Pseudochaenichthys georgianus (South Georgia icefish): 117466678
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Entry
117466678 CDS
T09629
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a
KO
K15188
cyclin T
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117466678 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117466678 (ccnt2a)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
117466678 (ccnt2a)
Brd4/P-TEFb complex
117466678 (ccnt2a)
7SK RNP complex
117466678 (ccnt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
DUF4106
Motif
Other DBs
NCBI-GeneID:
117466678
NCBI-ProteinID:
XP_033965961
LinkDB
All DBs
Position
21:complement(13015705..13024053)
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AA seq
674 aa
AA seq
DB search
MAACRGSSSKWFFTREQLETTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMNHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQESPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVISCVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKGDGTSLNDNSFAGPSMLQDDASLPGGSCNPSFS
KAGAAFMSGPSGDGPLSLESLAGSYNPASHSEWPLGNQSQAGYATSSIKQEPLSIPLQEP
SLLLNAPVYRTDKTLDFIPVKQEQKGGQPPPPQPSPAQKLSLDRYREKQAAEQTVSGHKR
SQEQHGGIMDCDGRGDMLSSSSSTYAPASQVDHRKHSQPHQTSHGVGGGTTASPMKIKAP
SSTSGQERRHHSDKRDKGSLKLRLAVPGSGGGYQLDKGGLPSKDELKMKIKVSSERHSSS
DEGMAANNNNKSKHSSPLVIKEKQHRVADHLHRHHKHSHPHTHSGNGGGGPLRGLPGMEG
PILAPPGSLSSSSRKRAYPEAGHNHHPLSSFSTSCSKVSKNSKGGTVAAGGLRTSQQYPP
PPSESPHEVGEQRH
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcgtcgaaatggttttttacccgggaacagctcgaaaca
acgccgtcccgtcgatgtggagtcgaaccagaccgagagctctcctaccggcaacaagcg
gcaaatctgatccaagatatgggtcagagactcaacgtctcccaactaacaataaataca
gccattgtttacatgcatagattttatatgaaccactccttcaccaaattccacaggaat
ataatctcaccaaccaccttattcttggccgcaaaagtggaagagcaacctcggaaactc
gaacatgtgatcaaagtggcacatgcttgcctcaatccccaagaatcgcctctagacaca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctacacctcactacgttctgcctccagtacaaacccacagtgatctcctgtgtgtgcatc
cacctggcctgtaagtggtcaaactgggagatcccagtttccactgatgggaaacactgg
tgggagtatgtggacaactcggtcaccctcgagcttcttgatgagttgacccacgagttt
ctgcagattctggagaagacgcccagccggttaaagaggattcgcaactggagggcaaca
caagctgccaaaaagccaaagggtgacggcacatcgttgaatgacaactcctttgccggg
ccttccatgctccaagatgatgcatcactccctggtggctcctgcaacccaagtttttcc
aaggcgggcgctgccttcatgtctggcccctccggggatggacccctgtctctggaatcc
ttggctggctcatacaacccagccagccacagcgagtggcccctgggtaaccagagccaa
gcagggtatgctacctccagtataaaacaggaacccctcagcatccctctgcaagagccc
tccctgcttcttaatgcgccggtatacaggactgataaaacactggacttcatacctgtc
aaacaggaacaaaaaggaggccagcctcctccaccacaaccgtctccagctcagaagctg
tctctggacagatacagagagaaacaagcagcagagcagactgtctcggggcataaacgc
agccaggaacagcatggaggaataatggattgtgacgggaggggggacatgttatcttcc
tcctcatctacctatgcacccgcgagccaagtagaccatagaaaacattcacagccccac
caaacatcccacggtgttggtggaggcaccactgcctccccgatgaaaattaaagccccc
tcctcaacttcagggcaagaaagacgtcatcatagtgacaagcgggacaaaggctcactc
aagctccgcctggctgtccccgggtctggcgggggctaccagctggacaaaggcggactg
ccaagcaaagacgagctcaagatgaagataaaagtctcatcggagcgccacagctcatcg
gacgaaggcatggcggccaacaacaacaacaagagcaaacattccagccctctggtgatt
aaggagaaacagcaccgtgtagcagatcacctccatcgccaccacaagcacagtcatcct
cacacacacagcgggaatggcgggggaggcccgctacgggggctgccgggcatggaaggg
cccatactcgctcctccaggatccctgtcttcctcatcgcgcaagagggcgtaccccgag
gccggccacaaccaccaccctctctcctcattctccacctcatgctccaaagtgagcaaa
aactccaagggtggcacagttgctgcaggtgggctgcggacctctcagcagtaccctcct
cctcctagtgaatcgccacatgaagtgggagagcagagacactga
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