Pseudochaenichthys georgianus (South Georgia icefish): 117465710
Help
Entry
117465710 CDS
T09629
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117465710 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
117465710
NCBI-ProteinID:
XP_033964577
LinkDB
All DBs
Position
20:complement(16156554..16236889)
Genome browser
AA seq
1916 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLTRL
PDGFTQLRTLAHLALNDVSLQTLPNDIGNLANLVTLELRDNQLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNLLEDVPDSIGCLKQLSIFKVDQNRLTQLTDSIGECENLTELVLTENL
LESLPRSLGKLKKLTNLNVDRNHLGTVPKELGGCACLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAQEEDDEAAAERRGLQRRATPHPNEL
KVMKKVIEERRNEAYTSRDEESPDSQEKRLSDLSNQSHDSQVSNSTLSATSHEERQNVTS
QREDLVDGHAPHYDDELDEMEVEYIEPTVHFAEEPIIRGLHDDDEEDREDGERSDEEERP
VFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFNPESMNSPTKPPEEEEEEEEK
EEEEEEEEEQGMCTPQHLPRMEALEDSRLQVNSSLVKGVKFDQVNNLLIEPARIEEEEHS
LIIMRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGVDL
HEAEHHTAVEALRSSGASVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRSSGIAFNI
ETAPKGPQERLSTCLMRNDKGLGFSIAGGKGSTPYRTADTAIYISRIAEGGAANRDSTLR
VGDRVISINGVDMTEARHDQAVALLTGTSPTIALVVERDLNAPGGSPGQSRARAHSPPPP
EPSDSPDQEEDGLTMHGNNLSRMEDEYPIEEVTLLKSGGPLGLSIVGGSDHASHPFGINE
PGVFISKVIPNGLACESGLRVGDRILEVNAIDLRHATHQEAVRALLANKQEIRMLVRRDP
SPPGMQEIEINKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDSRLKV
GMRILEVNNHSLLGMTHTEAVRVLRAVGDSLVMLMCDGFDPQKMTGVEASPGIIANPFAT
GIVRKNSMESISSIDRDLSPEEMEIMQKESEMVRETSQWEREEMEKVEHMRLEREEANRL
LEEETENMGTGPLKLDYKTLAALPTTSLQKLNRAPPSDFNRTESPIRDAPYSPTIQPPSH
HSSSSSLCGGRETRFANLHYTSTPTAIENSPSSTRPGAIQPVGRMRQSPSPGTPEGHSPN
PFQHGPSPFNSQTSPRAPSPTSPDEFPMNVKQAYKAFAAVPRSLAVLEPPQDQCGVRNNF
HPKEPSPEPELMNEVFDDVIDGQEGAGLSRHGSPRPLLSPDRREYLSLAAVPRLSRPSWD
LQSPSPGGRGSPEQRSFRDRQKYFEIDVKQQTPEKPKPRVSLVGEDDLKKMREEEERKFE
QRAREYLMDEDEEDEEEDLAKQMAQMKATGKVLLDGVEYNVEPVSTPTQHCPTPPCYNVT
PPSYCGSSGPSSVDGKGDSQRNSLEDSFRVEQRPNSMTGLIPAYTGDSAAPIRTAKAERR
HQERLRMQSPELSVASDKDLSPAEKRALEAEKRAMWRAARPCGLEDDVRQYEQDLAKRLY
QARVRASQGQDEAPQPPTSSSSSAASQLRMKSLEQDALKAQMVIAKSRDGKKRGTLDQLT
ESPSPAPTPSPTPMEELSPRGVTSPGRLSLSSKKFDYRQFAAIPSSKPVYDIQSPDAVEE
LQFIDDGSSNPVPAVSPEAEVPPPLPATSALGEMALYSNKRKLRQGRRSLETAVPT
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgttgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacagtccccgatgaggtattccgctacagtcgcagcctggaggag
cttctcctcgatgccaaccaactcaaagagctaccaaagcctttcttcagactacttaac
ctacggaagctcggcctcagtgacaatgagatccagagactcccccccgaggtggccaac
ttcatgcagctggtggagcttgatatttccagaaatgacattcctgagatccccgagagc
attaagttttgcagggccttggagatcgccgacttcagcggaaaccccctcaccagattg
ccggatggtttcactcaactgcgaacgctggctcacttggcactaaacgacgtgtcattg
cagacattgcccaacgacattggaaacttggccaacctggtgacgttggagctcagggac
