Pseudochaenichthys georgianus (South Georgia icefish): 117466467
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Entry
117466467 CDS
T09629
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117466467 (aff3)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117466467 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117466467
NCBI-ProteinID:
XP_033965609
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All DBs
Position
21:32812728..32832001
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AA seq
1185 aa
AA seq
DB search
MPTVLGDKGKLSIVCFLIRCAYSQVTRSQHIICAKDILEDMTQSWTSQHALGGDQAQHIL
YNPKEAKLPTAQQRQSRGDVQLRVTRHPRVAPHKSMLVDDLKLSSDEDDTQRATHESAPW
DRHSLSAHRAHTHGRRVRHSSSDSSGSDSSAESCSSSSSSSSLHSRSRSPDPHPDPASPP
PCNNTETDHPPVAQWQLDKWPKKSRKKSTSSDQDPSQIIPGRLPSLPNNRAPSPARFWDT
DRDYSPSQSPIPSPQFNYSHNNSPLPSPGYSFCPSPSPFPSTCPSPGPRLIPSPVPSVCP
SPCGRTRASRSPSPIPRDPPRSPSPSLPAPSKVRHYPEVQTTQPSLTTNHHRTKSRPWIT
PLPNSDTKSKPTTSTHLHQHRPKTRPPQEQEQSKLKTSQIPSHTSRHKPNSHPSLKQISE
APKAKHTSHFEPTQGSRSNHKSSHKPRPSFQSSSQHSTTTAKHLAPGSRETNSGHSSHSQ
STSKAATNPTAGLNSRSNPSIKPRAKSSEAPAPAHVNQTKPTQKKAQSKDRAVEHRGDHL
SQAEGRKHERKEDRHREPKQGKQGRKEDRRLAEEQLLRRPWIHSSAEEEEEEEEVIVIES
RREERGGNRGRREQQQRREWQTKPTNTTQQRHQDYSHRTKKGGRSEEERELSPPPSRSPS
PHKVHSSSSSSSSSNSESESEHQAPITKVQADSTSHRKLPQRGGRSEGDRPKVVQPTAGH
PGEGGQKHYTLVPFGRSEQATAPSQRGLRNLVVHIDLCLLKRVPDSTTTSPVKKPSASSA
TKQREAMKHLCLPEAASKDSKRKRKLENGVSHRESKRSLPHANDPSGHTEPSSLTAERNF
VTETLHNGYLEEYMDNKRPLSPLSPLSDSPETTKPPPKTKTSEQLHVHKNRDKNRDSALK
PKMEVECVKVLRQPQPPESWGPAGHRGAVPNNETPHHAEYYLHEAKRMKHRADAMVDKLG
KAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARHEDKQ
LAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKVGYSSSKVPSTPPPGWSDSGKGAG
GPPDSLSPNSKHLSRGSNGGSAFPSHISIPQRIHQMAANHLNITNSVLYSYEYWEVADNL
AKENKEFFNYLNTLSGPLTLHSSIAHTVQYTRQALQWIRISAKLN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggcgacaaagggaaactttccatcgtctgttttctgatcagatgc
gcatattctcaggtaacaagaagccaacacatcatctgtgccaaagatattctggaggac
atgactcagtcctggacgtcccagcatgccttagggggagaccaggcccaacacatcctc
tacaaccctaaggaagcaaaactaccgactgcacaacaaagacaaagtcggggggatgtg
cagcttcgagtgacccgtcaccctcgtgtggctcctcacaaatccatgcttgtggatgac
ttgaagctgagcagtgatgaagatgacacccaaagggcaactcatgagtcagctccctgg
gacagacacagcctgtcagcacatcgagcacacacacatggcaggagggtgagacattcc
agctctgactcgtcaggctcggactccagcgcagagtcgtgcagcagcagcagcagcagc
agcagccttcactcccgcagccggagcccggaccctcacccagaccctgcatcccctcca
ccctgcaacaacacagagactgatcacccccctgtggctcagtggcagttggataaatgg
ccgaagaagtcccggaaaaaatccaccagcagtgaccaggatccttcccagatcatccca
ggacgccttccctctcttcccaacaacagagccccatctccagcccggttctgggacacc
gaccgggattacagccccagccagagccctatccccagcccacagttcaactacagccac
aacaacagccccctccccagcccgggttacagcttctgcccgagccccagtccgttcccc
agcacctgcccgagcccgggacccaggctgatccccagtccggtcccgagtgtttgcccc
