Pseudochaenichthys georgianus (South Georgia icefish): 117465773
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Entry
117465773 CDS
T09629
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03030
DNA replication
pgeo03410
Base excision repair
pgeo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117465773 (fen1)
03410 Base excision repair
117465773 (fen1)
03450 Non-homologous end-joining
117465773 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117465773 (fen1)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117465773 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117465773 (fen1)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117465773 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117465773 (fen1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117465773 (fen1)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117465773 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
117465773
NCBI-ProteinID:
XP_033964677
LinkDB
All DBs
Position
20:4555192..4559564
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLTKLIADQAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNLLQNEDGET
TSHLMGMFYRTIRMLEYGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKQLAQAQEMGEQ
ENIDKFTRRLVKVTKHHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFGTATEDM
DGLTFGTNILLRHMTASEAKKLPIQEFHFSRILQDIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDTKKHPPPEDWLYREARALFLNAEVVDCTTVDLKWGE
PDEEGLIQYMCSEKQFSEDRIRNGCKKISKSRQGSTQGRLDSFFSVTGSLSSKRKEPELK
GSAKKKQKTGATPGKFKKGR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacgggcttactaaactgatcgctgatcaggcccctggtgccatcaaagag
caagacatcaagaactactttggtaggaaaattgcaatagatgcctccatgtgtatctac
cagttcctgatcgctgtgagacaggacgggaacctactgcagaatgaggatggcgagacg
acgagccacctgatgggaatgttctaccggacgatccgcatgctggaatatggaatcaaa
cctgtgtacgtgtttgacggaaagcccccacagctcaagtcagcagagttggagaagcga
ggggagaggagggcggaagctgagaaacagcttgctcaagctcaggaaatgggggagcaa
gagaatatcgacaaattcaccaggcgtctggtaaaagtgaccaagcatcataacgacgag
tgcaagaagctgctgaccctgatgggagtgccctacgttgaggctccgtgtgaggcggag
gccagctgtgctgctctggttaaagcagggaaggtgtttggaacagcaacggaggatatg
gacgggctgacctttgggacaaatatcctgctcagacacatgaccgccagtgaagcaaag
aaacttcctatccaggagttccacttcagtcgcatcctgcaggacatcggcctcaccaat
gaacagttcatagacctgtgtatcctgctgggctgtgactactgtggcaccatcaaggga
atcggtcccaagagggccatcgacctgatcaagcagcacggcagcattgaggagatcctc
gaaaacatcgacaccaagaagcacccccctccagaggactggctgtacagagaggccaga
gctttgtttttaaatgcagaagtggtggattgtaccactgtggatctgaagtggggggag
ccggatgaggaggggctgatccagtacatgtgtagcgagaaacagttcagcgaggacagg
atccgtaacggctgtaagaagatctccaagagccgacagggcagcactcagggacgactc
gactctttctttagcgtcaccgggtctctgtcctccaagcggaaggaacctgagcttaaa
ggatctgcaaagaagaagcagaagaccggagccacgccaggcaaattcaagaagggaaga
tag
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