Pseudochaenichthys georgianus (South Georgia icefish): 117466657
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Entry
117466657 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117466657
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117466657
Endosome - Golgi transport
Rab GTPases and associated proteins
117466657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
117466657
NCBI-ProteinID:
XP_033965927
LinkDB
All DBs
Position
21:38060423..38099788
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AA seq
1132 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTVRSNDFFLLQRRRGHGEPTGRITGLLVGALDSVLDSNARVT
PFRILLQVPGSQVSWVIASGAAIGEVNKHWDWLVHNLLHSLSVFENKEDGASFVRGKVKG
LIAEEVRGRQAAQEEDPEKFRELLRKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGFLYL
SINHLAFYAFLLGKEVKFVIPWAEVTRLERVSSGLMTEAIRINTRKRQREFSMFLNLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQPARITKRILEEQAIREYVLALFRLPREERLH
EVASCSVWTPHARCHTAGTLYTTDCYLCFSSREEGSCILLIPLSEVLSIEKAESTSLLPH
PVIVSVRSKKAFQLIDLHDRDELVENLNARLRSLQWKQAMFRGKKDGKRSMRSPTPYYTF
YYDTDEEEIEEQVLRNTVNSEALMTAFHQNQPGTNGNKSVEEVKQRLWDDHFSEFGRGVT
MFRTDKTQRLVAMGIPESLRGELWMTLSDASSELEAHPGYYSGLVQRSMGQTSLTTDEIE
RDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEEAFW
LLVAVCELMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHVPDLSTLSSVSLSWFLTL
FLSVLPFHSAVCVVDCFFFYGIKAIFQLGLAALDANAEALSACTDDGQALMILSSFLEQV
GYEESCCPPSSPPPSSPPPSSPPPSSPPPAIEETCSSEADIPAVRSTNITDLLNESYQKF
GDLTVRQIERLRCRHRILVLQAHEDTTKENALRLVTPDVSISPEILADVYDLFKTEHFVS
LYWGDSSSAAAAEAAAWRYGDSGHSYMERQYHLDRAQFKSLYGLLAPWPGSSQHADTVAN
RTFTLLDHNCDNLVTFREFAGWLDTLYCEELNXVRLLYRLHIPPALTESEDDPSLMKSPL
VSTNRPLFVNLPSDVEGEVKDYQEQLKQMLKDLVKQREKDVEKPLPLMNQREFIQFCKTL
YSMFHGDLVENDLFQAIATVTSLVLQIGEVEHRRHSSEGSEVSAEQTPEDAGSSSSDSDW
TVSYAQILASLLTEQALVNFFEKPVDLCAKISEANQKQYEQRAGLLTLQQGR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtggctaaacccggaggaagttctgctgaaaaacgctctgaagctctgggtgaccgtc
aggagcaacgacttcttcctcctgcagaggaggagaggacatggagagcccacaggcagg
atcacaggtctcctggtgggggcgctggactcggtgctggactctaacgccagagtcact
cctttccgcatcctgctgcaggtccccgggtcccaggtcagctgggtcatcgccagcgga
gccgctataggggaagtgaataagcactgggactggctggtccacaacctgctgcactct
ctgtctgtgttcgagaacaaggaggatggggccagcttcgtcagaggaaaagtcaagggt
cttatcgctgaggaggtccgggggcgccaggcggctcaggaggaagaccccgagaagttc
agggagctgctgaggaagttcgagctgcactttggcctcccttcgtcggagaagctggtg
acgtattactcgtgctgctgctggaagggcagggtgccgcggcagggcttcctctacctc
agcatcaaccacctggccttctacgccttcctgctggggaaggaagtgaagtttgtgatc
ccctgggcggaggtgacgcggttggagcgggtctccagcggtctgatgacggaggccatc
cggatcaacacccggaagagacagagggagttctccatgttcctgaacctggacgaggcg
ttcggggtcataggtcagctggcggacatcgccctcaggcggctgctggacagcgaaggc
ctggagctggaccgagtgctgcagcagccggcacgcatcaccaagaggatcctggaggag
