Pseudochaenichthys georgianus (South Georgia icefish): 117466289
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Entry
117466289 CDS
T09629
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117466289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117466289
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117466289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
117466289
NCBI-ProteinID:
XP_033965338
LinkDB
All DBs
Position
21:18200844..18257901
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AA seq
253 aa
AA seq
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MSNKTEINLTGVKQSQTVWLVKVPKYLSHQWDKASEKGEVGKITIGKKQGKTEVSFRLNV
ELTTMGAVGEKDGSVLVPRDHPFTMQTVGGQTLAVYSQSDSDGISLEGMVVHRAECRPVV
NDNYMKLKKLQLQESTKPQRLSQQLEKAVTTIFKPVANHDFNLEHDKKKKSEGKMVRAER
QVVLDMCFSAFEKHQYYNIKDLVDITKQPVTYLKEIMRDIGTYNSKGAHKSTWELKPEYR
HYQSAEEEEMQTA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaacggagattaatctaactggagtcaaacaaagtcaaaccgtgtggctt
gtgaaggttcccaagtatttatctcaccaatgggacaaggcctcagaaaagggagaagtt
ggaaaaataaccattggaaagaagcaagggaaaacagaggtgagtttccgtctgaatgtg
gagctgaccaccatgggcgctgtgggggagaaggatggttcagtgctggtcccgagggat
catcccttcaccatgcaaactgtgggcggacagaccctggcagtctacagccagagcgat
tcagatggcatcagtctggaggggatggtggtgcacagagcggaatgcagaccggtcgtc
aatgacaactacatgaagctgaagaagctgcagcttcaagagtccaccaagcctcagcgt
ttgtctcagcagctggagaaagccgtcaccaccatcttcaagcctgtggccaaccatgat
ttcaacttggagcacgataagaagaagaagtcagaggggaagatggtgagggccgagcga
caggtggtgttggacatgtgtttctctgcctttgagaagcaccagtactacaacatcaag
gacttggtggacatcaccaaacaacctgtgacctacctgaaagaaatcatgagggatatc
gggacgtacaacagcaagggggctcacaaaagcacctgggagctgaagcccgagtacagg
cactaccagtctgctgaggaggaggagatgcagactgcctga
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