Pseudochaenichthys georgianus (South Georgia icefish): 117466521
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Entry
117466521 CDS
T09629
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117466521 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117466521 (gtf2e1)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
117466521 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
117466521 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF4054
Motif
Other DBs
NCBI-GeneID:
117466521
NCBI-ProteinID:
XP_033965706
LinkDB
All DBs
Position
21:complement(16712450..16720317)
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AA seq
444 aa
AA seq
DB search
MIEPEILTEVPAALKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHIRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDASVCSDGRTQVARFNE
QIEPIYALLRETEDVNLSQDLLEPEPAEIPALRQSRERAALAAGMTGPHREAWSNRGSSY
GDLYTQNVVISMEEQEEQQRLANEGKAPKERPVWLTQSTVTGAYSEPEVIKSRDDVVPVA
PDGAPAGMDQSDENEEVMRALLIHEKRGAAAVGGAGGGASSATKSRSSGKANASDSDSDT
SESDDDSPAVPPIASAAKSRAAEEEEDDDDEFEDVGDEPMVMVGGRQYSYRDVSQKPELV
EKMSAQEKEAYIEKGQSLFQDMYF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccagagatactcaccgaagtccctgcagcactgaagcggctagccaagcag
gtagtgaggggtttctatggagtggaacatgccttggccctggacgtgctcattcgcaac
ccctgtgtacgtgaggaggacatgctggagctgctcaagtttgatcgtaaacagttgcgc
tcagtactcaacaccctgaaggcagacaagtttgtcaagtgtcgcatgagagtggaaacg
gcccctgatggcaagaccacacggcacaattactacttcatcaactacagggtactggtc
aacgtggtcaagtataaattggatcacattcgacggcgcatcgagacagatgagagagac
tccaccaaccgtgcctccttccgctgcccctgctgcttctccaccttcaccgacctagag
gccaaccagctgtttgaccccatgacaggtacatttcgctgcaccttctgccagacggag
gtagaagaggatgcgtctgtgtgttctgacggcaggacacaggtggcacgcttcaacgag
cagatcgaacccatctacgcattgctacgcgagaccgaagatgtcaacttgtcccaggac
ctgctggagccggagcccgctgagatccccgccctcagacagagccgggaacgtgctgca
ttagccgctggaatgactggtccgcaccgtgaagcctggtccaacagaggctcgtcctac
ggtgacctgtacacccagaatgtggtgatcagcatggaggagcaggaagagcagcagaga
ctggccaatgaaggcaaggcgcccaaggagaggcccgtatggttgacccagagcaccgtg
acgggcgcttacagcgagccggaagtcatcaagagccgagacgacgtggtacccgtagcc
cctgatggagcacctgctggaatggatcagtcagatgaaaatgaggaagtgatgcgcgcc
ctgctcatccatgagaagaggggtgcagcagcagtgggaggagctggaggcggagccagc
tctgccaccaagagtcgttcctctggaaaggctaacgccagcgactcggacagcgacacc
agcgaatcggacgacgactctcccgcagttcctccaatcgcgtcagctgctaagtctcgg
gccgcagaggaggaggaagatgacgatgatgagtttgaggatgtgggagatgagccgatg
gtgatggtggggggtcggcagtactcctaccgggatgtcagccagaagccagagctggtg
gagaagatgtctgcacaagagaaagaggcctacattgaaaagggacaaagcctcttccag
gacatgtacttctga
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