Pseudochaenichthys georgianus (South Georgia icefish): 117466036
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Entry
117466036 CDS
T09629
Symbol
pard3aa
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
pgeo04517
IgSF CAM signaling
pgeo04520
Adherens junction
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117466036 (pard3aa)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117466036 (pard3aa)
09144 Cellular community - eukaryotes
04520 Adherens junction
117466036 (pard3aa)
04530 Tight junction
117466036 (pard3aa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117466036 (pard3aa)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117466036 (pard3aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117466036
NCBI-ProteinID:
XP_071063081
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All DBs
Position
20:7315974..7611098
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AA seq
1401 aa
AA seq
DB search
MAERTVKPSSQQQLQLMLSHEAACLAFSSRANVFVLSLTGTGKPLWYRDTDNRDPSYWIQ
VHRLEHGDGGILDLDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFVSG
MSSASVFQPYQTTSEIEVTPSALRSSMPLHVRRSSDPSLADLVPGEVPVGPEEPSRKNPA
RWSTTVGFQKHKHKPNVTAGPGTGSLERKGRGGNAYRSLPRDTSGWPAQFQREVTRSSLS
ANHPMVDRWLDRQEQEEEEEEEEERRRQERRIERIEPVGRADSSLEHSPGFSLESLLKPV
EVSNGGGPLGIHVVPLSSHDIRTQGLLVKRLEPGGKAEQERLFQENDCIVKINQGDIRHL
RFEQAQNIFKQAMRGQSILFHVIPAAFKRHYEILFIQSELSPPHPNRVRFSQDSQPPMDR
SSLSLVGGMTPRTGPQPGFDHDHPPPLAGSTPEMRRRCATLPHTLVSRTSSAPSPSLQRR
VSTNPSNSTYVKNKGRRFNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQD
GRLKAGDRLLEVSGVDLNGKSQEEVVALLRATPMGGTVNLLVIRPEDSLLPREVQAEEDD
IVLTPDGTQEFMTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGR
LRVNDQLIAINGESLHGMTNQDAMETLRTSMSVEGNIRGMIQLIVARHVSKNNEEAPGSP
PVLMNPVNPLLDNHERRISNSLYESIDSLENHTKPQANTIGRIGNHQLSPTVNMPQDDIV
MIEDDRPPVLPAHLSDQSSSSSHDDMGFVGENPVTWLHELPGQDECSLSPDANPDASFQR
EGFGRQSMSEKRIKQFENAAELEIVKTRKSKSMDLVADEINCSTRTNEGSKEQDVGPSLG
LKKSSSLESLQTAVAEVTQNGEIKVNRPRSRILRGRGCNESFRAAIDKSYEKPGTTTPEE
ENSMETLDEDMEESSRSGRESMSTSSDLNLGPGMNGNLSKDDRQKDKVGGKEKKKPERDK
ERERDKSKAKKGVLKGLGEMFRFGKQRPGDKMERKGSSKSKAEDMQASEDETQRMRLEQE
RIQAKKLELRERQEKEREYAEIQDVVGGTFSSDEEPTYAGIGSLDSSMDSSSMEPYNHHY
HLPQSPLSPPLPISHQENGPPLEALYAQVNKPRNGRPAAPDSSQMAPSNHDRIVRLRNEF
QHARHEDDVDDHRHTYSFNQSWSSNGMEPLSGRHSVNVDSQQPQEDDFQQAQRQFSSLPR
PPHKTPSTESQDSWDKVYMPEEGLQPSKENPRHPSGQGSRNGYLGTSNFNARALLETQEL
LRQEQRRREQEAKSRPASMQETPSSITYDHSREHTQAPGPAPMQAAPQTKGPYRQDVPPS
PSQLAKLSRLQGSEKGRLFYS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgaacggtgaaaccttcatcgcagcagcagctccagctcatgctgagccat
gaggcagcatgtctggccttttcctcgagggcaaacgtctttgtgttgtctttgacagga
acaggcaaaccactgtggtacagagacacagataatagggaccccagctactggatccag
gtacacaggttggagcatggagatggaggcattttggacctggatgacatgctctgcgat
gtggtggatgacaaagataggctggtagctgtatatgaagagcaggatcctcacaatgga
ggggatggtaccagtgccagctccaccggtacgcagagtcccgaacccttcgtcagtggc
atgagttcggcgtcggtctttcagccctaccaaaccaccagtgagatcgaggtcaccccg
tccgctctgcgatccagcatgcctctccatgtccgtcgcagcagtgatccctctctggct
gacctagttccaggcgaagtcccggttggtccagaggaaccgtccagaaagaacccagca
cgatggtccaccacggttggtttccaaaagcacaagcacaaaccaaacgtaaccgccggc
ccaggcacaggcagtctggaacgaaagggtagaggaggcaatgcctatcggagtcttcct
cgtgacacgagtggctggcccgctcagttccagagagaagtgactcgatcctccctaagc
gcaaaccatccgatggtggacaggtggcttgacagacaggaacaggaggaggaggaggag
gaggaagaagagcgaaggagacaagaaaggaggattgaacgtatagagccagtagggagg
gctgattcttcactggaacattcacctgggtttagtctagaaagcctgctcaagccagtc
