Pseudochaenichthys georgianus (South Georgia icefish): 117466497
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Entry
117466497 CDS
T09629
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117466497 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117466497 (gpc6a)
Proteoglycans [BR:
pgeo00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117466497 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117466497 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Motif
Other DBs
NCBI-GeneID:
117466497
NCBI-ProteinID:
XP_033965662
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Position
3:complement(31570248..31790238)
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AA seq
571 aa
AA seq
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MYAMWRLQVALCTLSVLSLSSAGESKARSCSEARQAYTAKGFSLINVPHQEISGEHLRVC
PQGYTCCTSEMEDKLHQQSKLEFENLVKNSSHNMRTTFVSRHQKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
LPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVAD
RLEGPFNIEAVIEPVDIKISDAIMTMQDNSMQVSAKVFQGCGQPKQSGVGRSTRGISDVF
SGRFRPYTPEERPTTAAGTSLDRLRVVWRTMQHSVIDIKDKLKESKRFWSNLPDDICAKG
KLTESDEDQCWNSHTKGRYFPEVVGEGLTNQVSNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSTSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAA
AAGKSFSSGPSLVLVVAALTLPLGAMQTQWR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggaggctgcaagtcgccttatgtactctgtcggtgctgtcactgtca
tctgctggagaaagcaaagcgcggagctgtagcgaggcacggcaagcttataccgctaaa
ggattcagcctcatcaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtctgt
cctcagggatacacctgctgcacatctgagatggaggacaaactccaccagcagagcaaa
ctggagtttgagaacttggtcaagaacagcagccacaacatgaggacgacgtttgtctcc
aggcatcaaaagtttgatgagtttttcttggagctgctggacaattctgagaagtccctc
aacagtatgttcacacggacgtacgggaagctgtacatgcagaactcggaggtgttccag
gatctgttcactgagctaaagcgctactacacggggggcaacgtcaacctggaggagatg
ctcaatgacttctggtccaggctgctggagcgcatgttccagttactcaactcccagtac
cacttcacagacgactacctggaatgtgtcagtaaatacacagatcagctgaagcccttt
ggagatgtgcccaggaagctgaaggcccaggtcaccagggccttcatcgctgcacggaca
tttgtccaggggctaatggtgggccgggaggttgccaacagggtcgccaaggtgaatgta
ttgccagcttgtgtcagagccttgaccaagatgctttactgtccatactgccgtggcatg
cctgggctgaaaccctgtcacaactactgccacaacgtgatgaggggctgtctagctaac
caggcagacctagatgctgaatggaacctcttcatcgatgccatgttactggtggcagac
agactggagggacccttcaacattgaagctgttatcgagccggtcgacatcaagatctct
gatgccatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggttttccaaggg
tgtggccagccaaaacaatcaggagttggcagatctacacgcggcatctcagatgtattc
agtggtcgcttcagaccctacactcctgaagagaggccaaccacagcagccggaacaagc
ctggatagactgagggttgtgtggaggacaatgcaacacagcgtgattgacatcaaagat
aagttaaaggagtccaagaggttttggtccaacctgcctgatgacatctgtgccaagggc
aagctgacagagtctgacgaggatcagtgctggaacagccacacgaagggcagatatttt
cctgaagtcgtgggggagggtcttaccaaccaggtgagcaacccagaggtggatgtggac
atcaccaggccggacacactgatacgacagcagatcatggctctacgtgtcatgaccaac
aagctaaagaacgcctacaacggcaatgacatctacttccaagactcaagtgatgaaggc
agtacttctggcagtggcagcggctgctctgatggctgcacaacagagtttgtttttgtt
ggaacagaggctcctgtgattggagccgacagaagcgacgaacgcgcagcagcagcagcg
gcggcaggaaagtccttttccagcggaccctccctagtgctggtggtggccgccctcaca
ctcccactgggggcaatgcagactcaatggagataa
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