Pseudochaenichthys georgianus (South Georgia icefish): 117465698
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Entry
117465698 CDS
T09629
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pgeo01100
Metabolic pathways
Module
pgeo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117465698 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117465698 (chsy1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117465698 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117465698 (chsy1)
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
O-Glycan
117465698 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
117465698
NCBI-ProteinID:
XP_033964562
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All DBs
Position
3:6038743..6097004
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AA seq
798 aa
AA seq
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MAGRSRRAWFSVLLGLVVGFTLASRLVLPKTTELKKAGQKRTANPAGCGLNGGHRKEYDG
VLWPPQDNSLPATEKPGSGSNHFLFVGVMTAQKYLNSRAVAAHRTWAQTVPGRVEFFSSE
GSDTSIPIPIVALKNVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKSEKLES
FLRSLNSSEAIFLGQTGMGAREELGKLALEPGENFCMGGPGVIMSREVLKRMVPHIRECL
QEMYTTHEDVEIGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKSPPYQYRLHSYMLSRKIADLRHRTIQLHREIVQMGRYGANEPSREDLQLGMPPSFM
RFHPRQREEVLEWEFLTGKYLFSSSDKQPPRRAMDSSQRQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFK
EEEEMDARALASHINKDSDSLSFLSNSLKMLVPFKLASGPDQKEPKEKKVNILVPLSGRY
DIFVRFMANFERVCLIPNQNVKLLILLFSTDNNTEQVKQVELMREYHMKYPRSEIEIKPI
TGSFSRALALEVGSLHFSNDSLLFYCDVDLLFTSDFLKRCRKNTAPGEQTYFPIIFSQYD
PKVVYAGKVPSNNHYVFTSKTGLWRNYGFGIVCVYKGDLVRAGGFDTSIQGWGLEDVDLF
NKFVQSGLKLFRSTDTGIVHVHHPVICDPNLGVKQYKMCLGSKASSHGSSQQLAELWLEK
NEHGFRRAASNNGSARTA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagccgaagagcctggtttagtgttctgctggggttggtggtcgggttc
acgctggcttccagactcgtcttacccaagacgactgagctaaagaaagccggacagaaa
cggacggcgaaccccgcaggctgtggactgaacgggggtcacaggaaggaatacgacgga
gtactatggccaccgcaagataacagtttaccggcgaccgagaagcctggctccgggtcc
aatcatttcctgttcgtcggtgtgatgactgcccagaagtacctgaacagccgggctgtg
gcggctcatcggacgtgggcgcagacggttccaggacgtgtggagttcttctccagcgaa
ggctccgacacctctatacccattcccatcgtggctctgaagaacgtagatgactcttac
ccaccgcagaaaaagtccttcatgatgctaaagtacatgcatgaccattacctggacaag
tacgagtggttcatgagggccgatgacgacgtctacatcaagagtgagaagctggagagc
ttcctgcgcagcctcaacagcagcgaggccatctttctgggccaaacaggcatgggggcc
cgggaggagctgggtaaactagctctggagcccggggagaacttctgcatgggggggcca
ggggtcatcatgagccgcgaggtcctcaagaggatggtgccccacattcgagaatgtcta
caggagatgtacaccacccacgaagacgtggagatcggccgctgtgtcaggaggtttgcc
ggggtccagtgtgtctggtcctatgagatgcagcagctcttctatgagaactacgaacca
aataagaagggctacatacgagatctccacaacagcaagatccatcgagccatcactctc
caccccaacaaaagccctccttaccagtatcgcctacacagctacatgctgagccggaag
atcgcagacctgcgccaccgcaccatccagctccaccgggagatcgttcagatgggccgc
tatggagccaacgagcccagccgagaagacctccagctgggcatgccaccttcatttatg
cgcttccacccacggcagagagaggaagtgctggagtgggagttcctgacggggaagtac
ctcttctcatcatctgacaagcagccaccccgcagagccatggattcctcccagaggcaa
gccctggacgacatcatcatgcaagtgatggagatgatcaacgccaatgccaagacacgg
gggcgggtcattgacttcaaagaaatccagtatggctaccgcagagtgaatcctttatac
ggggcagagtatgtgctggatctgctgctgctgtacaagaagcacaaaggaaagaccatg
accgtgcccgtgaggaggcacgcctacctgcagcagaccttcagccagatccagttcaaa
gaggaagaggaaatggatgccagagctctggccagccacatcaacaaagattcagactcg
ctctcattcctgtccaactccctgaaaatgctggtgcccttcaagttggcctctggccca
gaccagaaggaacccaaagagaagaaggtcaacattttagtgcctctgtcgggacgctac
gacatctttgtgcgattcatggccaactttgaacgagtttgtctgatccccaaccagaac
gtgaagctgctcatcctgctgttcagcacggacaacaacacggagcaggtgaagcaggtg
gagctgatgagagagtatcacatgaagtacccccgatcggagatagagataaagcccatc
actggctccttctccagggccttggctctggaggtgggttctctgcacttctccaacgac
tctcttctcttctactgtgatgtggatcttctcttcaccagtgacttcctcaagcgctgt
cggaaaaacacagccccgggagagcaaacgtacttccccatcatcttcagccagtacgac
cccaaggtggtttatgctgggaaagtcccgagcaacaaccattacgtatttacctccaag
acgggtctgtggaggaactacggctttgggattgtctgtgtttacaaaggagacctggtc
cgagccggaggcttcgacacgtcgatacagggctgggggttggaggacgtggaccttttc
aataaatttgtccagtccgggctgaagttgttccgaagcacagacacggggatagtgcac
gttcaccaccccgtcatatgtgaccctaacctgggggtaaagcaatataagatgtgcctg
ggctccaaagcctcgtcgcacggctccagccagcagctggccgagctgtggctggagaag
aacgagcacggcttccggagagcggccagcaataacggctccgcgaggacagcgtga
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