gaagtgtccaatggaggagggcccctggggatccacgtagtgccgctcagttcccacgat
atcaggacgcaaggcttgctggttaagcgtctggagccagggggaaaagccgagcaggag
cgactcttccaggagaacgactgtattgtcaaaatcaaccagggagacattcgccaccta
cgctttgaacaagcccagaacattttcaagcaggcgatgcgtggccagtctatcctcttc
catgtcatccccgcggccttcaaaagacattacgagatactgtttatccagagcgagctc
agcccgccccatcccaacagagtccgctttagccaagattctcaaccgccgatggacagg
tccagtcttagtcttgtgggggggatgacacccagaactggaccacaaccaggcttcgac
catgaccacccgccgccactggcaggaagcaccccagagatgagacgacggtgcgccacg
ttaccgcacaccttggtctccaggacctcctctgccccctccccctccctgcagcgcagg
gtgagcacaaacccgtccaacagcacctacgtaaagaacaaaggacgcagattcaacatc
cagctaaagaaaggtcctgagggtcttggcttcagcatcacatccagggacgtccccatt
ggtggcagcgctcccatttatgtcaaaaacatccttcctcgaggggccgctatccaagat
ggccgattgaaagctggagaccggctgctggaggtaagtggcgtggatctgaatggaaag
agccaggaagaggtggtggccctgctccgagccacgcccatgggagggactgtgaacctg
ttggtgattcgcccagaggactccctgctgcccagagaagtgcaggcagaagaggacgac
atcgtgttaacccctgatggtacacaggagttcatgacctttgagatccctctaagtgac
tctggctcagcaggcctgggggtcagcgtcaaggggaaccggtccaaggagaaccacgct
gacttgggcatctttgttaaatccataattaatggaggtgctgctagcaaggatggccgt
ctacgagtcaatgaccagctcattgcaatcaatggggagtcgctgcatggtatgaccaac
caggacgccatggaaaccctgcgcacatccatgtctgttgagggcaacatacgagggatg
attcagctcatcgtggcccggcatgtgtccaaaaacaatgaggaagcccccggaagccct
ccagttttaatgaatcctgtgaaccctctactggacaaccatgagcgccggatttcaaac
tccctgtatgaaagcattgacagcttggaaaaccacaccaaaccgcaggctaatacaatc
ggacgcattggtaaccaccagctgtctccgacagtgaacatgccgcaggacgacatagtg
atgatcgaagacgataggccgcccgtgcttcctgcccatctttccgaccaatcatcctcc
agttcccacgatgacatgggctttgtgggagagaacccggtgacctggctccacgagctg
cccggtcaggatgaatgctcgctcagtccagacgcaaaccctgacgcatcgttccagagg
gagggcttcggacgccagagtatgtctgaaaaacgcatcaaacagtttgagaatgctgct
gagttggagatcgtcaagacgcgcaagtccaagagtatggatctagtagcagatgagatt
aactgcagcacaagaacaaatgaaggttctaaagaacaagatgtgggaccatcgctgggc
ctgaaaaagtcaagttccctggaaagcctccagacggctgttgctgaggtgacgcagaac
ggtgagatcaaagtcaacaggccccgctcacggatcctcaggggccgcggctgcaacgag
agcttcagagctgccattgacaaatcatacgagaaacctggtaccacaacaccagaggaa
gaaaacagcatggagacattggacgaggacatggaggaaagctccagatcaggtcgcgag
tcgatgtccaccagcagcgacctcaatttgggaccagggatgaacggcaacctttccaaa
gatgacagacaaaaagacaaggttggaggcaaggaaaagaaaaaacctgaacgggataaa
gagagggagagagacaagagcaaagccaagaaaggcgtgctgaagggcctgggcgagatg
ttcaggtttggaaaacagcgaccaggagacaagatggagaggaagggctccagtaaatct
aaagctgaggacatgcaggcgtcagaggacgagacccagcggatgaggctggaacaagag
agaatacaggccaaaaagctggagcttcgtgaaaggcaggagaaagagagggaatatgct
gagatccaagatgttgttggcggtacattcagctcagatgaggagcccacctacgctggc
atcggatctttagactcgtcgatggatagcagcagcatggaaccttacaaccaccactac
catctcccgcagagtcccctgagtcctccccttcccatcagccatcaggaaaatgggcca
cccttggaggctctgtatgcccaggtcaacaagccacgcaatggacgccctgcagctcca
gacagcagccagatggctcccagtaatcacgaccggatagtgaggctgaggaacgagttc
cagcatgccaggcacgaggacgatgtggacgaccacaggcacacctacagcttcaaccag
tcctggtcgagcaatgggatggaaccactaagcggacgccattcagtaaacgttgactcg
cagcagccgcaagaagatgacttccaacaagcacagagacagttcagctccctgccacgg
ccaccccataagacccccagcacggagtcccaggactcgtgggacaaggtgtacatgcca
gaagagggactgcagccatccaaggagaaccctcgccacccctccggccaggggtcacgt
aacggatacctggggacgtccaacttcaatgctcgtgccctcttagagactcaggagctg
ctgaggcaggagcagaggcgcagagagcaggaagccaagtccaggcctgcctccatgcag
gagacccccagcagcatcacctacgaccacagcagagaacacactcaggcccctggcccc
gccccgatgcaggccgctcctcagaccaagggcccctacagacaggacgtacccccgtcg
ccctctcagctcgccaagctcagcaggctgcagggctcagagaaagggaggctgttctac
tcttga
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