgcagtacccctcttcccatcccacggaa
agctcaggctactccccttcttcaaaacctggtccgatctatcctgacacgttgtcgcca
cctgtacgggccgccgctgcctcaccggacacgttctccactgccatatcacccagcgcc
aaccaatacgtaccctctcccacagccccctccctctctccacatcagaacatagactgg
aaaaactacacaacctataaggactatattgacgccaagaggctgcacacgtatggctgc
cgcaccatacaggaacgcttggacagcttgcgggcagctgctaattccagctccgcttac
acacagcaacgtacacagtctcctcctagcaccagtccaagagcggaactgggctcccaa
gctagaaggaaaagcacctccaatgaccgcgaggtagattcttatagccagggcacttca
gtcactccattacgtagcgtttcccaagagaggcttggaaatggggcagaccggtcaaga
ccaatcaggaattggccaaggagtgcttccgaggatgctctgcctttctcaagccccaca
ggagtgcacaaacctcgggcgaggtcttgtgactacctggggcagcagcctggagaacca
ggtggcttggcagtgtttggagatagagtagggttggaggaccggttgttgctgtgtcgg
ggagaggatgccagagctagcaggcagggaacaggagtaagagctttacctcatctaaac
aggagtctcactggacagggggaagaagggcgagaaggtggactatccaactcgtcttta
gctgttcctgtgtttactaaaggtacattggatgctgtactaccatcaaggacggacggt
gtcataatgagaccgtcacgtctgcctgtcaaaaactctatcttagacccttcacctgcc
ttatcctccaccaagaccacagagcctcttaaagaccaaagagctaacatcatggccaac
cacctgggctactcctcgcctctgcacctgcagctccgagacagggctgacagtctgaaa
ctagagggcaggttagaggctgggttggcagccaggtcctcctcttgctctggtacttcc
tctaaactgcccacgcagagacagcaaccaagtttagatgttgcttcttcttctggtttc
tccaccactaatggagctgtgactcaaaagccaaaagtcagagaaatctccagctccacc
ggcgctcttatacggactaatggcagtctggcagagggcgtacaaggcctggatgcaaca
gtcgttgttttaagaagggacaaaaactccggacatccccacatccgccctccatcctat
gtactagctgttaatgaccagggaggagtgacacacaaggcaccaccattggtgaaggca
ggctctgccgatggagctatatgctggacatcaaatgacagctttagggagatgcatctc
agaaggctgggagacacacgacataggtctggctccaacaacttggatgactccctggat
tctatcccattcatagatgaaccatcgagtccaagtactgaccaggacagtacacacatt
cctgcctccgctgttatatccacaacgcccatcatcaccaccatccctcccagcccaacc
gttccggcccctttcattcgacgccagctgtcacatgaccaagattctctacgtctcaca
atcatcgagtcagattctggtactaaaacagagcggtccaagtcatatgatgaaggcctc
gataactaccgggaagaaagcaaagggaggggcttgatacctggtctgaaaaatcttagg
aaggcgttggacaggtcatccgaagattcgggttcaaggagggactcttcatcagacatc
ttctgtgatgccaccaaggagggttttatgcatttcaaacagctgaacacagagaagggc
aagcgcgttggaggaggtatgcgtccatggaaacagatgtacgccgtgttgagaggcccc
tacctctgcctgtacaaagacaaaaaggaggggcaggctcgtgccaactgccaaacagtg
gacgagcccctgccaatcagcatcaaggcctgtctgattgacatctcgtacagcgacacg
aagcgaaagaacgtgctaaggctgaccacgtccgactgcgagtacctgttccaggccgag
gaccgggaggacatgctggcctggatcagagtcatacaggagaacagcaacctggatgag
gagaatgcagtcttcaccagccatgacctcatcagcaggaagatcaaagagtacaacacc
ttgatgagcccgacaggaagcaagacagagccatcacccaaaccttcacgccagtcactg
agcatcagacacacactgctgggagggaagggggacaccaaagcaacaagcccaaccaca
cccaaatctgagcaggagaggaagaacatgcacaaagatgacacaagccctcccaaggac
