Pseudochaenichthys georgianus (South Georgia icefish): 117466504
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Entry
117466504 CDS
T09629
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117466504
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117466504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
SOS1_NGEF_PH
RHG20_PH
PH_16
Motif
Other DBs
NCBI-GeneID:
117466504
NCBI-ProteinID:
XP_033965673
LinkDB
All DBs
Position
21:18089600..18114782
Genome browser
AA seq
1648 aa
AA seq
DB search
MENKEESPADEQAPTPPERGLLHTWQSAGPPTQLCPGRVLLARPVLQVALGEHHGLLLTQ
GGQVYSFGELSWRDLSVPVSAPLLEASLMERVVVRVAAGGFHCGALSEQGNVYMWGENTA
GQCGLTERDTVTNITVSEPCPVTVVDSEAVPPAGVRVVDLALGREHSLALSAQNELWAWG
SGCQLGLVTSTFPVWRPKKVEHLAGRHVIQVACGAYHSLAVVRSLPAQKTQNPSEKRERG
QSPHYSVTEREEQLAVDAGHYCPLGVELSEFMTGESSPRRRGPRRRLHPGGRSAGSSPGS
ATGSCPYSEDGKSYTKQTNLTFGHPLIETDGSPKSHRPLGWRANKNSVFSDGTEINNLLQ
ELSSQPLDIHQSTGPGDTDSLSSYTSDDSCVSSTPSTDVLTSSYKEDSPIKGQSNNGVAV
AYSSSPVCLEEVRLCLEAEKQALQGQKSTSLTNINQKGTPAASRRRSLPGTPTRGSPQRR
RPCACRPSSAGRTQAATPEDAGAGLPSLETEVWSWGRGSEGQLGHGDQLARLQPLCIKPL
TGEEVIKVAAGSHHSLALTAHCQVYSWGSNMCGQLGHVNSPVTVPQQIKLSGGLRVWDLS
AGQSHSLLLADGDCVQPVLLYCGQQQEQTSAQSEKSQQGQRSCQRSPNRAESYTVRPSLL
PFCMEMGYISSVCSGGQRCAVLADQNVMGFISAIHELASRERHFYCWLSSAKQLLLTPLR
NKESVCPSLGEPCTHLFFSLCESFVRLSVLIGRHSTSLSYFLLEVQSSDVTALPLLTHTE
HFMDIYKEYCSSVGNFEVMGGFRSLHKLALECLGSQQTVLAQLCADQSLGGDVDLVSVFY
RPLQQLHQYSRVMLKLAACFDVLTAEYQFLHEGCTHFDSLSLSLLRKKKEAESTFLFWKS
HSGKTTEVLRLPQRRVVCESSNRSLTLQNAGRFSNHWFILFNDTLVHTQGAIPSQSLFST
HHIYPLSCLWVKPVTEDSSGHYAIKITCPEESFTLVASTPQEKNKWLRSLNQAVDQVLGG
AGQGSSPGLTAMSRTAPYTFTGEGCFKDAQYTGAWLAGRLHGRGTMKWPDGRTYRGNFKK
GQEEGYGECLIPNKVLNKPDSYQGQWRDGKIHGFGKYKYASGEVYEGCFCDGQRHGYGML
SSGKLAKNSSSVFIGQWVHDGKSGYGVYDDMTRGEKYMGLWLDEQRHGNAVVVTQCGVYY
EGTFKDNKMCGPGLLVSDDDTALHGEFSDDWIVNGKGVLSLANGDCLEGQFSGEWTSGLK
VVGTYTKPPPEEPENKERSSLLKVGQYVVPAAQRWLCVFDECWSRLGCEAPGKGERAAAW
DNIAVTITTARRQSIDLTRSQSKVLECLELIPQHGDPVTTANYDNIRRYLSKACETPHHP
LGWLVETLVTVYRMTYVGVGSNRRLLRQAVQELLAFLTHFYSIIRFLYPGLPEDGGIIPD
SPSSASEGKHNSNIAEHVVMVVSCSSLLLPQLLPRLYPPLFTLYCLQQEQEEALYWERVL
RLNKQPDQSLLSFLGVQEKFWPVWMSILGDKKQIVSSSKDACFVSAVETLQLISTTFTPS
DKLLIIQRTFEEMTQEGKPVLDGNFLWCMDDLLPLFLYVVLRARIKSLGAEVSLIEDLMD
LNVQHGEMGLMFTTLKACYMQIQQESAI
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaagaggagagccctgcagacgaacaggcccctactcctccagagcgaggc
ctgctccacacatggcagtcagcgggcccccccacgcagctctgtccggggagagtgctg
ctggccaggcccgtcctgcaggtggcccttggagaacaccatggactcctgctcacacag
