Pseudochaenichthys georgianus (South Georgia icefish): 117466279
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Entry
117466279 CDS
T09629
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117466279 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117466279 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117466279 (myo1b)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117466279 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117466279 (myo1b)
04147 Exosome [BR:
pgeo04147
]
117466279 (myo1b)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117466279 (myo1b)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Others
117466279 (myo1b)
Others
Actin-binding proteins
Myosins
117466279 (myo1b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117466279 (myo1b)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117466279 (myo1b)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Proteins found in most exosomes
117466279 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
AAA_16
nSTAND3
AAA_22
TPR_Nup160_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117466279
NCBI-ProteinID:
XP_033965321
LinkDB
All DBs
Position
21:complement(15131115..15209378)
Genome browser
AA seq
1166 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDSFIANLRNRFDHNEIYTYIGSVVISMNPYRSLPI
FTPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVVKQPRGERNFHIFYQLLSGASDDTLKKLKLDRDFSKYNYLSLDSAAVN
GLDDAANFRTVRNAMQIVGFMEDEVQSVLELVAAVLKLGNIEFKPESRCNGNDESRIKDK
NDLKEMCELLGTEQTVLERAFSYRTVEAKQEKVCTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAAPKSRHKVMGVLDIYGFEIFEENSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAIICDLIENHQNGILAMLDEECLRPGTVTDETFLDKLNTIC
AEHLHFESRLSKSSKFLTDHSLPHNCFRIQHYAGKVLYRAEGFVDKNNDLLYRDLSQAMY
KANHSLMKQLFPEGNPAKVNLKRPPTAGFQFRHSVGTLMRNLQTKNPNYIRCIKPNDKKA
SHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQAYEPCLERYKMLCKRTWPHWRGPAREG
VEVLMGDLTVPAEEFSYGRSKVFIRNPRTLFFLEERRRQCLQDLATLIQKIYRGWKCRSH
FLLLKKSQIVVAAWYRRYAQHNKYKRIKSATIVVQSYTRGWQARKLLRELKYQKRCEEAV
TTISAYWHGTQARMELRRLKQEARNIRAVTVIWAYWQGTKARRELRQLKEEARNKHAVSV
IWAGWQGTKARRELRRLKEEARRKHAVAVIWAYWKGLKVRREYRKFFRANAGKKIYNFTI
QRIMQKYFLGLKSTMPSMSPIDKSWPVKPYLFLDGVHSDLRRIFHLWRCKKYRSEFTEEK
KAVFEEKLEASEIFKDKKALYASSVSQPFMGDYLEISKNPKYQKLNSAMDEKVLLADVVN
KINRANGKGTARIFLLTKNSVVLADQKTGQVKASVPLPDLTSVSVSTQSDGFFALKLKEG
SASAIKGDFLLSSEHLIEIITKLHRTGATAADSEQLNIDISDEFLVQFKHDKVCVKFIQG
GPKNGNSVSCKRKNNRLLEVSVPSTV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacgtcccttctggacaacatgatcggggttggagacatggtcctccta
gaacccctgtctgaagactcgttcatcgcgaacctgaggaaccgctttgaccacaatgag
atctacacatacattggcagtgtggtgatctccatgaacccctacaggtccctgcccatc
ttcacaccagaaaaagtggaggagtatcgcaacaggaacttctacgaactcagtccacac
atctatgctttggcagatgaggcctatcgctcactgagggaccaggacaaggaccagtgc
atcctcattacaggggagagtggggctgggaaaactgaggccagtaagctggtgatgtca
tacgtggcagcggtgtgtgggaagggccaggaggtgaacaaggtcaaggaacagctgctg
cagtccaatcccgtgctggaggccttcggaaatgccaaaacggtgaggaacgacaactct
tccagatttggaaagtacatggacattgagtttgacttcaaaggagatcctctgggtgga