agtccgtgtgggagaactagagccagtcgaagcccgagtccgataccaagagaccctcca
aggagccccagtccgagcctacctgctccttccaaggtccgacactaccccgaggttcag
acgacacaacctagccttacgactaatcaccacaggacgaaaagcaggccatggattacc
ccattgcctaacagcgacaccaagagcaagcctacaaccagcactcatcttcatcagcac
cggccaaagactcgacctccgcaggagcaagagcaaagcaaactaaagacttctcagatt
cccagccacacatctagacacaagccgaactcgcatccaagtttaaagcagatttccgag
gctcccaaagccaaacacacgtcccattttgaaccaactcagggtagtagatccaaccac
aaatccagccacaagcccaggccttcgtttcagtctagctcgcaacatagcaccacaaca
gcaaagcacttagcccccggaagtcgtgaaaccaactctggtcacagttctcattcccaa
tctacctctaaagctgctactaatcccactgctgggttaaactctagatcaaatcctagc
atcaaaccaagagccaagtcctcagaggccccggctcctgcgcatgttaaccaaaccaaa
ccaacgcagaagaaagctcagagtaaggaccgggcggtggagcacagaggagatcatttg
agccaagctgaggggagaaaacacgagaggaaagaggacagacatcgggaaccaaagcaa
gggaaacaggggagaaaggaagacaggaggctggcggaggagcagctactgagacgtccc
tggatccacagttcagctgaagaagaggaggaggaagaggaggtgatagtgatagagagt
aggagagaggaaagagggggaaacagggggaggagagagcagcaacaacgacgcgaatgg
caaaccaaacccacaaataccacgcaacaacgacatcaggactactcgcacaggacaaaa
aagggaggaagaagtgaggaagagagggagttatcacctcctccgtcccggtccccatct
cctcacaaagtacactcctcctcctcctcctcctcctcttccaattctgagtctgagtct
gaacatcaggctcccatcactaaagtccaagcagactccacctctcacaggaaactcccc
cagagaggaggcaggtcggagggtgacaggccgaaggtggtgcagcccaccgcaggtcac
ccaggtgagggggggcagaagcactacaccctggtgccgtttgggcggagcgaacaagct
acagcgccgtcccagagagggctgaggaacctggtggtgcacatagacctgtgtctgctg
aaaagagtcccggacagcaccactacttccccggtgaaaaaaccctccgcctcttcggcc
actaagcagagagaggcgatgaaacacctgtgtctccccgaggctgcgtcgaaagacagc
aaaaggaaacgcaagctggagaatggcgtgtcacacagagaaagcaagaggagtcttcct
catgcaaacgacccgtcaggacacacagagccttcaagtctcacagccgagcgcaacttt
gtgactgagactttgcacaatgggtacttggaggagtacatggacaacaagaggccgttg
tctcctctgtctccgctgtccgacagccctgagaccaccaagcccccccccaaaacaaag
acttccgagcagctccatgtccacaagaacagagacaagaatagagattctgctttaaag
cccaagatggaggtggaatgtgtcaaagtgttgagacagccccaaccacctgagtcctgg
ggccctgcagggcacagaggggccgtgccaaacaacgaaactccgcaccatgctgagtac
tacttgcatgaagccaagaggatgaagcaccgcgccgacgcaatggtggacaagctgggg
aaggctgtgaattacgtggacgccgctctgtccttcatggaatgtgggaaagcgatggag
gaagggccgctcgaggcaaagtctccctacaccatgtactcagaaaccgtggagcttatc
aggtacgccatgaggctgaagagccactccgggcccggggcgagacacgaagacaaacag
ctggcggtgctttgtttccgatgccttgcacttctttactggcaaatgtttcgtttgaag
aaggaccatgcactgaaatactccaaagttctgctggactactttaaggtaggctatagt
tcttccaaagtgccttctacacccccacccggttggagtgactctgggaagggagcagga
ggaccccctgattcactctcacccaacagcaaacacctgagccgggggtcaaacgggggc
agcgccttcccctctcacatcagcatcccccagcgcatccaccagatggcagccaaccac
ctgaacatcaccaacagcgtgctgtacagctacgagtactgggaggtggccgacaacctg
gcaaaggagaataaagagttcttcaactacttgaatacattgtctgggcctttgactctt
cacagtagcatcgctcacacagtccaatacaccagacaggctctgcagtggatacgcatt
agtgccaaacttaactga
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