ggtggacaagtgtactcttttggagagttgtcatggagggatctgagcgtcccggtgtct
gctcccctgctggaggcctcactgatggagagggtggtggtccgtgtggctgccggtggt
tttcactgtggagcactgagcgagcagggcaatgtctacatgtggggggagaacactgca
ggacagtgtgggctgactgagagggacacagtcacaaacatcacagtttcagagccctgc
ccggtcacagtggtggacagcgaggccgttcctccagcaggggttcgggttgtggatctg
gctcttgggcgggagcacagcctggctctgtcggcccagaacgagctgtgggcctggggc
agcggctgccagcttggactggtcaccagtacctttcctgtgtggagacctaagaaggtg
gagcatctggcaggcagacatgttattcaggtggcttgtggtgcctaccacagcctggcc
gtggttcgcagtttacctgcacagaagacccagaatccttctgagaagagggagcggggt
cagtcacctcattattcagtgactgaaagggaagagcagcttgcagtggatgccggtcac
tactgtccgctgggggtggagctgagtgaattcatgacaggcgagagctctcccagaaga
agaggccccagacgaaggctgcatcctgggggaaggtcagctggcagcagtcctggctct
gcaaccggttcatgtccatattctgaagatggcaaatcttacactaaacagactaatctt
acatttgggcaccctctcattgagactgacggcagcccaaagtctcaccggcccttaggc
tggagagccaataagaactctgtgttctctgatggaacggagattaataacctccttcag
gaactctccagtcagcccttggacattcaccagagcaccggcccaggagacactgactca
ctgagcagttacacttcagatgacagctgtgtttcctcgactccttccacggatgtgttg
acttccagttacaaagaagactcgccaattaagggtcaatccaacaatggagtggctgtg
gcgtactcctcctccccagtgtgtttggaagaagttcggctctgtctggaggcggagaaa
caggcactacaggggcagaagagcactagtctcacaaatataaaccagaaggggacccca
gcagccagcaggagacgctccctgcctggaacacccacccgtgggtctccgcagcgacgg
aggccttgtgcctgcaggccgtcctccgccggtcggacccaggccgcaaccccggaggac
gctggagccgggctgccctctctggagacagaagtgtggagctggggccgcgggtcggag
gggcaactgggccacggagaccagctggccagactccagcctctgtgtatcaagcctttg
accggcgaggaggtgatcaaagttgctgccgggtcccaccattcactcgccctcaccgcc
cactgccaggtgtactcttggggcagcaacatgtgtggacagctcggtcacgtcaacagt
cctgtcactgtacctcaacagataaagctgtctggtggtcttcgggtttgggacttgtcc
gcggggcagagccactccctcctcctggctgatggagactgtgtgcagccggtcctgttg
tactgcggccagcagcaagagcaaacgtcagcccagagtgagaagtcacagcagggtcaa
aggtcatgtcagaggtcacccaacagagccgagagttacacagtcagacccagcctgctg
cccttctgcatggagatgggttacatcagcagcgtgtgcagcgggggtcagcgctgtgcg
gtgctggcagaccagaacgtcatgggattcatctcggccatccatgagctggcctccaga
gagagacacttttactgctggctgagcagcgctaagcagctcctcctcactccgctgcgg
aataaagagagtgtgtgtccttcgttaggtgagccatgcacgcacctcttcttctctctc
tgtgagagttttgttcgtctgagcgtcctgattggccgacactccacgtcactaagctac
ttcctgcttgaagtgcagagctctgacgtcactgcccttcccctgctgacgcacactgag
cactttatggacatttataaagagtattgttcttcagtaggtaactttgaggtgatgggt
ggattccgatcactccataaactcgcacttgagtgtttgggctctcagcagacggtgctg
gctcagctgtgtgcagaccagtccctcggtggtgacgttgatctggtttctgtgttttac
cggccgctgcagcagctgcaccagtacagccgagtcatgctcaaactggcagcctgtttc
