Pseudochaenichthys georgianus (South Georgia icefish): 117467493
Help
Entry
117467493 CDS
T09629
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117467493 (six4a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117467493 (six4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
DUF6374
Motif
Other DBs
NCBI-GeneID:
117467493
NCBI-ProteinID:
XP_033967023
LinkDB
All DBs
Position
22:15087114..15093495
Genome browser
AA seq
671 aa
AA seq
DB search
MSSSSAGEVTTANDIKRENVKESEKRECIKLVALDAADLSMERNTDAVRTELLVSAASSL
AFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAYHQARYQELY
SILENHSFSPSNHTFLQDLWYKARYTEAEKARGRPLGAVDKYRIRRKYPLPRTIWDGEET
VYCFKERSRNALKDLYTQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEAQS
KSESDGNHSTEDESSKGQDELSPRPLSNSSDGVITHGTLPIQSGPMDSGVVIQQIGDIKL
PAGSNGGSLYNGSLVTSNNGVFHNGGSSYLHTPGNILFNGLNLGIQPLAFNPLRSSGGVL
LGGSGMDMQMQTGQEKGLGSSAEDSALQYASYSGCVNGSEVKLEGVHTMAAQNGGSSVLT
YSSSSGALQLGGYSLIQVPSGVSDSDGSSLLNSDIGLPPLQLSSGSSSSAITQGTMSLNN
VAVRSPSNDSFQQQDKLAMTSLHHSTVLYSMGNAGQTSIKKEPLEGGVYSSYHHGLHLDA
SGQLSYTTPNSEEVPSSRGPASSTNVSAVSSSSPEPEVYTTLTVSTPLMAHQTDHSSHHL
HPSEYLGGHEIRGHLMGSGMNNNYMNLSDNKVGSGGVSEMVRAMCGEMEAVEGKELAKLQ
TVQMEEDMADL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttctgctggagaagtcacaacagctaatgacatcaagagggaaaatgtg
aaggagtcggagaagcgggagtgcatcaagcttgtggcgctggacgcggcggatttgtcc
atggagcgcaacacggacgccgtgcgcacggagctgttggtgagcgcggcttcctctctg
gctttctccccggagcaagtggcgtgtgtctgcgaggctctgcagcagggaggcaatgtg
gaccggctggccaggttcttgtggtccctgccgcaaagtgacctgctccgcggcaacgaa
agcatcctgaaagcccaagccctcgttgcgtaccaccaggctcggtaccaggagctgtac
agtattctggagaaccacagtttcagtccgtccaaccacacctttctgcaagatctgtgg
tacaaagcccggtacaccgaggcggagaaggcgagggggagacccctgggtgccgtggac
aagtacaggatccggagaaaataccctctccccaggactatctgggacggcgaggagact
gtgtattgtttcaaggagaggtcccggaacgcgctgaaggatctgtatacccagaatagg
tacccctcgcccgccgagaaaagaaatctcgccaagattacaggactctccttgacccag
gtcagcaactggttcaaaaacaggagacagagagacagaaacccgtccgaggcacagtca
aaaagtgaatccgatggaaaccacagcacagaggatgagtcaagcaaaggccaggatgag
ttgtctccccggcccctctctaactcctcagatggggtaatcacccatgggaccctgccc
attcaatcagggcctatggacagtggggtggtcatccaacagatcggggacatcaagctg
cctgctggatcaaacggtggcagtctctacaacggaagtctggtcaccagtaacaacggc
gtgtttcacaacggtggctcgtcttaccttcacacgcctggaaacatcctcttcaacggg
ctcaatctgggcatccagccgctggccttcaaccctctgaggtcatctgggggggtgctg
ctgggaggctcgggtatggacatgcagatgcagactgggcaggagaagggactgggcagc
tctgcggaggactcggccctgcagtacgcctcctactcgggctgtgtgaacggatcagag
gtgaagctggagggggtccacaccatggctgctcagaacgggggctcctccgtgcttacg
tacagctcctcgtcaggggcgctccagctggggggctacagcctgatccaggtaccaagt
ggagtctctgacagcgatggcagctcattactcaacagcgacataggtcttcctccactg
cagctctcttccggctcatcttcctcagcaatcacacaaggtaccatgtctctgaacaat
gtagcggtgcgttcccccagtaacgactccttccagcagcaggacaagctggctatgacg
tccctgcaccacagcacagtcctctacagcatgggcaacgccggccagacgtccatcaag
aaggagcctctggagggaggcgtatactcctcctatcaccacggcctccacctggacgcc
agcggtcagctcagctacaccaccccaaattcagaggaggttccgtccagccgaggtccc
gcctccagcaccaacgtctccgcagtcagctcgtccagccctgagccagaggtctacacc
accctcaccgtcagcacgccgctgatggcccaccaaacggaccacagcagccaccacctc
cacccctcagagtacctcgggggccacgagatccggggccacctgatgggctccggcatg
aacaacaactacatgaacctttccgataacaaggtgggctcgggaggtgtgagtgagatg
gtgcgggcgatgtgtggggagatggaggctgtggaagggaaggagctagccaaactacag
acagtgcagatggaggaggacatggctgacctttga
DBGET
integrated database retrieval system
