Pseudochaenichthys georgianus (South Georgia icefish): 117465647
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Entry
117465647 CDS
T09629
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117465647 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117465647 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117465647 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
ig
Ig_J
Tissue_fac
C2-set_3
Ig_CD22
DUF4124
Motif
Other DBs
NCBI-GeneID:
117465647
NCBI-ProteinID:
XP_033964477
LinkDB
All DBs
Position
20:17015797..17040980
Genome browser
AA seq
1521 aa
AA seq
DB search
MSGSLPFYQKHHLHYDRDYRSKETVSKLSQYQASNRYTAGSSTSAATSRSSGLNVSTHYG
LEASRLSPILKRAKPTYLAVDKDHQIIGYVVPIFRGSQEFGTGFSSREEARVRDSSEYMA
RRDLFTSGMEMERSEQTSRREAIRETAERISLNKRIHEHGVHFKRMNEDSLMHTPEFVIK
PRSHTVWEKQCVRLYCTVRGWPDPRVVWYKNNVAIDSVGHGDKYKLESKYNMHSLEINRC
DFDDTAQYRVSAMNSKGELSSFASVVVKRFKGDMDESLPSPRRGSTEDGPVCEYGVNFKT
HIVDTFGVTFGREGETISLGCTVIISPALHRYQPEIQWYRDDVLLSPSKWYNMHWSGDHA
TMTLTHLNKEDEGLYTLRVITKSGYETYSAYVFVRDSEAEVERAPGAPLDVRCLDANKDY
IIVTWKQPAVDGGDSILGYFVDRCEVGTTHWVQCNDTPVKFARFPVTGLVEGRSYMFRVR
AVNQNGMSHPSRVSEPVAAMDPSDRARIRGASAPWTGQIIVTEEEPAEGIVPGRPLELQV
TEATKNYVVLSWKPPGDKGLEGVMYYVEKCVAGSDTWQRVNTEIPVKSPRFALFDLAEGN
SYSFRVRCCNAAGVGEPSDPTEASTVGDKLDIPSAPSKVVPIRNTDTSVVVSWQASCEAK
ELVGYYIEASVLDSNEWAPCNNKPVNVTRFICHGLTTGEKYVFRVRAVNAAGLSQFSPES
EPVEVKAAIGGGIPHASPTPPYGITVLECVFDSMVLSWKQPTFIGGADITGYFVDYREVI
DGVTGKWHEANIRSISERAYRVSDLKEKRKYQFQVRAANMAGVGIPSLPSDTFLCEEWTI
AVPGPPHDLQVREVRSDSLVLLWKPPVYQGRDPVNGFYIDIKEADAPVEAWKGVNTKATE
KTFFKIKNLKEGGNFVFRVRAQNKAGVGQTSEETEPVIAVTKPGTKEIVVDVDDDGIISM
NFECCDTTQDSKFVWSKNYEEIADTSRLTIETKGNKSKTIFNTPAEEDIGIYSCIVTHTD
GASSSYTLSEEELKRLLEVSHDHKFPVIPLKSELAVELLEKGKVRFWLQADKMSANGKVD
YIFNDNLISQGDKYKVNFDKNTGVIEMIMDSLTPADEGTFTFKLQDGKATNQSSLVLIGD
VFKELQKESEFQMKEWVRKQGPHFIEYLGYEVTPECCVVLKCKVGNMKKDTSALWYKDGH
EIKADENLGFTEGVLKLEIAQISKKDSGVYEVVLKDDRGKDTSTLNLTDKGFKDLMNEVF
SFIANSSTPLKITSTENGIRLYTFVSYYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWL
QISEPSEKDMGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAIAERSRARVAG
GLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNDREITSDEHCILKFESGKFASFTITGV
NISDSGKYSILVKNKYGTESGDFTVETTDGTPDLGVTSYWTDADGNVVFGPNTPKEKMNT
TVTGTKTPKRKESVARKVPME
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctttaccgttctaccagaagcaccacctccactatgaccgtgactacagg
agcaaggagacagtgtccaaactgagccagtaccaggccagcaacaggtacacggctggc
agcagcacctccgctgccaccagcaggagcagtggacttaacgtgtctacgcattatggg
ctggaagcgagcagactgagccctatactcaagagggccaagccaacttacttggctgtg
gataaggaccaccaaatcatcggctacgtagtgcctatcttcaggggcagtcaagagttt
gggactgggttttcgagtagagaggaagcaagggtgcgggactcttctgagtacatggcg
cgcagggatttgttcaccagtggcatggagatggagaggtcagagcagacctccaggagg
gaggccattcgagagacggccgagcgcatctctctaaataaaaggatccatgaacacggg
gtacactttaagcgtatgaacgaagacagcctgatgcataccccggagtttgtgattaaa
ccgcgctcccacactgtgtgggagaagcagtgtgtgcggctgtactgcactgtcagaggc
tggccggacccccgggtcgtctggtacaaaaacaatgttgccatcgactctgttggccat
ggtgacaagtacaaacttgagagcaaatacaacatgcactcactggagatcaacagatgt
gatttcgatgacacggcccagtatcgtgtctctgccatgaactccaagggagagctgtct
tcatttgcctctgtcgttgttaagaggttcaaaggtgatatggatgagtccctgccatcc
cctagacggggcagtactgaagatggccccgtgtgtgagtacggcgtaaacttcaagact
cacattgttgatacatttggtgtgacgtttggaagagagggtgagaccattagtcttgga
tgtacagtcatcatttcccctgccctgcaccgctaccagccagagatccagtggtacaga
gacgatgtccttctgtctccttctaaatggtacaacatgcactggagtggagatcacgcc
acaatgaccctcacacacctgaacaaagaggacgaggggctctacaccctgcgtgtcatc
accaagtctggatatgaaacctactccgcctacgtctttgtcagagattctgaagctgag