caggcgatacgggagtacgtgctggcgttgtttcgcctccctcgggaggagaggctccac
gaggtggcctcctgctcggtgtggaccccccacgctcgctgccacacggccgggaccctc
tacaccaccgactgctacctgtgcttctccagcagagaggagggcagctgcatcctgctc
atccccctctcagaggtgttgtccatagagaaagcggagagcaccagcctgctgcctcac
cccgtcatcgtgagcgtccgcagtaagaaagccttccagctgatcgacctgcacgaccga
gacgagctcgtggaaaacctgaacgccagactgcgatctctgcagtggaagcaggccatg
ttccgaggcaagaaggacggcaagaggagcatgaggtccccgacaccttactacactttc
tattacgacacggatgaagaggagatcgaggagcaggttctgagaaacaccgtcaacagc
gaggctctgatgacggccttccaccaaaaccaaccgggaaccaacggcaacaagagcgtg
gaggaggtgaagcagcgtctgtgggacgatcacttctcagagttcggtcgcggcgtcacg
atgtttcgaacggacaagacacagagactcgttgccatggggatcccagagtctctgagg
ggggagctgtggatgacgctgtcagacgcgtcctcggagctggaggcccaccccgggtac
tacagcggcctggtgcagaggtcgatgggtcagaccagcctgaccacagacgagatcgag
cgggatctgcaccgctcgctgcccgaccatcccgccttccagaaccccaccggcatcgcc
gcgctgaggagggtcctcaccgcatacgcccaccgaaaccccaagatcggatactgccag
tcgatgaacatcctggcgtcggtgctgctgctctacgccaaagaagaagaagcgttctgg
ctgctggtggccgtctgcgagctgatgctgcccgactacttcaaccgcagagtcatagga
gctcaggtggaccagtcggtgttcgaggagttgatccgggagcgtctgcccgagctggcg
gagcacgtgcccgacctctccaccctctcctccgtctccctctcctggttcctcaccctc
ttcctcagcgtgctgcccttccacagcgccgtctgcgtggtcgactgcttcttcttctac
gggatcaaagccatcttccagctgggtctggctgctctggacgccaacgctgaggcgctg
tccgcctgcaccgacgacggccaggcgctcatgatcctctccagttttctggaacaggtg
ggatatgaggagtcgtgttgtcccccgtcctccccccctccgtcctccccccctccgtcc
tccccccccccgtcctcccccccgcccgctatagaggagacctgcagcagcgaggctgat
atccccgccgtgagaagcaccaacatcacggacctcctcaacgagtcgtaccagaaattc
ggggacctgacggtgcggcagatcgagaggcttcgctgtcgacacaggatcttagtgctg
caggcgcacgaagacacaacgaaggagaacgctctgaggttggtgactccagatgtttcc
atctctccagagatcttggccgatgtctacgacctcttcaagacggagcacttcgtcagt
ctgtactggggcgacagcagctcggcggcggcggcggaagcggctgcgtggcggtacgga
gactcgggtcactcctacatggagcggcagtaccatctggaccgggctcagttcaagagc
ctgtacgggctgctggccccgtggcccggctcctcgcagcacgcagacaccgtcgccaac
agaaccttcaccctgctggaccacaactgtgacaacctggtgaccttcagggagttcgcc
ggctggctggacacgttgtactgtgaggagctgaatnnggtccggctgctgtaccgtctg
cacatcccaccagctctgacagaaagtgaggatgacccctctctgatgaagagccccctg
gtgtccacaaacagaccgctctttgttaatctgccgtcagatgttgaaggagaagtgaag
gactaccaggagcagctgaagcagatgctgaaggatctggtgaaacagagagagaaggat
gtggagaagcctctgccgctcatgaaccagcgtgagttcatccagttttgtaagactctc
tacagcatgtttcacggcgacctggtggagaacgacctcttccaggccatcgccacggtt
accagcctggtgctgcagatcggagaggtggaacatcggagacacagctcagaggggtca
gaggtcagcgcggaacaaacccccgaggatgctgggagttcttcgtcggacagcgattgg
acggtcagctacgctcagattctggcgtcgctgctcaccgaacaggcgctggtgaacttc
ttcgagaagcccgtggatctgtgtgcaaaaatctcagaggccaatcagaagcagtacgag
cagcgggccggattactcactctgcagcaggggaggtga
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