aaagggacatggaggaagggcatcccggggctgatgaggaaaccttttgagaagaaaccg
tctccaggagtcacgtttggagtgaggctggacgattgtcctcctgcactgaacaacaag
tttgtgcccctgatcgtggaggtgtgttgtaacctggtggaggacagggggttggagtac
acaggcatatacagagtgcctggaaacaacgcagcaatctcacacatgcaggaggagctc
aataacaagggcatgaacgatatcgatatccaggatgataaatggagggacctgaatgtg
atcagcagtttgctaaagtccttcttccgtaaacttccagagccattattcactaatgat
aggtacggagattttatagaagccaacagaacagtagacccagtggagagactcaaagtg
ctaaagaggctgcttcatgagttgccggatcatcattacgagaccctcaagttcctctca
gctcatctcaaaactgtggctgacaactcagacaagaataagatggaaccaagaaacctt
gccatcgtgtttggtcccacgctggtgcgcaccacagaggacaacatgacacatatggtg
acacacatgcccgaccagtacaggatagtggaggccctcattcagaactatcactggttt
ttcactgaagaaggaaatgaagatccagcgactatgtcccattatgggagtgcggtggag
tctcagcccgtccccaacatcgaccacctgctcaccaacatcggccgtacgggcacctcg
cagggtgaagtatcagattcacccactagtgactcagcgaaatcaaagggttcctggggc
tcagggaaggaccagtgcagccgagagctcctggtctcctccatctttgctgcagccagc
cgcaaaagaaagaaatcaaaggagaagccgcagcatagcagctcagatgacgatctggat
tcagtttttaccaagaaggaaatcactggacagaatccgaaccacctccagattgaggta
ctgagcgacagtcgtcctagccccaacgcaaaacccaacgctaagcaaccagaggagagg
aaagagaacgggagagctgtggagatcacacctaaagccaagagagagcacagaaactcc
ttgttcctgaaggagaagactccacccagaccctcaccttccccaaagatctcaggcccc
caaacagctcctcagaggaagtcctcctctgtgtcggaccccccatcctggcttgatgag
aacacctccgggaccacgagttctggagtgtctctgtcccgctcgaggcccaaaaagtgg
actggagcatctcctgatcttcctgctggagcgagtgtcggactggcttcaagtcaaggg
gcgtccgcgggcgcagaggtgagctccatcacctctgactactccaccacttcctccatc
acgttcctgaccggagccgagtccagcatcctcagtccggagctgcagtgtggggaggag
gccgacgacgagcgcagtgagctcatcagcgaggggcgacccatggagacggacagtgag
agtgacttcccggtgttcgccccgagcggaggcagcagccaatctacaccctgcccagaa
gacaagagtgaagcaagaggaagtggagcagcagaggggagtgccgcgcccaaaatggaa
gtgcgacgcctcttcccgtcgcagaggatgattgagtgcgacacgctctccagaaggtgg
tctctgagacagaaaacagacagtgagtcgtcagtggagggtgtttctggaagtggagag
cgtagcgagagcaggtcggagtcttccaccaggctctctcgagttctggaggtgatgaag
aaaggccggtcgacaagcagcctcagctcgtcttcacgcagcgagtcggaacgtgccgaa
ccagcctggcacgtaaaaatcaccgagcggctcaagttgaggttacgcacatctgcggac
gacatgttcacccagaagaaccgaggcacggaggctcgagggaagaagaagaacatccgc
cggagacacaccatgggcgggcagagggacttcgcagagctggcggtcatcaacgactgg
agggagcagggaggggtggaccagaccgccgatctgtccgctctggaccgcctcaagccc
agatgttcctctcaggacttctccatccagaactggatcacaagagagcgatgtagagga
tcgaattcaagtgtcgaggtcgcgcctaaagccctcccggaggaccaagaagcccaggaa
gtagcttctggaagaccccctcctccatctgagtctccgagcgtacagccaccagcgggg
gagcaagtgaacggtagcgggctgcaaagtaaaaacaaagccagcctcggggcggaccct
cacccacacaaactgtccggggcacaggttgtacgctcacggttctaccagtatctgtga
DBGET
integrated database retrieval system
