Pseudochaenichthys georgianus (South Georgia icefish): 117466339
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Entry
117466339 CDS
T09629
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117466339 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117466339 (pou2f1b)
03021 Transcription machinery [BR:
pgeo03021
]
117466339 (pou2f1b)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117466339 (pou2f1b)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117466339 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
P8
Motif
Other DBs
NCBI-GeneID:
117466339
NCBI-ProteinID:
XP_033965433
LinkDB
All DBs
Position
21:complement(33607700..33634186)
Genome browser
AA seq
715 aa
AA seq
DB search
MADGGAASQDESSGPDAKVNNQSETTKCAMESGDGNTGIQINGFDFQRQAMPLTNAHAQA
LLQQAAAHLNSNFHNNYFIQIPMPAQRLKTHSQSKSEDPSALPTSVQQSGLPQTQLMLAG
AQIAGLTLTPAQQQMLIQQAQAQLLAAAMQQSANQQNSTTGASISAQAATPITQLSQPIQ
IASLQPQNLSMPQFVLLQPTQLQPTQFIISQPPHTQQGLMQAQSLLNQLPQSQANLLTTQ
PSITLTTQPATPTRTTAATPILSLPHSQTTPKRLDTPTLEEPSDLEELEQFAKTFKQRRI
KLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLT
SDQSLSSPNSLGSPGMGIEGINRRRKKRTSIETNIRVALENSFLEQNQKPTSEEITMIAD
QLNMEKEVIRVWFCNRRQKEKRINPPSSGMGGGAIKTLFTPSSPMVASTASLVNSPINTS
TTLTVNPMMPLTSTSVANLSFTGTNTASVISTAPIFTTACSPSLSPSPTTIQSMKAENKG
HTIIQAPTSIASLGGGQLMVSASSLSAALQQAQLPSSFAAMAAAAAGLNPGLMASSQFAP
GGALLSLTSGGLGGALNPALMSNSTLATIQGVYQSLASSQIPITSLDGSNLLFANTSGGT
PLFLNPQNLSLLTSNPVSLMPGVGGLQLTSDPHLQASAAAVPVQNSTITAASKAQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggaaagtggtgacgggaacaccggaatccaa
atcaatgggttcgactttcagaggcaggcgatgcctctcactaacgcacacgcacaagcc
ctcctccaacaggctgcagcacatttaaatagcaactttcacaataactattttattcaa
attcctatgcctgctcaaagactgaagactcactctcagtctaagtcggaagacccgagt
gctcttccgacctccgtccagcagagcggtttgcctcaaacccagctaatgttggccggg
gctcagattgccggattgaccctgaccccggcgcagcagcagatgttgatccagcaggct
caggctcagctcctggccgccgccatgcagcagtcggccaaccagcagaacagcaccacc
ggggccagcatctcggcgcaggcagccacgcccattacccagctgtcccagcccatccag
atcgcctctctgcagccgcagaatctcagcatgccgcagtttgtcctgctgcagcccacg
cagctgcagcccacgcagttcatcatctcacagccaccgcatacccaacagggcctaatg
caagcccagagtcttctaaatcaactacctcaaagccaagctaacctcctgacgactcaa
ccaagcatcaccctcacaactcagcctgccactccaacccgcacaactgcagccacaccg
atcctgtccctgccccacagtcagaccacccccaaacggctggacaccccgactctggag
gagcccagcgatctggaggaactggaacagtttgccaagaccttcaaacagaggcgcatc
aaactgggcttcacgcagggggatgttggcctggccatggggaagctgtacggaaacgac
ttcagccaaactaccatttctcgctttgaggccttgaacctgagctttaagaacatgtgc
aaactcaagccattgttggagaagtggctcaacgatgcagtttgtgcagagaacctgaca
tcggaccagtccctgtccagccccaactcgctgggctccccggggatgggcatcgagggg
atcaaccgcagacggaagaagaggactagcatcgagaccaacatccgagtggccttagaa
aatagctttctggagcagaaccaaaagcctacctctgaagagatcaccatgatcgctgac
cagctcaacatggagaaggaggtgatccgggtctggttctgcaaccgccggcagaaggag
aagaggatcaacccccccagcagcggcatgggaggaggcgccattaaaaccctctttacc
ccgagtagccccatggtggccagcacagcaagccttgtgaacagtcctattaacacatcc
accactctgactgtaaacccaatgatgcctctcaccagcaccagcgtcgccaatttgtct
ttcacaggcacgaacacggcatcggtcatctccactgcacccatatttactacagcctgc
tctccatctttgagcccgtcgccaacgactattcagtctatgaaagcagagaacaagggc
cacaccatcatccaggcccccacatccatcgcctctctgggggggggtcagctgatggtg
tcggcctccagtctctcggccgcgctgcagcaggctcagttgcccagcagcttcgccgcc
atggctgctgccgccgcggggctcaacccgggactcatggcctcctctcagttcgctcct
ggcggggccctgctcagtctgacttctggaggccttggcggtgcgctgaatccggccctc
atgagcaacagcaccttggctaccatccaaggtgtttatcaatctctggcctccagtcag
atccccatcacgtctctggacggcagcaaccttctgttcgccaacacgtctggcggcaca
ccgctcttcctgaacccccagaacctgtcgctgctcaccagtaaccccgtcagcctgatg
ccgggggtaggggggctgcagctgacctccgacccccaccttcaagcctccgcggctgct
gtgcctgtgcaaaactccaccatcaccgctgcctccaaggctcagtga
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