Pseudochaenichthys georgianus (South Georgia icefish): 117465567
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Entry
117465567 CDS
T09629
Symbol
nup58
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117465567 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117465567 (nup58)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117465567 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
117465567
NCBI-ProteinID:
XP_033964343
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All DBs
Position
20:3542297..3556404
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AA seq
597 aa
AA seq
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MSGFNYGSGTLGAANPGGGFSFGGAPVHLQANAGGFSMGTALGTAATTLAATTGATPSLG
LGGGLFGQKPTGGFSFNTPASGAVAPPTGLTLGLFVAPAANRCMPLRFSLAFTKPTASAP
PFSLTXTSTPLAASXVAGLSFGSCPDSPAHSRTSAFGLGLGGAATHHSSILNRPNTGWKS
FFANTLASGLGQTLGGGLTLGSLLASSTASAVAPAPSLGLGGVDFSTSSENKSDTSSGAN
ASKDSKALKDENLPPVICQDVXEFSKIVKDQKQVQEDISRMSSNGHFXSPDDIKSLKQSL
SVSASGLQRQALAIDKLKMEKQLENADIALRTQKTPPGLRMRTMLHQIYFRRPGRQFEVQ
LQSTDQQIEELENHLTTQSXGSHITLRLDTWLCRSLYQTFVAQAAQLQSVHENVKILKHQ
YLLYRRAFLEDSTDVFESKRASNRKWQSTPRVTTGPAPFSNVPNAAAVAMAAKLTQQQQP
TPGTQAPLGVGFGNPFASAVGTSLGSSTLGGFVGGPGFGGVGTGGSSFAFSTSKPTGGSL
SAGFGSSSTSGFNFSNPGLNTSAGLTFGVSNPAAAGFGQTPLLQLKKPPAGNKMGKR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatttaactatggatcagggaccctgggagccgccaaccctggtgggggattc
tcatttggaggcgcaccagtacacctgcaggccaatgccggtggcttctctatgggcaca
gccctcggtacagcagccacaacccttgctgccaccacaggcgccaccccatctctcgga
cttggaggcggtctcttcggtcagaaacctactggaggattctctttcaacactcctgca
tcaggtgctgttgcaccccctacaggccttacattaggtttgtttgtggcacctgccgct
aacaggtgcatgccactgcgttttagcttggccttcaccaagcccaccgcctcagcacca
cccttctccctcaccnnaacctccacgcccttggcagcctcctgagtggcaggcttatcg
ttcggctcatgtcctgacagcccagctcacagcaggacttcagccttcggcctgggtctt
gggggcgcagcaacccaccacagcagcatccttaacaggccaaacactgggtggaagtcc
ttcttcgccaacactttggcttcaggtttgggtcagactcttggaggcgggttaacgtta
ggttctctgttagcttcctccactgcatcagcagtggccccggcccccagtcttggcctg
ggtggagtcgacttcagcacgtcctctgagaataagagcgacacatcatctggagccaat
gcaagtaaggacagtaaagctttgaaagatgagaacctaccacctgttatttgtcaggat
gtatgagaattttccaaaattgttaaagaccagaaacaggttcaggaagacatcagcagg
atgtcatcgaacggccatttctaaagtccagacgacatcaagagcctcaaacagtctctc
tctgtcagcgccagcggcctgcagcgccaagctctggccatcgacaagctcaagatggaa
aaacagcttgaaaatgctgacatcgcactgcgtacacagaagaccccccctggacttcgc
atgagaacaatgctccatcagatttatttccggaggcctggtagacagtttgaggtgcag
ttgcagagtaccgaccagcagatagaagaattggagaaccacctgacaacgcagagcngt
ggctcccacatcactctcagacttgacacctggctatgcagaagtttgtaccagacattt
gtcgcacaggctgcccagctccagtctgttcatgagaatgtcaagatcttgaagcaccaa
tacctcctctaccgccgggcctttctagaagactctacggacgtctttgagtccaaacgg
gcgtcaaacaggaagtggcagagcacgccgcgagtcacgacggggccggcccctttctct
aatgtgcccaacgctgcagcggttgccatggcagccaagttgacccagcaacagcagcca
actccagggacccaggcacccttgggggtagggttcggaaacccctttgcctcggcagtg
ggcactagcttgggctcttctacccttggaggttttgttggtgggccaggatttggtggg
gtggggactggggggtcttcttttgccttctccaccagtaagcccacaggaggcagtctg
agtgcaggtttcggtagcagcagcacctcaggatttaacttcagtaaccctggcctcaac
acgtcggctggcctgacctttggcgtgtctaacccggcggctgcgggcttcggccaaaca
cccctcctccagctcaagaaaccccctgctggtaacaaaatgggcaagagataa
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