Pseudochaenichthys georgianus (South Georgia icefish): 117467119
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Entry
117467119 CDS
T09629
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117467119 (hoxd3a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117467119 (hoxd3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
DUF3614
Motif
Other DBs
NCBI-GeneID:
117467119
NCBI-ProteinID:
XP_071063181
LinkDB
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Position
21:complement(28499889..28518304)
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AA seq
405 aa
AA seq
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MQKATYYDNSGLFGGYTFPKPDSYNYGPAHQSYPASNIENDYQASVCPIQTSAVRPPTLK
DSDLNADCMRQSGSQSSSSSSSQATSIVEQQAPPLSASSPSPNSSAPPKKKSPPSSASST
ATPTLTKQIFPWMKETRQNSKQKGSSCSGAGRDQDAGEMSDEKSPPGPASKRVRTAYTSA
QLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGLAHSPLG
HSPDRSPPMSGPNHIGYSGQLQNVNSLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQ
QKRYPGSEYEHHAMQSNGGFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSTSV
DYSCAAQIPGNHHHGPCDPHPTYTDLTSLQASQGRIQEAPKLTHL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcaacatactacgataactctggactgtttggagggtacaccttccccaaa
ccagactcctacaactatggccctgcccaccagtcctaccctgcgtctaacattgagaat
gactaccaggcctcggtgtgtcccatccagacctctgctgtccggcccccgaccctcaaa
gacagtgacctgaacgcagactgcatgcggcagagcggcagccagagcagcagcagcagc
agcagccaggccaccagcatcgtggagcagcaggcacccccactgtctgcatcctctccc
agccccaacagctctgcacccccgaagaagaaatccccacccagcagcgcttccagcact
gccacaccgaccctcactaagcagatcttcccctggatgaaggagacccggcagaactca
aaacagaagggcagcagctgctccggcgcaggtagagatcaggatgctggagagatgagt
gatgagaagagcccaccgggaccggcctccaagcgggtcagaactgcttacactagcgca
caacttgtggagctggagaaggagtttcactttaaccgctacctgtgtcgcccacggaga
gtggagatggcgaatctgttgaatctcaccgagcgtcaaataaagatctggtttcaaaac
aggaggatgaaatacaaaaaggaccagaagtctaaagggctcgcacactctcccctggga
cactccccggacaggagtccaccgatgagtggcccaaatcacattggatactctggtcag
ctccaaaacgtgaacagcctcagctatgacgcgccctcgcccccatccttcgccaaaccc
cagcaaaacatgtacggtttggcggcgtacacggcacctctgggtggctgcatcccgcaa
cagaagaggtacccgggctccgagtacgagcaccacgccatgcagagtaacggcggcttt
gccaacgccaatttgcagggcagccccgtttacgtgggggggaattttgttgattccatg
ccagcctcgggccccatgttcaacctcggccatcttccccacccctcgtccaccagtgtg
gactacagctgtgccgctcagatcccaggaaaccaccaccatggaccctgtgatccccat
cccacatacacagacctcacctctctccaagcatctcagggaaggattcaggaagcgcct
aaactcacgcatttgtaa
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