Pseudochaenichthys georgianus (South Georgia icefish): 117467496
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Entry
117467496 CDS
T09629
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
pgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117467496 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
117467496 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117467496 (mnat1)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117467496 (mnat1)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117467496 (mnat1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117467496 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
TcdA1_RBD_2
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
117467496
NCBI-ProteinID:
XP_033967025
LinkDB
All DBs
Position
22:complement(15054294..15086975)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKRDFDFPGLREYNDFLEQVEDIVFNLTNNIDVENTKL
RMEQYQKENRDLIQRNKVKLSREHEDLEELLLQEQQGNEQRRLDLLQEEQRQLQAKRKNK
QALLDELEKSQLPATILLAQHKVRAAKLETQIEQQKLAVKPTNLFSTGIHMRQTVSLQPV
PKIEEVLYQYKALHVETYGPLVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRAVQ
DAFSGMFVFKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaggggtgtccgagatgcaaaacaaccaagtacaggaacccgtcgctgaag
ctgatggtgaatgtctgcggccacacgctatgcgagaactgcgtggagatgctgtttgtc
cgcggctcgggtaactgcgtccagtgcgacacgcccctgaggaagagcaacttccgcgtg
cagctcttcgaagacccggctgtcgataaagaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccggcctgagagaatataatgacttcctggag
caagtggaagacatagtgtttaacctgacaaacaacatagatgtggagaacactaagctg
cggatggagcagtaccagaaggagaacagagacctcattcagaggaataaagtgaaactg
tcgcgagagcacgaggatctggaggagctgctgttacaggagcagcagggcaacgagcag
cggcgcctggacctgctgcaggaggagcagaggcagctgcaggccaagaggaagaacaag
caggctctgctggatgaactggagaagtctcaacttcctgccaccatcttgctcgctcaa
cacaaagtccgtgctgccaagctggagacgcagatcgagcagcagaaactggccgtcaaa
ccgacaaacctattttcaactggaattcatatgcgacagacagtgtctcttcagcctgtt
cccaaaatagaggaagttctgtaccagtacaaggcccttcacgttgaaacctacggaccc
ctagtgcctgaactggagcagctgggcagactcgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcctgtcaccgagctgttcag
gacgctttcagtgggatgttcgtctttaaacgctga
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