aaccagctgaagtcgctgcctacgtccctctccttcctggttaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacaccctcggtgctctccctaaccttagg
gagctctggctggaccgtaaccagttgtcctcattaccaccagagctggggaacctccgg
agactggtgtgtctggatgtgtcagagaatcgtctggaggagcttccctcagagctgaac
ggcctcctggcgctcactgacctgctgctcacacagaacctgctggaggacgtcccagac
agcataggatgcctgaaacagctgtctatcttcaaagtggaccaaaacagactgacccaa
ctgactgattcaataggagagtgtgaaaacctcacagaactcgtcttaacagagaacctt
ttagagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccatttgggcaccgtgcccaaagagctgggcggctgtgcctgtctcaacgtcctc
tctctcagagacaatcgcctgggcaaactgcctgctgagctcgcagatgccactgagctg
catgtgctggatgtggccggaaatagattacaaaacctgccttttgccctgacaaacctc
aacctgaaggccatgtggctcgcagagaaccagtcacagcccatgctcaagttccagaca
gaggatgatgagcagacaggagagaaggtgctgacctgctatctactgcctcagcagcct
tcccccagcctcgagaacttgctacagaacagtgtggacgacagctggacggacagcaac
ctgaacagagtgtcagtcattcagttccaggaagagaccaaggctcaggaggaggacgat
gaggctgctgcagagcgcagaggtctccagcgaagagctacaccgcaccccaatgagctg
aaggtgatgaagaaggtgattgaggagaggaggaatgaagcttacacatccagggatgaa
gagtctcctgattcacaggagaaacggctcagtgacctctccaatcagagccatgactct
caggtgtccaatagcacgctgtcggccacctcgcatgaggagaggcagaatgtgacgtcg
cagagggaggaccttgtagatggccacgcccctcattatgatgacgagctggacgagatg
gaagtggagtacattgagcccactgtgcactttgcagaagagcccatcatccggggtttg
catgacgacgacgaggaggacagggaagatggagagaggagtgacgaggaagagaggcct
gtgtttcccgcagagaagcagcgtctgatcagaaaggacacgccgcactacaagaagcac
ttcaagatcaccaagctgcccaaacctgagaccgtggctgccctactgcagggcttcaac
cccgagagcatgaactctcccacaaagcctccagaggaagaggaggaggaggaggagaag
gaggaggaggaggaggaagaggaagagcagggtatgtgcacccctcagcaccttcccagg
atggaggcgctggaagacagtcggctccaggtcaactccagtctagtaaagggggtgaaa
tttgatcaagtcaataatctgctgattgaacctgctcgaattgaggaggaagagcactcg
ctgatcatcatgcgacagactggcggcctcggtatcagcattgctggagggaaaggatct
acaccttacaagggagatgatgagggaattttcatctccagagtatctgaagatggcccc
gccgcaagagcaggggtaaaagtgggagacaaactcctagaggtgaatggagtggacctc
cacgaagcagaacatcacacggcggttgaagctcttcggagctctggtgcttcagtttcc
atgtcggtgctgcgggagcatatggtggagccggagaacgccatcaccaccacgccactg
aggccggaagacgactatttcccccgcgagagacggagcagtggcatcgccttcaacata
gagacggctcccaaggggccacaggagcggctctccacctgcctgatgcgaaacgacaag
gggctgggcttcagcatcgcagggggcaaaggctccaccccctaccgcacagcagacaca
gcaatctacatctctcggatcgcagaagggggagccgcaaacagagacagcacactgcgt
gtcggcgacagagtgatctccatcaatggtgtagacatgacagaggccaggcatgaccag
gcagtagcactccttaccggcacctcccccaccattgcccttgtggtggagagagacctg
aatgcaccagggggctctccaggtcaatcccgggcacgagcccactcccctccaccccca
gaaccctcagactcaccggaccaggaggaggacggcctcaccatgcatgggaacaacctg
agccgcatggaggacgagtatcccatcgaggaagtgaccctgttaaagtcaggcgggcca
ctaggcctgagcattgtgggaggcagtgatcatgccagtcacccgtttggcatcaatgaa
cccggggtgttcatctcaaaggtgattcctaacggcctagcgtgtgaaagtggactgcgt
