Pseudochaenichthys georgianus (South Georgia icefish): 117466496
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Entry
117466496 CDS
T09629
Symbol
usp9
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 9X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117466496 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117466496 (usp9)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117466496 (usp9)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117466496 (usp9)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117466496 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
117466496
NCBI-ProteinID:
XP_071063106
LinkDB
All DBs
Position
21:complement(30152802..30195885)
Genome browser
AA seq
2631 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPEEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGMDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDIC
VIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFA
LMPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLL
FTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRT
GETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQY
MKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEW
EYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDEMSGD
EKQENESNVDPRDEVFSYHHQFDDKPASKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYV
PRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKI
CQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKR
LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPE
NQVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDG
DVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSMDKDS
ELVKYISELTISSTKPNQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSK
NVRYWFAHKVLFAFPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGP
ATQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVP
ATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVAARMQSSINGNPPLPNPYGDT
NLTTPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSP
PEDTSLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPAQTPPXTPG
PGPTPGPGPRAQDNWESTEEVAPAPAPAPAPAPAPTPASTAPAPAPAPPKE
NT seq
7896 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
gcacctgatgctcagagccaacccccactgccacagaaccagacatcatctcccaactca
tctaatgagaactctccagtgagcccaccagaggagcagggccagggggacggaccccct
cagctggaagaggaggagcccgccttccctcacactgacctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctattgacctgagtaaaaaaggaatggatgtaaagtgtgaggcgtgtcagagg
tttttccgggatggtctgaccatctccttcacaaagatcctgacagatgaggccgtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccgtttggtggagctg
tgtgtagccaagctctctcaggactggtttcctctactggagctgctggccatggccacc
aaccctcactgcaagttccacatctacaacggcacgcggccctctgagactgtccctgct
ggagcacagctggccgacgacgagctcttcgcccgaccacctgaccctcgctctcccaag
ggctggttggtggacttaataaacaaatttggcacgttaaacggttttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaatctcacagatgaggagctgaagaaagaggcg
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgtgtaccggggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtc
aacaaggtgatttccagtgtgtcctactacactcatcgacataaccctgaggaggaagag
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccatcgtg
ctgagggacagtttgcaccagccgcagtacgtggagaaactggagaagatccttcgcttc
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcacaggct
ggtaagcatgaggccattgtgaagaacgtccatgacctcctggccaagctggcatgggac
