Pseudochaenichthys georgianus (South Georgia icefish): 117466828
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Entry
117466828 CDS
T09629
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117466828 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117466828 (nup62l)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117466828 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
117466828
NCBI-ProteinID:
XP_033966194
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All DBs
Position
21:28992444..28995097
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AA seq
650 aa
AA seq
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MSGFNFGQASTGFSFGTQKPAAAVPGFGMSSSTPAAPGGGFSFGTPTQAAANPNPAGSFS
FGTPAATTAASGGFSFGSPAASFGMATPQQTAVAPGMSMGAAPGMSMGAAPGMSMGAATG
MSMGAAPGMSMGAAQGMSMGAAQGMSMGAPQGMSMGAAQGMSMGTAQGMSFGSAQGMSMG
SAQGMSMGSAAAPPAGSGFTLGTAMSAQTTAPATGGFSFGTPAQTQPVAQPQLAAAPTAA
VTATTGAGGLSFGGFSFGANKVQATAAATTAAPIAAPGGGFSFGTAAPSNLTLGMQPQPA
PTAAATTGQGGGFAFGIKPSTTPAPPASIQPTLATGPSLFASPISAAPAAAAAAAAAAAS
AAAATTASLTGFTMGAAPTLAASTAAATTTAAGGALAFMLKPLGAATITSASVPTAAATT
GAVTGFSLGLKPSTGMSLATTTTATAIPTTTAPPVMTYAQLEGLINKWSLELEDQERHFL
QQATQVNAWDRMLVENGEKITSLHKEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEE
SVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQ
QICKILNTHMDSLQWIDQNSVLLQRRVEEVSKSCDNQRKEQEKSFRLTFD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagtggattcaactttgggcaagcctccactggcttttccttcgggacccagaagccc
gcagccgcagtcccgggcttcggcatgagcagctccacacctgcggctccgggaggcggc
ttctccttcggcactccgactcaggccgccgccaaccccaacccggccggctcctttagc
tttggcaccccagcagcgaccacagcagccagcggaggcttttctttcgggagccccgct
gcctcatttggaatggccactcctcaacaaacagcagtagcaccagggatgagtatgggc
gccgcaccagggatgagtatgggcgccgcaccagggatgagtatgggcgccgcaactggg
atgagtatgggcgccgcacctgggatgagtatgggcgccgcacaaggaatgagtatgggc
gccgcacaagggatgagtatgggcgccccacaagggatgagtatgggcgccgcacaaggg
atgagtatgggcacggcacaagggatgagttttggctccgcacaagggatgagtatgggc
tccgcacaagggatgagtatgggctccgcagcagctcctccagccgggtcagggttcacc
ctgggcacagctatgtctgcacagaccaccgcccctgcaacagggggcttctcttttggg
actcctgctcaaactcaaccggtagctcaaccccaacttgcagcagcaccaacagctgca
gtaaccgcaactacaggagcagggggtctctcttttggagggttcagctttggagcaaac
aaggtccaggcgaccgcagcagccaccactgctgcccctatcgctgccccaggagggggc
ttcagctttggtacagctgctccatccaacctcactctgggtatgcagcctcagccagcc
cctactgctgcagccacaaccggccagggtggaggatttgcctttgggattaaaccctct
accaccccggctcctcctgcctccatccagccgaccctagctacaggcccgtctctcttt
gcttcacccatctctgcagcacctgcggctgcggctgctgcggctgcggctgctgcttct
gccgccgccgctacaacagcgagccttacaggcttcactatgggtgcagctccaacttta
gctgcaagcactgcagctgcaacaaccacagcagctggtggagctctggctttcatgctc
aaacctcttggggcagctaccatcacctctgcctctgtccccactgctgccgctacaaca
ggtgctgtgacaggcttttcactgggactcaaaccttcaaccggcatgagcctcgccaca
acaactacagcaactgcaatccctacaaccacagctcctccagtgatgacctatgcccag
ctggagggtctcattaacaagtggagtcttgagctggaggaccaagagagacatttctta
cagcaggctactcaggtgaacgcctgggaccgcatgctagtggagaacggggagaagatc
acatccctgcacaaggagatggagaaggtgaagctggaccagcgcaggctaaaccaggag
ctggatttcatcctgtcccaacagaaggagctggaggacttactctgcccgctggaggag
tctgtgaaggagcagagcggaaccatctacatgcagaacgccgacgaggaacgtgaaaga
acgtacaagctggccgagaacgtggacgctcagctgaagaggatgtctcaggacctgaag
gagatcatcgagcacctgaacacatccagtggcccggcagacaccagtgacccgcttcag
cagatctgtaagattctcaacacccacatggattcactgcagtggatcgatcagaactcg
gtccttctgcagagaagagtggaggaagtgtccaaatcgtgtgacaaccagcgcaaagag
caggagaaaagctttcgtttaacatttgactga
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