Pseudochaenichthys georgianus (South Georgia icefish): 117466281
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Entry
117466281 CDS
T09629
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117466281
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117466281
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117466281
NCBI-ProteinID:
XP_033965327
EnsemblRapid:
ENSPGEG00000008344
LinkDB
All DBs
Position
21:27403542..27416648
Genome browser
AA seq
1091 aa
AA seq
DB search
MRLSVPFFFLLWVQALTLKNLNYSVPEEQGPGTVIGNIANDAGYGTMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGDNGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINIRVTDSNDNSPVFEKSSYV
IEILENSPAGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGEVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSIVRVNVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRTAHALWEEVAPVVELVVKVTDHGKPPLSAVAKLIIKANT
ETAAGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTDTPANRMSVIQTENFPSEPNYAGSRQPF
VQSSTFKDAEQASLRDSGHGDSDQADSDQDTNKGSQCDTSAREALKMKATAINGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESLSASNSPTKSSLPLDLANQE
SKEEREGGSDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSAISQECGGL
DFALDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtgccctttttctttttgctgtgggttcaagccctgacattgaaaaat
ctcaattattctgttccggaggagcaaggacccggcactgttataggtaatatagcaaac
gatgccggatatgggaccatggagagggggaaaaaatccaacttcagagtactggagaat
tctgctccacatctggtggatgttgacccagagagtggactaatcttcacgaaacaaagg
attgacagggaaacattatgcaggcgcaatccaaagtgccagctctctatggaggtgttt
gcaaatgacaaggaaatatgcatgatcaaaattgatatacaggacataaatgacaactcg
cctagttttccctcagatcatgttaatatagatatttcagaaaacgctgctgctgggaca
cgcttccccctgactattgcacatgactctgattctggggacaatgggataaagacttac
caggtcacaagagatgattacaatacattttctttggatttaaaagtgaggggcgatggg
actatatatccagagctggtggttcagagacctctggatagggaggatcagagtcatcac
acactcctcctcacagcaattgacggtggggagtatccaagatccggctccatgcaaatc
aacatcagagtgactgattcaaatgacaacagcccagtttttgaaaaatcctcttatgtg
attgagattctggagaattcaccggccggaaaaatacttatagatttaaacgccactgac
caagatgagggaagcaacgggcaggtggtctattccttcactggatatgcatctgaaaga
atccaagatttgttttccattgacccaaatactggcgtaatcaaggtccagggagaaatt
gactttgaagagaatccaatcatagagtttgatgtacaggctaaggatctcgggcccaac
ccgataccaggacattgtaaaattacagtcaaagtgcttgacaaaaatgacaactcgcca
ataataagttttgtctctgtacggcagggagccatcagtgaggcagcacctccagaatct
gtcatagcgctagtgagagtgacggataaagactctggccgaaatggccaacttcaatgc
agggtgctaggtaatgtacccttcagactgcaggaaaacaatgataatttttacactctg
ctcacagacagacccctggacagggaaatgaaggatgaatacaatgtaacaatcgtggcg
agagacaatgggataccttctttgaactacactaagtcgtttactgtgaaaatcttggat
gagaatgacaatgcaccacgctttacaaagacagtgtacgtgctacaggtgcctgagaac
aacatcccaggggagtatttgggctctgttctggcccacgacccagatgtaggtcgaaat
ggaacagtgtcatactccattctgccttcacatataggagaagtttcagtgtatacctac
gtgtctgttaatcccaccaatggagccatatatgcctcacgctctttcaattatgagcaa
actaaatcctttgagttcaaagttcaagctaaagatggaggatcccctcacatggagagc
acctccatagtcagggtcaatgtccttgacgtaaatgacaatctcccagttattattttg
ccactcctgcagaatgatacagcggaaatcccagtgcctagaaatgtaggtatcggatac
atagtggctacagtgaaagcagtggaccatgaccacggagaaagtggacatttgacctat
gagatcacagagggaaatgatgaccacctgtttgagatggatccggtgggaggggaggtc
agaactgctcatgctctctgggaagaggtcgccccagtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtggctaagctgatcattaaggcgaacaca
gaaacggcagcaggagggggttccagcgcgagcggagaacagcagcactgggatgtatcc
ctgccccttatagttaccctctgcattatctctgtcatgctcttagcagtcatgaccgcc
atcgctgtcaagtccaaacatcaagataaggagactgggaattataactgccgcatggct
gagtactccaatcctccagtggggaaaggcaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggaaagagattctgcgagccggatgaatgtggtgagc
agtccttctctcatcacttcaccaatatgttttgactaccagagtcctctgccactcaca
ctgcccaggtcagaggtcatgtacctgaaaaccactccaaacagcctgacagtcccccgg
gcaggttgccactccagctttgccgggcttagtacagacactccagcaaataggatgtca
gtgatacagactgaaaatttcccctcagagcccaattatgctggcagcagacagccgttt
gttcaaagctcaacatttaaggatgcagaacaagcaagcctccgagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacagtgcgacacgtct
gctagggaggccctcaagatgaaagcaacagcaattaatggccagcctttcgagcaggag
caagacaaatcagtccactgcacagacgaatgccgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgtaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
agcagcagaaaaaccctcagcacgtttggaaaggaacagcgggacagtacaatcctcgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctacaggagagt
ctctctgcctccaatagtcccaccaagagtagtttgcccctggacttggccaaccaagag
tccaaagaagaaagggaggggggctcagacagcagtgcctatgggcctccagatggtcag
tgctcccccctgcacaccgagttagaggagccctcctatctgacctgcgagctcaggcct
aagtccctgtccagcagcctcatccacagctccgccatcagccaggagtgtggggggtta
gattttgcgctcgatccgagggactctggcaactga
DBGET
integrated database retrieval system