ttctcacctgagcagctcgatcacctttttgactgcttcaaggcaagctggaccaatgcc
agcaagaagcagcgtgaaaagttgctggaactaatccggcgcttagccgaggatgataag
gatggggtgatggcccacaaggtcctcaacctgctgtggaacctggcccacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattagattacagt
tgctcacaggacagagatacacagaagattcagtggatagatcgtttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaatcagagaaatctgtagcctc
tttggagaagcccctcaaaacctcagaaagaaaatgccaattaacatacaaacgaactta
gtgggccaaacccagagaagtcctcatgtgttttaccgccacgacctgatcaaccagctg
cagcataaccacgctctggtcaccctggtggctgagaacctctcggcctacatggagacc
atgaggcagttctccaaagaagagcaggctgagtttgacccccagacggtcagaccagga
agccgctacagtcatgtgcaggaagtacaggaacgactcaacttccttaggttcctgcta
aaagatggccagctgtggctgtgcgcccctcaggccaagcagatctggaagtgtctggct
gagaatgcggtgttcctctgtgaccgggaggcctgcttcaaatggtactcaaagctgatg
ggtgatgaaccagacctggacccagacatcaataaggacttctttgagaacaatgtcctg
cagttggacccatctttgctgacggagaacggcatgaagtgctttgagaggttcttcaag
gctgtcaactgcagggagggcaagctggtggcgaagcgcagggcctacatgatggacgac
ctggaactaataggcttggactacctctggagggtggtcattcaaggaagtgatgacata
gccagccgagctatagacctgctcaaagagatctataccaacctcggaccaaaactacaa
gtcaatcaggttgaaattcatgaagatttcatccagtcctgctttgaccgtctgaaggcc
tcctacgacaccctgtgtgtgttagatggagacaaagatagcatcaactgtgcccgtcag
gaggctattcgcatggtgcgagtccttactgtgctcaaagagtacatcaatgagtgcgac
agtgactaccacgaggagaggactatactgcctatgtcaagagctttccgtgggaaacat
atcacactgatcgtccgtttccccaaccaggggcgccaggtcgatgatctggatatctgg
tcacacaccaacgatacaatcggctcggtccgccgaggcatcctcaacaggatcaaagct
aatgctgcacatacgaagattgagcttttcattggtggggaggttgttgatccagctgac
gacaggaagttgattggtcagctcaatttgaaggacaaaacgctgatcacggccaagctg
acccaggtgagtgccaacatgccttcgagcccagacagctcttctgattcctcaactggc
tctcctggtaaccatggcaaccacttcagcgacgggcccaaccctgaggtggagagctgt
cttcctggtgtgatcatgtcgctgcatctgcgctacatctccttcctgtggcaggtggct
gatctgggctgcaacctcaacatgccactgctcagagatggagctcgggttctcatgaaa
ctcatgcctccggacaacactaccgtggagaatctgcgagctgtgtgtctggaccacgcc
aagctcggggagaacagcctcagtccttcactggactcgcgcttcttcggcccctcaccc
tcacaagtgctatacctcattgaggttgtttatgctttgctgatgccagccagtgccact
ctgggtgaggatgccagcgacttccagtacaacttcttgaagagcggtgggctgcccctg
gtgttgagcatgctcaccagaaacaacttcctcccatcggcagacatggaaacacgccgt
ggagcttacctcaatgcgctcaagatcgccaagctcctcctcactgctgtaggcttcggc
catgtgaaggctgtggctgaggcctgccagcccaacgcagaaggaaatattcccgtctct
ccgattaatcaagccactcacgaccaggctctggtcctccagagcgccctgcaaaacatc
ccaaaccctgcctcagaatgcatgctgcgcaatgtagccatccgcctcgcccagcagatc
tctgatgaggtaacagaaaataattttttccaggcatcaaagtacatcccagacatctgt
gtgatccgagctgttcagaaaatagtgtgggcatcaggctgcggaacagtgcagctcgtc
ttcagttcaaatgaagaaatcagcaagatatatgaaaagacaaatgcagctaaggaacca
gatggggaagatgagcaggtgtgttgtgaagccctggaggtgatgacactgtgctttgcc
ctcatgcccacggctctggacaccctcagtaaagagaaggcttggcagaccttcatcata
gacttgctactgcactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttc
ctgatggcaactagatgctgtatgggccatcgacccctcctcttctttatcaccctcctc
ttcactgtgctagggagtacagccaaggagcgagccaaacatgctggagactacttcact
ttactcagacaccttctgaactacgcctacaacagcaacatcaacctgccaaacgctgag
gtgctgctcaacaacgagatcgactggctaaaacggataagggatgaggttaagaggaca
ggggagaccggtgtggaggagaccatcctggagggccaccttggggtgaccaaagagctt
ctagccttccagacgccagagaaaaagtactacattggctgcgagaagggaggagcgaac
ctcattaaggagctgatcgacgacttcatcttcccagcatctaacgtgtacctgcagtac
atgaagagcggggagttccccacagagcaggccatcccagtgtgcagcagccccgcctcc
atcaacgctggctttgagcttctcgtggcactggctgtaggatgtgttcgcaacctcaag
caaatagtcgacaccctgactgacatgtactacttaggttgcgagacactgacagagtgg
