Pseudochaenichthys georgianus (South Georgia icefish): 117465951
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Entry
117465951 CDS
T09629
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117465951 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117465951 (smarcd3b)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117465951 (smarcd3b)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117465951 (smarcd3b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117465951 (smarcd3b)
PBAF complex
117465951 (smarcd3b)
GBAF(ncBAF) complex
117465951 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
117465951
NCBI-ProteinID:
XP_033964955
LinkDB
All DBs
Position
20:complement(16397174..16432851)
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AA seq
515 aa
AA seq
DB search
MATEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PTPVMEPSRKRPAPSQQVQQQAVQGRARKKPVGFPGANEMPARQMDMREPQSDPTLGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKRKL
RLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELDKDLY
GPDNHLVESLYGGSLLQWHRTGTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPR
LARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQR
LTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEIATL
DNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAE
FYHEPWSQEAVSRYFYCKIQQRRQELETALAVRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggacacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcttggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggccccccgtacggaggcagcccggcagtgcggcccggcctg
cccacccccgtgatggagcccagccgtaagaggcctgctccctcccagcaggtccagcag
caggccgtccagggtcgtgccagaaagaagccagtcggattccccggagccaatgagatg
ccggcgaggcagatggacatgagagagccccaatcagatcccacgctcggatcaaatgct
aagagaaggaaaatggcagacaagattcttccgcaaaggatccgtgagctggtgccagaa
tctcaggcttacatggatctgctggcgtttgagcgcaaactggaccagaccataatgcgc
aaacgagtggacatccaggaagcactgaagagaccaatgaagcagcagaagcgtaaactg
aggctttacatatccaacaccttcaaccctgcaagaccagacgctgatgactcagacggc
agcattgcatcatgggaactgagagtagagggcaagttgctggatgacccggggaagcag
aaaaagaagttctcctcgttttttaagagcctggtgatcgagctggacaaagacctgtac
ggtcctgacaaccacctggttgagtcattgtatggtggctcgcttttacagtggcaccgc
acgggcaccacgcaggagacggacggcttccaggtgaagaggccgggggacgtgagcgtg
cgctgcaccctgctgctgatgctggactaccagcccccccagtttaagctggaccctcgt
ctggcgcgcctgctgggcatccacactcagacccgctcctgcatcatccaggcgctctgg
caatacgtcaagaccaacaagctgcaggactctcatgacaaggagtacatcaactgtgac
aagtacttccaacagatcttcgactgccctcggctgaagttctctgagatccctcaacgc
ctcaccaacctcctcttgcccccagaccccatcgtcatcaaccatgtgatcagcgtggat
cccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggaagaccccctg
aaggggcagatgagcagcttcctgctctccaccgccaaccagcaggagatcgccaccctg
gacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccagagggacttc
atgctcagtttctccagagaccccaagggctacatccaggactggctcaaatcccagagc
cgggaccttaagttaatgacagacgtggtggggaaccctgaggaggagaggagggcggag
ttttaccacgagccctggtcccaggaggctgtcagccgctatttctactgcaagatccag
cagaggagacaggagctggaaacggccttagctgtccgcaacacctaa
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