Pseudochaenichthys georgianus (South Georgia icefish): 117466640
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Entry
117466640 CDS
T09629
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117466640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117466640
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117466640
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNARE associated proteins
Others
117466640
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117466640
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117466640
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117466640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
Motif
Other DBs
NCBI-GeneID:
117466640
NCBI-ProteinID:
XP_033965903
LinkDB
All DBs
Position
21:22477417..22488718
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AA seq
437 aa
AA seq
DB search
MMADSGSNEEVAVIGNTDITSTETESNIINTMVERGTALLRKMEINVAEAEKRTGKNTVN
MQETYTVYLIETRPAETVPGGGAPAAPDTLWRRYSEFELLRTFLLVTYPYIIIPPLPEKR
AEFQWHKLAADNLDPDFVERRRVGLENFLLRVASHPVVSNDKIYFLFLTEEKGWREAVLE
TGFQDKVDSRLKSLSAMFRVKNPDKRFTAMKQYSDELNTVISQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYAAQIDDILEEEEHYADQLKEYLFYTDA
VRSVCKKHELIQYELEMAAQELVSKKQQREELATGTVRVFSLKGMTSKLFGTESQEQRES
RLAALEQSIQEGEEALKEKNTECKEFVQMAWQDIERFKEQKDKDLREALISYAIMQISTC
KKGIQVWSNAKDCFNKM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactctggaagtaacgaagaagtggctgtgatcggtaacaccgacatcact
tcaacagaaaccgagagcaacattatcaacacgatggtggaacgagggacagctctgttg
aggaaaatggagataaatgtggcagaagcagagaagagaacagggaaaaacaccgttaac
atgcaggaaacttatactgtctacctcatagaaacacggccagctgaaactgttccaggt
gggggggcgcctgcagcacctgacactctgtggagacgctacagtgagtttgaattactc
agaacattcctcctggtcacctacccctacatcatcatccctccactcccggagaaaagg
gcggagtttcagtggcacaagctggcagcagacaacctggacccagactttgttgagcga
cggagggtcggtctggaaaacttcctgctgcgtgttgcatcacatcctgtcgtttccaat
gacaagatctacttcctatttctgacagaggagaaaggatggagggaggcggttttggag
acgggattccaggataaggttgactccagactaaagtctctgagtgccatgttcagagtc
aagaaccctgacaagcgattcacagcaatgaaacaatacagtgatgaactgaacactgtc
atctctcagttactgagggtgcgggcgagagtagcagacaggctgtatggagtctacaag
gtccacggtaactacggcagagtatttagcgagtggagtgctattgaaaaagagatggga
gacgggctgcagagtgctggccaccacatggacacgtatgctgcacaaatagatgacatt
ctggaggaggaagaacactatgcagaccagctgaaagaataccttttctacactgacgcc
gtcaggtcagtatgtaagaaacatgagctgatccagtatgagttggagatggcagctcag
gaactcgtctctaagaaacagcagagagaagagctggctaccgggacggtacgtgtgttt
tccctgaagggcatgaccagtaaactgtttggcacggagagccaggagcagagggagagc
aggctggctgctctggagcagagcatccaggagggggaggaagcgctcaaggagaagaac
acggagtgcaaagagtttgttcaaatggcctggcaagacattgaacgttttaaggagcag
aaggacaaagacctgcgtgaagcactaatcagctatgccataatgcagatcagcacgtgt
aaaaagggaatccaggtgtggtccaacgccaaggactgtttcaacaaaatgtga
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