gttgaaagagctcctggagcccctctggatgtgcgctgcctggatgccaacaaggattac
atcatcgtcacctggaagcagccagctgtcgatgggggagactctattttgggctacttt
gtggacagatgtgaggttggaaccacccactgggtccaatgcaatgacactccggttaag
tttgcccgtttccccgtcaccggtctggtggagggccgctcctacatgttccgtgtgcgt
gccgtcaaccagaatggcatgagccacccgtccagggtctctgagccggtggctgccatg
gacccctctgaccgcgcccgcattagaggtgcctctgctccttggactggccaaatcatt
gtcacagaggaggagcctgcagagggcattgttcctggcagacctcttgagctgcaggtg
acagaggccaccaagaactatgtggtgctgagctggaagccccctggagacaaaggcctt
gagggtgtcatgtactatgtggaaaaatgtgttgcgggctcagacacctggcagagggtg
aacactgagatccccgtcaagtctcctcgctttgccctgtttgatcttgctgaggggaat
tcctacagcttccgcgtccgctgctgcaacgctgctggtgtcggcgagccatctgatcca
acggaggcctcaactgttggagacaagcttgatatcccatctgccccaagcaaagttgtc
cctatcagaaacacagacacatccgttgttgtgtcttggcaagcatcctgtgaagctaag
gagttggttggatactacattgaggcgagcgttttggacagcaatgagtgggcgccatgc
aacaacaagcctgttaatgttaccaggttcatctgccatggtctgacgacgggagagaaa
tacgtgttcagggtgagggcagtgaacgcagcagggctcagccagttctccccagagtct
gagcctgtggaggtgaaggctgctattgggggcggcatccctcatgcctcccctactcca
ccctatggcatcactgtcctggagtgtgtatttgactccatggtgctgtcctggaaacag
ccaacattcatcggcggtgctgacatcaccggatacttcgtggattaccgtgaggtcatc
gatggcgtgacagggaagtggcacgaggccaacatcaggtcgatcagcgagagagcctac
agggtgtctgatctgaaggagaagaggaagtatcagttccaggtgcgggcagccaacatg
gcaggtgtcggcatcccttcactgcccagtgacaccttcctgtgcgaggagtggaccatc
gccgtgccagggcctcctcatgacctgcaggtaagagaggtgcgtagcgactctctggtg
ttgctttggaaaccacctgtataccagggccgtgatccggtcaacgggttttacatcgac
atcaaggaagcagacgcaccagtggaggcgtggaaaggagtcaacactaaggccacagag
aagacgttcttcaagattaagaatctgaaggaaggggggaattttgtgttccgtgtacgc
gctcagaataaagctggtgttggacaaacctcagaggaaacagagccggtcatagctgtc
actaaaccaggcactaaggagatcgtagtggatgttgacgatgacggtatcatatccatg
aatttcgaatgctgtgacacaacccaagactccaaatttgtgtggtccaagaattacgag
gaaatagcagacacatcccgcctgacaatagagaccaagggaaacaaatccaaaactatt
ttcaatactcctgcggaggaggacattggtatttactcatgtattgtcacccacactgat
ggtgcttcatccagctacactctctctgaggaagagttgaagaggctgctggaggtcagt
catgaccacaaattccccgttattcccctgaagtcagagttggctgtggagctgttggag
aagggcaaagttcgcttttggctgcaggcggacaagatgtcagctaacggcaaagtcgat
tacatcttcaatgataaccttatctctcagggggataaatacaaggtcaactttgacaag
aacaccggcgtgattgagatgatcatggactctctgactccagctgatgagggcaccttc
accttcaaattgcaggatggaaaggctaccaaccagtccagtttggtactgataggagac
gtgttcaaggagctgcagaaggaatcagagttccagatgaaagaatgggtcagaaagcaa
ggtcctcacttcatcgagtatttgggttatgaggtgacaccagagtgctgcgttgttctg
aaatgcaaggttggaaacatgaagaaggacacctctgcgctgtggtacaaagatggacac
gagattaaagcagacgagaatctgggattcacagagggagttctgaaactggaaattgct
cagatttccaagaaagactctggtgtgtatgaggttgttctgaaggacgacagagggaag
gacacttccacgttgaatttgaccgataaaggtttcaaagacctgatgaatgaagttttc
agtttcatcgccaattcctccactccgctgaagatcacaagcacagaaaatggcatccga
ctctacacctttgtcagctactataacgatttactccaagtgacatggcactacaaggat
tcggccatctccttctctgaccgcattaagagtggagtggtgggggagcagctgtggctg
cagatctcagagccctcagagaaagacatgggcaaatatgccattgagtttaacgatggg
aaaggtggcttgaggaggaccgtggagctgtctggtcaagcatttgacgatgcttttgca
gaattccagagactcaaagctgctgctattgcagagagaagtcgtgctcgagtagcagga
ggcctgcctgatgtggtcactatacaggagggcaaggccctcaatctcacctgcaacatt
tcgggcgaccccgtgccagaggtcacctggctgaagaacgacagggagatcacgtccgac
gaacactgcattctcaagttcgagtcaggcaagttcgccagcttcaccatcaccggcgtc
aacatctcggactctggcaagtacagcatcctggtgaagaacaagtacggcacggagagc
ggggacttcaccgtggagaccacagatggaacacctgacctgggggtgacgtcatactgg
actgatgcagacggaaatgtagtgtttggcccaaacaccccaaaggagaagatgaacacc
acagtcactggaacgaaaaccccaaagcggaaggaatctgtagctaggaaagttccaatg
gaatag
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integrated database retrieval system