gtcattagcaactatctgctggagaagtcacgtgtggtcaaacagccgaggggagagagg
aacttccacatcttttatcagctcttgtccggcgcctccgatgacacactcaagaagctg
aagctggatcgggatttcagcaagtacaactacctgagtctggactctgccgccgtcaac
gggctggatgatgcggccaacttcaggacagtcagaaatgccatgcagatcgtgggcttc
atggaggacgaggtgcagtcggtgctggagctggtggccgccgtgctgaagctcgggaac
attgagttcaagccggagtcgcgctgcaacggcaacgacgagagccgcatcaaagacaaa
aacgatttgaaggagatgtgtgagctgctggggaccgaacagacggtgctggagcgagcg
ttcagctaccgcacagtggaggctaagcaggagaaagtctgcaccacactgaacgtggca
caggcctactatgccagagacgcccttgccaaaaatctctacagtcgcctgtttagctgg
cttgttaccaggatcaacgaaagcattaaagcagcaccgaaatcccgccacaaggtcatg
ggtgtgctcgacatctatggctttgagatattcgaggaaaacagcttcgaacagttcatc
atcaactactgtaacgaaaagctgcagcagatcttcatcgagttgaccctccgcgaggag
caggaggagtacgtcagagagggcatcgagtggaccaatattgaatatttcaacaacgcc
attatctgcgacctgatagagaatcaccaaaatggcatcttggccatgttggacgaggag
tgcctgaggccggggacggtcaccgatgagaccttcctggacaaactgaacaccatctgc
gctgaacacctgcactttgagagtcgcctcagcaagagttcaaagttcctcactgaccac
agcctgcctcacaactgcttccgcatccaacactatgccggcaaggtgctttaccgcgcc
gagggcttcgtagacaagaacaacgacctgttataccgggacctgtcgcaggccatgtac
aaagccaaccacagcctcatgaaacagctgttccctgagggcaaccccgctaaagtcaac
ctgaagagaccgcccactgctggattccagttcagacattcagtcgggacgctcatgagg
aacctgcagaccaagaaccctaactacatccggtgcatcaagcctaatgacaagaaggcc
tcccacatcttcaccgactccctggtctgccaccaggtgcgctacctgggcctgatggag
aacgtgcgtgtgcggagagccggctacgccttccgccaggcctacgagccgtgcctggag
cgctacaaaatgctctgcaagcggacctggccccattggagagggcctgccagggaagga
gtggaggtactgatgggtgacctcacggtcccagcagaggagttctcctacggtcgctcc
aaggtcttcatcaggaacccaagaacgctcttcttcctggaggagaggaggaggcaatgc
ctacaggacctggccacgctcattcagaagatctaccgtggctggaagtgtcgcagccac
ttcctgctgctgaagaagagtcagatcgtggtggcggcatggtatcgccgatacgcgcaa
cacaataaatacaaacggatcaagagcgccaccattgtggtgcagtcctacactcgggga
tggcaggcacgcaaactcctgagagagctgaaatatcagaagagatgtgaggaggcggtg
accaccatctctgcctactggcacggcacacaggctcggatggagctgaggcgtctaaaa
caagaagcgcggaatatacgcgctgtgacagtaatatgggcatactggcagggaaccaag
gcccggagagagctgcgtcagctgaaggaggaggcgaggaataaacacgccgtgtcggtc
atttgggccggctggcaaggcaccaaggctcgcagggagctgagaagactgaaggaggag
gccaggcgtaagcacgctgtcgctgtcatttgggcctactggaagggactcaaggttcgc
agagagtacagaaaattcttcagggcaaacgcaggcaagaagatctataacttcaccatc
cagaggattatgcagaaatatttcctgggcctgaagagcaccatgccctccatgtccccc
atagacaagagctggcctgttaagccttacctcttcctggatggagttcactcagacctg
cggagaatcttccatctctggaggtgcaagaaatacaggagcgagttcacagaggagaag
aaggctgtgttcgaggagaagctggaggccagtgagatcttcaaagataaaaaggctctc
tacgccagcagtgtgagccagcccttcatgggagactacctggagatcagcaagaacccc
aaatatcagaaactgaacagcgccatggacgagaaggtcctgctggctgacgtggtcaac
aagatcaacagggccaacggcaagggcacggctcggatcttccttctgactaagaacagc
gtggtgctggccgaccagaagacgggtcaggtgaaggccagtgtccctctgccggacctc
accagcgtgtcggtcagcacgcagagcgacggcttcttcgctctcaaactcaaagaggga
tctgcctcagccatcaaaggagacttcctactcagcagcgaacatctgatcgaaatcatc
accaaacttcaccgcactggggccacggctgcagacagcgagcagctcaacatcgacatc
tcagacgagtttctggtgcagttcaaacacgacaaagtctgcgtgaaattcatccaggga
ggtcccaagaacggcaacagcgtgtcctgcaagcgcaagaacaaccgcctgctggaggta
tcggtgccttcaacggtatag
DBGET
integrated database retrieval system
