Pseudochaenichthys georgianus (South Georgia icefish): 117466968
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Entry
117466968 CDS
T09629
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117466968 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117466968 (dis3l)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117466968 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
GFO_IDH_MocA_C3
Motif
Other DBs
NCBI-GeneID:
117466968
NCBI-ProteinID:
XP_033966401
LinkDB
All DBs
Position
3:15564530..15591588
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AA seq
1043 aa
AA seq
DB search
MIKTERILHLKSCRGRKVRVVREHYLRERVPCYSSLCQAGCENDGKVLPGDLTHYVIPDA
GVSGDYLEILEFRELQGIIFTQTSCQGVQHSKGRRQYKRLRNLLKDPRHDCVPFANEFQE
YSYCPREKGESQEKWQTRCVYSAAVWYYNHLAGMMDVVMITEDQEAVAQYSSLNSGVYVI
SVQDYLRNFCPELQVAHDLYSSISQALQEKESEGMEREYTEHLPGELLEAGIKSGRYIQG
TLNVSKHRAHSEASIMTDGLSNKNTDQSWGVLVCGGKNRNRAVHGDQVVVELLPKSEWRG
KDNTLAEGQGEEKSGEESGSKPMPTGRVMGILQRNWRDYVVTFPPREGPPPQTRNTQRIL
AVPWDHRIPKIRISTQQADALQDHRVVVRIDSWESTSLYPNGHSVRVLGKAGELETEIQT
ILIENCIHVPPFSDAQLKEMPVNSAEKPWRMDPAQVAERRDLRESHLVFSIDPKGCEDVD
DTLSVRSLAGGKLLELGVHIADVTHFVTEGSLTDLEARSRATTYYLADRRYDMLPGVLSA
DLCSLLGGVDRYAMSVMWELDAETLVVNKVWFGRSLIRSSYQLHYELAQALLDGEQTEVP
ELAGLGSEEKDSKLAQLTQALEMLTHVARHLRAQRDRGGALELEGVEVRAQLDKDKNITA
LVPRQPLEVHETVAECMIHANHWVARKIQETFPHQALLRRHPPPRQEFFSQLVESATAGG
FTIDTSTNKALADSLDQAVDPQDPMVNRLLRIMATTAMSQAVYFSTGLQSLDQFYHYGLA
LDRYTHFTSPIRRYADIVVHRLLTAAITMDRGVDPGKALASNKELEETAHHINNKNRAAQ
QAQKISTELFQCLYFKERDPQSDQSCVADAVIYSIRDNGVLVFISEYGVKGPVYLRNREG
QVVAVGPEGSCEWQSGSVRRYSDHISTTSSCGTSTFRLFDHISVRISVRSTNCHADTLTL
EVTSNRPLLSAGPQQPRSQGRSQLVQEVVRLAEEAAQEKASRKPKVSKEEREFSQSKTPN
LYSLLEEIRELALLDLEGGGAGL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgattaagacggagaggatcctgcatctgaagagctgccgcgggaggaaggtccgtgtg
gtccgggaacattatctgagagagagggtcccctgctacagctccctgtgtcaggcgggc
tgtgagaacgatggcaaggtgctgccaggagacctgacccactatgtgattcctgatgcg
ggggtgtcgggggactatctggagatcctggagttcagagagctgcagggcatcatcttc
actcagacctcctgccagggggtgcagcacagcaaaggacgcaggcaatacaagcgtctg
cggaacctgctcaaagaccctcgacacgactgcgtgccgtttgccaatgaatttcaggag
tattcatactgtccacgagagaagggggagagccaggagaagtggcagaccaggtgtgtg
tactctgcagcagtttggtactacaaccacctggcaggtatgatggatgtagtgatgatc
actgaggatcaggaagccgtggctcagtacagcagcctcaactctggggtttacgtcatc
tctgtccaggattatttaagaaacttctgtccggagctgcaggtagcacacgacctttac
agctccatttcccaggcgctacaagagaaagagagtgagggcatggagagggagtacaca
gaacatctacccggagagctgctggaggccgggatcaagtctgggcggtacattcagggg
