Pseudochaenichthys georgianus (South Georgia icefish): 117466332
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Entry
117466332 CDS
T09629
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117466332 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117466332 (si:ch211-199f5.1)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
117466332
NCBI-ProteinID:
XP_033965424
EnsemblRapid:
ENSPGEG00000008341
LinkDB
All DBs
Position
21:complement(27352546..27356397)
Genome browser
AA seq
989 aa
AA seq
DB search
MKLLTKGNITTEMIRGKCITYCHRWIFLFLIHPFLFASLVQSEGNTIRYQSYEEDAPGTV
IGNLAKDMSLSLSHSSKTNFRMMKQFNDSFIRVRESDGELTVGERIDRERICRHTPQCLI
TFDVVHFSKERYRLIHVEVEIKDINDNSPEFPNKESVVEISENAAVGSRIPLDPAADADV
GSNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVELVATDGGNPYR
SGSTKITIKVTDFNDNSPVFDQNSFSVSLPEDAPVGAVILDLNAVDADEGLNGEVAYGFG
KQVSHEIRELFQVDNKSGRLTLRSPVDFEDKSTYELDVQATDLGPNPTPSVCKIIIHVTD
VNDNAPEISITPMTSISTGIAYISESAEKDSLVALISTLDRDSGVNSQVHCTLYGHDHFK
LRQAYEDSYMIVTAAALDRERISEYNLTVMAEDFGSPALRKITQYTIRLTDENDNAPHFT
KAVYEVSVVENNAPGAYITTVQASDADLNNNGKITYRLVDSVIMGSPVNTFVSLNSVSGS
IYALRSFNYEVMKLLDIHIKASDGGSPQLQSTAVIRLIIVDQNDNQPSIIEPPLYKGSAG
IFLPKDAPAGYVVTQIKATDADEGINAQLSYKITDGGHLGFSVNKDTGKVHVSRQLMYDL
TDNVKVTVAVSDNGSPALSSTAIIHFSFIEGTVPSMPSMDQNGNAELFEWDMSIAIIIVL
AGSCSLLLLAIILITTICSRRKKETRDDDKEDIPNVENVESGHVDSLIANHNGKVFDAHP
FPENPPLASSNTTETGCEDGRPAAGIFESNSRVMEGKLKGYSTLPGYGKETVRPITIWKG
NSFTTISARDPHISGKDSGKGDSDFNDSDSDISGDVHKKESPPTNSLWACTSECKVLGHS
DRCWSPSATRPNTSMACGPHLSTFSKTASLPRNTGRENYYPALLPKTNALQSVYEKVQHQ
EFDYILVGPQTPARIQETDETSIPEYTNS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcttaccaagggaaacattactacggagatgatacgaggaaaatgtataact
tattgtcaccggtggattttcttatttttaatccatccatttttatttgcctcactggtt
cagtccgagggaaatactattcgttaccagagctatgaagaggacgcaccaggtactgtc
atcggaaaccttgccaaggatatgtccttgagtctgtctcattcctccaagaccaatttc
aggatgatgaaacaattcaatgattcattcatcagggtaagagaaagcgacggggaactc
actgtcggggaacgaattgacagggaaagaatctgcaggcacactccacagtgtctcatc
acttttgacgttgtacatttctccaaagagcgatatagattgattcacgttgaggtagaa
ataaaggatatcaatgacaactctccggagtttccaaacaaggaatctgtagtggagatc
tcggagaatgcagcagtggggtcccgtatccctttagacccagccgcagacgctgatgtt
gggtcaaactacatccaaagctatcaaatttctgtcaacagtcatttcaccattgatgtg
ctcctgagagcggatggggttaaatatgcggaattggtgctaatgaaagagctagacagg
gagactcagtcatcatacactgtggagctggtcgctacagacggtggaaacccttacaga
tcggggtcaacaaagataactatcaaagtcactgactttaatgataatagtcccgttttt
gaccagaatagtttttcagtcagtttgccagaggacgcaccggttggcgcagttatactg
gacttgaacgcagttgatgcagatgagggtttaaacggagaggtcgcctacgggttcggg
aaacaggtttctcatgagatacgagaactttttcaagtggataataaatcaggtcggctg
acgctccggagccctgtggattttgaggacaaaagcacatatgagctagacgtgcaggcg
actgatctgggaccaaacccgaccccctccgtgtgtaaaatcataattcacgtcacagac
gttaatgacaatgccccagaaatcagtatcaccccaatgacctccatctcgactggcatt
gcatacatcagtgagtctgcagagaaggacagtctggtggcgctgatcagcaccctggat
agagactcgggtgttaacagccaggtccactgcacgttatacggccacgaccatttcaaa
ctccgacaggcttacgaggacagctacatgatagttacggcagcagccctagacagggag
aggatcagtgagtataacttgacggtcatggctgaggattttgggtcacccgcgctgaga
aagatcactcagtacaccattaggctcaccgacgagaatgacaacgcccctcactttact
aaagctgtctatgaagtttcagtggtggaaaacaacgccccgggcgcttatatcaccaca
gtgcaggccagcgacgcggatctgaacaataatgggaaaattacttacagacttgtggac
agtgttatcatggggtccccagtgaatacctttgtgtctcttaattcagtgtctggctcc
atatatgcactgaggagttttaattatgaggtgatgaaactgctagacatacatatcaaa
gcaagtgatggggggtcaccacagctgcagagcacagctgtcatccgactaataatagtt
gatcagaatgacaaccaaccatctatcatagagccccccctttacaaaggatctgctggg
attttcctgcccaaagatgcacctgcaggatatgttgtaactcagataaaggccacggat
gctgatgagggtattaatgcacagctgtcctataaaattacagacgggggtcacctggga
ttctctgtcaacaaagacacagggaaagtgcacgtgagcagacagctgatgtatgatctc
acagacaatgtcaaagtcacagtggcggtcagtgacaatggatccccggcactctcctcc
acagccattatacacttcagctttatagaaggaaccgtacccagtatgccttccatggat
caaaatggcaacgcggagctttttgaatgggacatgtccatagccataatcattgtcctg
gcagggagctgctctctcctcctgctggctatcattctcatcacaaccatttgcagccgc
cggaaaaaggagacaagggatgatgataaagaagacataccaaatgtggagaacgtggaa
agtggtcatgttgattcattgattgccaatcacaatggaaaagtgtttgatgcccatcca
tttccagagaaccctccattggccagcagtaacacaacagagacaggctgtgaggatggc
aggccagcagcaggcatatttgagtcaaacagcagggtgatggagggtaaattaaagggt
tattctacgctaccgggctatgggaaagagacagtcagaccgataactatatggaagggt
aattcattcacaacaatctcagcaagagatccccacatcagtggcaaggacagtggaaaa
ggtgacagtgacttcaatgacagtgattctgacataagtggagatgtgcacaaaaaagag
tcaccaccaacaaacagtctctgggcatgtacaagcgagtgcaaagtgttgggacactcg
gaccggtgctggagcccttcggctacaaggcccaacacgagcatggcatgcggaccgcat
ctgtcaactttcagcaagactgcttcacttccaaggaacaccggaagggaaaactactac
ccagctctcctacccaaaaccaacgcgctgcaaagtgtgtacgaaaaagtccaacaccaa
gaatttgactatattctcgttggtccacagacaccagccagaatacaagagacagatgag
acgtccattccagagtacacaaactcttaa
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