gatgtgttaactgcagagtatcagttcctccatgagggctgcactcactttgactccctg
tccttgtccctgttgaggaagaaaaaggaggctgaaagcaccttcctcttctggaagagc
cactctggaaaaactacagaggtcctgcgcctccctcagcgccgcgtggtgtgtgagagc
agcaacagatctctgactctgcagaacgccgggcggttctccaaccactggttcattctg
ttcaacgacacactggtgcacacacagggtgccattccctctcagagcctcttctccacg
catcacatctaccctctgagctgtctgtgggtgaaaccagttactgaagacagcagtgga
cattatgccatcaagattacatgcccggaggagagtttcaccctggtggcttcaacccca
caagagaagaataagtggctgcggtctcttaaccaggcggtggatcaggtgctggggggg
gcaggtcaggggtcgtctcccgggctgacagcgatgtcccgcacggccccctacacgttc
actggagagggatgctttaaagacgcccagtacaccggggcctggctggcagggcgactt
catggcagaggcaccatgaagtggccagatggacgcacctacagagggaactttaagaaa
ggacaggaggaaggctatggagagtgtttaatacctaacaaagtactgaataagccagac
agctaccaaggacagtggagagatggcaagatccatggcttcggcaagtacaagtatgcg
agtggcgaggtgtacgagggctgtttctgtgacggacagcgccacggttacggcatgctg
agctccggtaaactggccaagaactcctccagcgttttcattggccagtgggtccatgac
gggaagtcaggatacggagtctacgacgacatgaccagaggtgagaaatacatgggactg
tggctggacgagcagcgccatggcaacgctgtggttgtcactcagtgcggtgtgtactat
gaagggaccttcaaagacaacaagatgtgtggtccaggtctgttggtgtcagatgacgac
acagctttacatggggagttttctgatgactggattgtcaatgggaagggggttttatcc
ctcgctaacggggactgtctggagggccagttcagtggagagtggacctccgggctgaag
gtggtgggaacgtacaccaaaccccccccagaagaaccagaaaacaaagagaggagcagc
ctgctcaaagtgggtcagtacgtggttcctgcagctcagaggtggctgtgtgtattcgat
gagtgctggagtcggctgggctgtgaggctccggggaaaggagagagggccgcagcctgg
gacaacatcgccgttaccataacaaccgcacgacgacagagcatagatctcactaggtct
cagagtaaagtgttggagtgtttggagttaattccccagcatggagacccagtgaccacc
gctaactacgacaacatacgaagatacctcagcaaggcgtgtgagaccccccaccaccct
ctgggctggctagtggagaccctggtgacggtctacaggatgacgtacgtgggagtgggg
tcaaaccgacggctgctccggcaggcggtgcaggagctgctggccttcctcacacacttc
tacagcatcatcagatttctgtatccggggttaccagaagatggcggcatcatcccagac
tctccttcctctgcctctgaaggcaaacacaactctaacatagcagagcacgttgttatg
gtggtgagctgctcctcgctgctcctcccccagctgctcccccgtctctacccccccctc
ttcaccctgtactgcctgcagcaggagcaggaggaggctctgtactgggagcgcgtcctc
cgactcaacaagcagcccgaccaatcactgctcagcttcctgggagtgcaggagaagttc
tggccagtgtggatgtcaatccttggagataaaaagcagattgtatccagcagtaaagat
gcctgttttgtttctgctgttgagactcttcaactaatcagcaccaccttcactccgtca
gacaaactcctcatcatccagaggacgtttgaggagatgacccaggaagggaaacctgtg
ctggatggaaacttcctgtggtgcatggacgacctgctgcctctcttcctctatgtggtg
ctcagggcgaggatcaagagcctgggagctgaggtcagtctgatagaagacctgatggat
ctcaacgtacagcacggagagatgggactgatgttcaccacgctgaaggcgtgctacatg
cagatccagcaggagtcagctatttaa
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