gagtacttgcctccggtggggccccgacccaacaaaggctttgtaggtttgaagaacgcc
ggggccacctgttatatgaactctgtcatccagcagctgtacatgatccctccaatccgc
aacggcatcctggccattgaaggcaccggcactgatgtggatgacgagatgtctggggat
gagaagcaggagaatgagagtaacgtagatcctcgtgatgaggtgttcagctaccaccat
cagttcgatgataaacccgccagtaagtccgaggacaggaaagagtacaacattggggta
ctgcgccacctgcaggtcatcttcggacacctggctgcgtctaggcttcagtactatgtc
cccaggggcttctggaaacagttcaggttatggggtgagccagtcaatttgagggagcag
catgatgctctggagtttttcaactcgttggtggacagtttggatgaagcactgaaagcc
ctgggccaccccgccatgctgagcaaggtgctgggagggtccttcgctgaccagaagatc
tgtcagggatgcccccacaggtatgagtgtgaggagtcatttacaacactcaatgtagac
atcaggaaccaccagaacctgttggactccatggagcagtacgttaaaggagatctgctt
gaaggagccaatgcttaccactgtgagaagtgtaataagaaggtggacactgtgaagcgc
ctgctgataaagaagctgccgccggtcctggccatccagctgaaacgcttcgactacgac
tgggagagggagtgtgccatcaagttcaatgactactttgagttccccagggagctggac
atggagccgtacacggtagctggtgtggctaagctagagggcgatgacgtgaacccggag
aaccaggtgatccaacagaacgagccctctgaacccacgcctcccggcagctccaagtat
cgcctggtgggagtgctggtccactcaggccaggccagcggtggacattactactcctac
ataatccagaggaacggcggcgacggcgagaagaaccgctggtataagtttgacgatggt
gatgtgactgagtgcaagatggacgatgaggaggagatgaagaaccagtgcttcggaggg
gaatacatgggcgaggtgttcgatcatatgatgaagaggatgtcgtaccggaggcagaag
cgctggtggaatgcctacatcctcttctatgagcgtatggactcaatggacaaggacagc
gagcttgtcaaatacatctcggagctgaccatctcctccaccaagcccaatcaggtcaag
atgccgggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccga
atgcaatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtc
tatttaaaccctcctccaggacaagaccaccttctgcctgaggcagaggagattgctatg
ataagtgctcagctggctgctaggttcctcttcagcacaggtttccacaccaagaaagtg
gtacggggtcctgccagtgactggtatgacgccctctgcatcctgctgagacacagtaag
aatgtacgctattggtttgcacacaaagtcctgtttgcattccccaaccggttctcagag
tacctgcttgagtgcccgagcgctgaggtccgtggtgcgtttgccaagctcatcgtcttc
atcgctcacttttccctgcaagacgggccgtgcccctcccccaccgcctcgcctggaccc
gctactcagggctgtgataacctcagtctaagtgaccacctgttgagggctgtactcaac
ctgctcagaagagaggtttctgaacacggccgtcacctgcagcagtacttcaacctcttt
gtcatgtatgcaaatctcgggctggcagaaaagacccagctgttgaagctgaatgtccct
gccactttcatgctggtcgctctggacgagggtcccggccctcccattaagtaccagtac
gctgagctgggcaagctctacactgtggtctcccagctggtccgttgttgtgacgtcgcc
gcacgcatgcagtcctcaatcaatggtaaccctcctctccctaacccgtacggggacacc
aacctgacgacccctgtgatgccggtgcagcagctagtggcagagatcctgtttgtgagg
accagctacgtgaagaagatcatcgaggactgcagcaactctgaggagacggtgaagctg
ctgcgcttcagctgctgggagaaccctcagttctcttccactgtgctcagcgagctgctc
tggcaggtggcatactcctacacgtatgaactgaggccttacctggacttgctgctacag
atcctgctcatcgaggactcctggcagacacacaggatccacaatgtgctgaagggcatt
cccgatgacagagatgggctctttgacaccatccagcgctccaaaaaccactaccagaaa
cgagcctaccagtgcatcaagtgcatggtggccctctttagcaactgctccgtggcttac
cagatcctacagagtaatggtgaccttaaacgaaagtggacgtgggcagtggagtggtta
ggggacgagctggagaggagaccctacacggggaaccctcagtacacgtacaacaactgg
tcccccccggtccagagcaacgagacctccaacggctacttcctggagcgctcgcacagc
gcacgtatgacactcgccaaggcctgtgaactctgtcctgaggagctcaagtgtactcag
ggaagcccagggaaggagcccgatgaacaggaagcacctgatgatcaggactcttcccct
ccagaggacacgtctctgtacccccactctcctgggaccacacagtttcagcagaacaac
cacccccatgggcagccgtacaccgggcctgctgctcagcacatgaacaaccctcagcgc
cccggtcctgcctcggccccgactccagggcccgcccagaccccccccnncaccccaggc
cccgggcccactcccggcccaggcccgcgagcacaagataactgggagagcaccgaggag
gtcgcccctgcacctgcccctgcacctgcacctgcacctgcacccacccccgcctccact
gcccccgccccagcgcctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
