Pseudochaenichthys georgianus (South Georgia icefish): 117466208
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Entry
117466208 CDS
T09629
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117466208 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117466208 (u2af1)
Spliceosome [BR:
pgeo03041
]
Complex A
U2 snRNP components
U2 related factors
117466208 (u2af1)
Complex B
117466208 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117466208
NCBI-ProteinID:
XP_033965230
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Position
21:25137276..25144862
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AA seq
246 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSQSRERRSRSRDRGRGGGGGGGGGGGGGGGGGRDRERRRSRDR
ERSGRF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatacttggcgtccatttttgggacagagaaagataaggtcaactgctcgttt
tattttaaaattggtgcctgccgacatggtgaccgctgctccagattacacaataaacca
acattcagccagacaattgccctcctgaacatttacaggaaccctcagaacagtgcccag
tctgctgatggcctcacctgtgccatcagtgacatggagatgcaggagcactatgatgag
ttttttgaggaggtcttcacagagatggaggaaaagtatggagaggtggaggaaatgaac
gtgtgtgacaacctcggtgaccacctagttggaaatgtgtatgtcaagttccgttatgaa
gaggatgcggagaaggctgtgatagacctgaataatcggtggtttaatggacagcccatc
catgctgagctgtctcccgtaacagacttcagagaagcgtgttgtcgccaatacgagatg
ggggaatgtactcgtggtggcttctgtaacttcatgcatctgaagcccatctcacgggaa
ctcaggagggagctctatggtcgtcggaggaagggccgccataggtcccggtctcaatcg
agagagaggcgatctcgctcaagggacagaggtcgaggaggaggaggaggaggaggtggt
ggaggaggaggtggaggaggaggtggccgtgaccgtgagagacgtcgctctagagacaga
gagcgctcaggacgattctga
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