Pseudochaenichthys georgianus (South Georgia icefish): 117466426
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Entry
117466426 CDS
T09629
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo03273
Virion - Lassa virus and SFTS virus
pgeo04140
Autophagy - animal
pgeo04142
Lysosome
pgeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117466426 (lamp1a)
03272 Virion - Hepatitis viruses
117466426 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117466426 (lamp1a)
04142 Lysosome
117466426 (lamp1a)
04140 Autophagy - animal
117466426 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117466426 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117466426 (lamp1a)
04090 CD molecules [BR:
pgeo04090
]
117466426 (lamp1a)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117466426 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117466426 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
117466426 (lamp1a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117466426 (lamp1a)
CD molecules [BR:
pgeo04090
]
Proteins
117466426 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
117466426
NCBI-ProteinID:
XP_033965537
LinkDB
All DBs
Position
3:complement(31347585..31355577)
Genome browser
AA seq
416 aa
AA seq
DB search
MRVYYSSAVLIIAWLAVLGCIQAVTLEVKEGNSTCIKAELSASFSVTYTTSSSTRTVQFP
LPNSTTVDTASSSCGTEESSPWLVAVFGPGHALGLSFSTNGSLYSVANLTLQYNLSDTST
FPDANSSVVITVVSASVGISATLNTTYHCVSPSTFAVGGATVTFSDMRLEAYMPGNELSP
TESICMADPTSSTAPPTTAGTTTTAAPAPTPPGTPERGTYFVNKGNGTQCLLAQMGLQLN
FTYFSRSQNKTVQELLNLTPNLTTSSGSCEASSASLVLTQGQITTLNFTFTLNSTSKKYH
LSGITLLADRADAIAPISASNSSLDYLRSTLGRSYMCNAEQTLAVVPSFSLNTFRLQVQP
FQVTTDQFDTAEECQMDQDLMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagagtctattactcttccgccgtgcttatcatcgcctggcttgcggttttaggttgc
attcaggctgttacccttgaagtgaaggaagggaactccacctgcattaaggctgagctc
tctgcatccttctctgtcacatacaccacctccagcagcacaagaaccgtgcagttccct
cttcccaactccaccacggtggatacagccagcagctcctgtggcacagaggaaagctcc
ccgtggctggtggccgtgttcgggcccggccacgcgctcgggctgagcttttcgaccaat
gggagcctgtacagtgtggctaacctgacgctgcagtacaacctcagcgacacttctacc
tttcctgatgccaacagctcagttgtaatcactgtggtatcagcttcagttgggatctcg
gcgacgctcaacaccacctaccactgcgtgagcccctccacttttgcagtaggtggagcg
actgtcactttctctgacatgaggctggaggcgtacatgccaggaaacgagctgagtcca
acagaaagcatatgcatggcagatccgaccagctctacagctccacctaccactgccgga
acaacaacaaccgcagctccagccccaacccccccaggaacacctgagcgaggcacctac
tttgtgaacaagggcaacggcacccagtgtctcctggcccaaatgggactgcagctcaac
ttcacctatttctctcgttctcagaataagactgtccaggaattattaaacctgactccc
aatctgacaacttcatcaggctcatgtgaagccagcagtgcttccttggttttgacacag
gggcaaatcaccacgctcaacttcacctttactctgaactccacgagcaagaagtaccac
ctgagtggaataaccctgctggctgacagggctgatgccattgctcccatctctgccagt
aacagcagtctggactacctgcgcagcaccctgggacgctcctacatgtgcaacgcagag
cagactctggctgtggtgccaagcttttctctcaacacattcagactgcaggtccagcca
tttcaagtcaccactgaccagtttgatacagcggaggagtgtcagatggaccaggacctg
atgctcatccccatcatcgtcggagcagctctggccggcctggtgctgatcgtcctcatc
gcttatctaataggaaggaagcggagccatgctggataccagaccatctga
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integrated database retrieval system