actctgaatgtcagcaagcaccgcgcacacagtgaagcttcaatcatgacggacggtttg
tccaacaagaacacagatcagagctggggcgtgttggtgtgtggagggaagaatcgtaac
agggcggtgcatggcgaccaggttgtggtggagctgttgccaaagagcgagtggagaggg
aaggacaacaccctggctgagggtcagggggaggagaagagcggagaggaaagtggaagt
aaacccatgcccacaggccgtgttatggggatcctgcagaggaactggagggactatgtg
gtgactttcccccccagggaggggcctccgccccagaccaggaacacccagcgcatcctg
gccgtgccctgggaccatcgcatccccaagatccgcatcagcacccagcaggccgacgct
ctgcaggaccacagagtggtagtgcgcattgactcctgggagagcacgtcgctctacccc
aacggccacagtgtgcgggtgctgggtaaagctggggagctggagacagagatccagacc
atcctcatcgagaactgcatccacgtgcctccattctcagacgcacagctgaaagagatg
cccgtgaactctgcagagaagccgtggcggatggacccggctcaggtggcggagcggcgg
gacctccgggagagtcacctggtgttcagcatcgacccgaagggctgcgaggacgtggac
gatacgctgtctgtacgcagcctggccggcgggaagctgctggagctgggggtccacatc
gctgatgtcacacactttgtgacagagggctcgctcaccgacctggaggcacgttcaagg
gcaaccacgtactacctggccgaccgcaggtacgacatgcttcccggtgttctcagtgca
gacctctgctctcttctgggcggagtggacaggtatgcgatgagcgtgatgtgggagctg
gatgcagagaccctcgtggtcaacaaggtgtggttcggccgctcgctcatccgctcctcc
taccagctgcactacgagctggcccaggcgctgctggacggggagcagacggaggtgccg
gagctggccgggctcgggtctgaggagaaggattctaaactagcccagctcacccaggct
ctggagatgctgacacacgtagccagacacctgcgggcgcagagggaccgggggggggcg
ctggaactggaaggggtggaggtgcgtgcccagctggataaggacaagaacatcacagcg
ctggtcccccgtcagcctctggaggtccacgagacggtggctgagtgcatgatacacgcc
aaccactgggtggctcgcaagatccaggagaccttcccccaccaggccctgctgaggcgc
cacccgcccccccggcaggagttcttcagccagctggtggagagcgccacggccgggggc
ttcaccatcgataccagtactaacaaggctctggcggactctctggaccaggccgtggac
ccccaggaccccatggtgaacaggctgctgagaataatggccactacagccatgtcccag
gctgtgtacttctccactggtcttcagtccctagaccagttctaccattacggtctggct
ctggaccggtacacacacttcacctcacccatccgtcgttatgccgacatcgtggtgcac
cgccttctcaccgctgccatcactatggacaggggggtggacccgggtaaagcgttagcc
agcaacaaagaactggaggaaacggctcatcatatcaacaacaagaacagggcagcccag
caggcgcagaagatctccacagagctgttccagtgcctctacttcaaagagagagaccct
cagtccgaccagagctgtgtggcggacgccgtcatctactccatcagagacaacggcgtc
ctggtgttcatctcagagtacggggtgaagggcccggtgtacctgaggaaccgtgagggc
caggtggtggcagtgggaccggagggcagctgtgagtggcagagcggctccgtgagacga
tactcagaccacatctccaccacctccagctgcggcacctccaccttcaggctgttcgac
cacatctctgttcgtatttctgtgcgctccacgaactgccacgctgacaccctaaccctg
gaggtcaccagcaacaggcccctcctcagtgcggggccccagcagccccgctcccagggc
cgcagccagctggtgcaggaggtggtgcgcctggcagaggaggcggcccaggagaaggcg
tcccggaagcccaaagtctctaaagaggagagggagttcagccagagcaagacccccaac
ctgtactccctgctggaggagatcagagagctggctctgctcgacctggagggggggggc
gcaggtctgtga
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