gtcggggaccgaattttggaagtgaacgccatcgatctgcgtcacgccacacaccaggaa
gctgtgcgagcgctgctggccaataagcaggagatccgtatgctggtgcggagggaccct
tccccgcctgggatgcaggaaattgaaatcaataagcagccaggggagaagctcggcatc
agtattcgtggaggggccaagggtcacgcaggaaacccctttgaccctacagatgaaggc
atcttcatctctaaggtgagttcgagcggtgctgcagcaagagacagcagactgaaggtt
gggatgcgtatcctggaggtgaacaaccacagcctgctggggatgacgcacacagaggcg
gtgcgagtgctccgggctgtaggagactctctggtcatgctgatgtgtgacggattcgac
ccacaaaaaatgacgggcgtggaggcctctcccggcatcattgccaacccatttgccacc
ggcatcgtccgtaagaacagcatggagagcatctcatctatagaccgagacctgagcccg
gaggagatggagatcatgcagaaggagtctgagatggtgagagagacatcacagtgggag
cgagaagagatggagaaagtggagcatatgcgcttggagcgagaggaggcaaaccgcctg
ctagaagaggagactgagaacatgggcactggacctttgaaacttgactacaaaaccctg
gcggctctgcccaccaccagtctgcagaagctcaacagggcgcctccttctgacttcaac
aggacggagagcccaatcagagacgccccctactcccccaccatccaaccgcccagccac
cactcctccagcagctccctgtgtggaggcagggagacccgctttgcaaaccttcattac
acttcaactccaactgctatcgagaactctccatcttcaacacgaccgggtgccatccag
ccagtggggcgcatgcggcagagcccctcccctggcacaccggagggccacagtcctaac
cccttccagcatggcccctcccccttcaactcccagacctctcctcgcgccccctccccc
acctcgcccgacgagttccccatgaacgtgaagcaggcatacaaggcgtttgccgctgtg
cctcgctcactggcagtgctggagcccccccaggaccagtgtggtgtcaggaacaatttc
caccccaaggaaccttctccagagcctgagttgatgaacgaggtgtttgatgatgtcata
gacggtcaggagggggctggtctgagccgccacggctcccccaggcccctcctctctcct
gaccggcgggagtatctgagcctggccgcagtgcctcgcctctccaggccgtcctgggac
ctgcagagtccctctcctggtggtcggggcagcccggagcagcgctccttcagggacaga
cagaagtattttgagattgacgtgaagcagcagacaccagaaaaacccaaacctcgagtg
tctcttgttggagaagatgaccttaagaaaatgagggaagaagaagagaggaagtttgag
cagcgggcgcgggagtacctgatggatgaagacgaggaggacgaggaggaggatctggca
aagcagatggcgcagatgaaggccaccggcaaggtgttgctggacggagtggagtacaac
gtggagccagtgtccacccccacccagcactgccctaccccaccctgctacaacgtcacg
ccgcccagctactgtggcagctcagggccttcttctgttgatggtaaaggagattctcag
aggaactcactagaggacagcttcagggtggagcagagacccaactccatgactggtctg
atcccagcgtacaccggggactctgcggcccccatccgcacagccaaagcagagcggcgg
caccaggaaaggctccgtatgcagagccccgagctgtctgtggcctccgacaaggacctg
tcccctgctgagaaacgagctctggaggccgagaagagagccatgtggagggcagcacgg
ccctgcggcctagaggatgatgttaggcagtatgagcaggacctggctaagaggctctac
caggccagagtgagggcgtctcagggccaggacgaggccccccagccccccacctcttcc
tcctcctctgcagcctcccagctcaggatgaagtctctggaacaggatgcactgaaagct
cagatggtcatcgccaagtctcgcgacggaaagaagcgtgggacactcgaccagctgacg
gagtcgccctcgcccgcccctaccccctctcccacacctatggaagagctcagtccccga
ggagtcacctctccgggtcggctgtccctgtcgtcaaagaagtttgactaccgacagttt
gctgccattccttcttccaaacccgtatacgacatccagtcccctgacgcagtggaagag
ctgcagttcatcgacgacggctctagcaacccagttcccgctgtgagccctgaggctgag
gtgccccccccgctgcctgccacctcggccctgggggagatggccctgtacagcaacaag
cgcaaactgaggcagggccgccgcagcctggagaccgccgtgcccacgtaa
DBGET
integrated database retrieval system
