Pseudochaenichthys georgianus (South Georgia icefish): 117467351
Help
Entry
117467351 CDS
T09629
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117467351 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117467351 (lrfn5a)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_1
LRR_4
ig
Ig_2
LRR_9
fn3
C2-set_2
Ig_5
Sp38
Motif
Other DBs
NCBI-GeneID:
117467351
NCBI-ProteinID:
XP_033966808
EnsemblRapid:
ENSPGEG00000006601
LinkDB
All DBs
Position
22:complement(27656996..27892371)
Genome browser
AA seq
849 aa
AA seq
DB search
MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFITTVKRKDFANMTRLVDLTLSRNTISFITSHAFADMENLRALHLNSNRLTRIANDTF
SGMSKLHHLILNNNQLVVIHQEAFNDLLALEELDLSYNNLDSIPWEAIQRMISLHTLSLD
HNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTATSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQQLSGRYFWSVPEEEFLCEPPLITRYSHEMRVL
EGQRVTLRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTIELIIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDIITSLTATRVVGCVQFSTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQGCTVTPSSSKHGSIGLDDL
SGGSTKRGGKDTVTQSSDSSLPDCSTATSVLSQSWAARSPTAEDREKGGEERAMGGVSSP
TGTLPKPKRKPAPGKPGGSSTSAPPENPPSPSPRPPSSPYSTPSSVLLPSTPLENLNTNR
NNSTSLNQTPPPYVPSPYPTLPFKPSPVPSIRFSETPILRRAPRGASASSKYLTLPAEEL
GRSRARRRNSLCDGGSKTHPAHQGAAGPPKIGRIMRNKRSQSMSGILLPKDGESDKGRCD
SDWILESTV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcagttgccatggcagtgcgggcacagatc
tgcccgaagcgttgcgtgtgtcagatcctgtcacccaacctggcaaccctctgcgccaag
aaaggtcttctgttcgtcccgcccaacatcgacaggcacacggtggagctccggctggcc
gacaactttatcacaactgtgaagaggaaagatttcgcaaacatgacgcggctcgtagac
ctaacattatccagaaacaccatctccttcatcacatctcacgcctttgccgatatggag
aacctcagagctttacaccttaacagtaaccggctgacgaggatagccaatgatacgttc
agcgggatgtcgaagctccaccacctgatcctgaacaacaaccagctggtagttatccac
caggaagcgttcaacgacctgctggcactggaagagttggacctgagctacaataacctg
gactctattccttgggaggccatccagagaatgattagcctccatacgttgagtttagac
cacaacatgttggactacatcccagagggaacattttccctgctacagaaactcaaccgg
ctggacgtcacctctaataaactccaaaagctgccaccagacccactttttcaacgagca
caggttctggcaacatcagggatcatgactgccacttcttttgcgttgtcattcgggggg
aaccctctccactgtaactgtgagctgctgtggctgcggaggttgaaccgagaagacgac
ctggagacatgcgcttcacctcaacaactctctgggcgctacttctggtctgtccctgag
gaggagttcctatgcgaacctccactcatcacaagatattcccacgagatgagggtgctt
gaaggccagagagttactctcaggtgtaaggccagaggtgacccggagccagccatccac
tggatctctcctgagggcaaactggtgtccaactcctccagaacgttggtctacaacaac
gggactctggacatcctcatcagcacggtgaaagacaccggctccttcacctgcatctcc
tccaacccggccggtgaagcccaccaaacaatagagctcattataataaagctcccccac
atctccaacaacaccaacaacatacaggagcccgacccgggatcctcagacatctccacg
tcgactcgaggaggggccaacgggagcaacgtgacgggcgacgtgaagggcggggtggac
aagagggtggtgacagccgaggccacgtcatcgacggcgctgatcaagttcaacttccag
aggaatattccgggaatcaggatgttccagatacagtacaatgggagccaagatgactcg
ctggtttacaggatgatccccccatccagcaagaacttccttgtcaacaacctggcggcg
gggacgcagtacgacctctgcgtgctggccatctatgatgacatcatcacctccctgacg
gcgacgcgcgtggtgggctgcgttcagttctccaccgagtcggagtacatgaggtgtcat
ttcatgcagtctcagttcctcggcggcaccatgatcatcatcatcggagggataatcgta
gcctcggtgctcgtcttcatcatcatcctgatgatacgctacaaggtgtgtaaccctggg
gagggcggtaaaggcgtctccttgtcgatgaccaacgttcactcgcagaccaacgggcag
cagggatgcaccgtcacccccagctcctccaaacacggctccatcgggttggacgacctc
tctggaggctcaacgaagagggggggcaaggataccgtcactcagtcgtccgactcctcc
ctgcccgactgctccaccgccacctcggtcctcagccagtcctgggcggccaggagcccg
acagccgaggaccgggagaaggggggtgaggagagggccatgggtggggtctcgtcgccc
accggcaccctccccaagccgaagcgtaaacctgctccaggaaagccgggcggttccagc
acctcggccccccctgaaaacccaccatccccctcccctcgccctccttcctcgccatac
tccaccccctcctccgtgctcctgccctccacccctctggagaacctcaacaccaaccgc
aacaactccacctcgctcaaccaaaccccgcctccttacgtcccttcaccttaccccacc
ctgccgttcaaaccgagccccgtcccctccatccggttcagtgagacccccatcctgcgc
cgggccccccgtggcgcctccgcctccagcaagtacctgactctccccgcggaggagctg
gggaggagcagggcgaggaggaggaactcgctctgtgacggaggctcaaagactcacccc
gcccatcagggagcagcaggaccgcccaaaatagggcggataatgcggaacaaaaggagc
caatcaatgagcgggattctactccccaaagacggagaatcggacaaagggcggtgcgac
tcggactggatcctagagagcaccgtttga
DBGET
integrated database retrieval system
