Pseudochaenichthys georgianus (South Georgia icefish): 117467511
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Entry
117467511 CDS
T09629
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X2
KO
K04648
dynactin 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117467511 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117467511 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117467511 (dctn1b)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117467511 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117467511 (dctn1b)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117467511 (dctn1b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117467511 (dctn1b)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117467511 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
117467511
NCBI-ProteinID:
XP_033967050
LinkDB
All DBs
Position
22:5172777..5211824
Genome browser
AA seq
1265 aa
AA seq
DB search
MSQTRRNTYTRTTSSGSSRMSSDGGGRPIKVGSLVEVIGKGQRGAVAYIGNTLFASGKWV
GVILDEAKGKNDGTVQGKRYFTCGENRGIFVRQSQIQLFDDGADTTSPETPEPGTGKIPK
REILETPKSTKLRGVKLKKTPAPRKTMVRRPKQPTRPTTGKGAASGSASASAGEMSSSEP
STPAQTPLAAPVIPTLHSPGNPPPPAPSKEEEALRLQVKDLEEKLETLKMKRTEDKAKLK
ELEKHKIQLEQLQEWKTKMQEQQAELQKHLKEAKREAKEAQEAKEHYMEEMSDTADAIEM
ATLDKEMAEERAESLQLEVDSMKEKVEELTMDLEILKHEIEEKGSDGAASSYHVRQLEEQ
NGRLKEALVRMRDLSSSEKQEHLKLQKQMEKKNVELDALRGQKENLQEERTAAEKTIDEL
KEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMNDELQENARETELELR
EMLDLGTAKIRESEKHVEAAQETVADYQQTIKKYRELTAHLQEVNRELTSQQEASAELQQ
QPAPEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRHVSLLTSFMPESFLRHGGDHDCI
LVLLLIPRLICKAELISRQAQEKFDLNESSAQLAGLKGAAGEQLSFAGGLVYSLSLLQAT
LHKYEQALAQCGVDVYKKIGTLYPEMSVHERSLDFLIDLLHKDQLDETVNVEQLTKAIKY
YQHLYSIHLADQSEDCTMMLADHIRFTQSALDCMSVEVGRLRAFLHAGQEKSGLAVLLKD
LETSCSDTRQFCKKIRRRMPGTDAPGIPAALSFGQQVCDTLSDCRKHLTWVVAVLQEVAA
AGAQMVSPLGEQEGLAALKLEDVAFKAGEQIYGSQGVNPYDSLRQSCGMVIATMNKMATA
MQEGEYDSERPQNKNPPPVDLRAAALRAEITDAEGLGMKLEDRETVIKELKKSLKIKGEE
LSEASVRLSLLEKKLDSSSKDADERVEKIQTRLDEAQTLLKKKEKEFEETMDALQADIDQ
LEAEKAELKQRIGSQSKVGPDGLRGASPSGIASIVSGGAGANMMSAVGSASGLQVVDSPL
LSQQIDAQRLCIKHLKNENNRLKAEKMRAQLASLPPLHVTKLPCGEGGRPEVLSSALYRK
TDQLLETLLQMSANVKVVDITGKSPVTPGAQLLEQTARLQSLSDTLGRLKDEVAEHVVHQ
QPGARVSSDFATFPSTLFVKAKEERQGDTVLVGRVMVPCSRGQEQVHRLVLSQTQLHRVH
SLLRT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagactaggaggaacacgtacacccggaccaccagcagcggcagcagcaggatg
agctcggacgggggcgggcggcccatcaaagtgggctccctggtggaggtgatcgggaag
gggcagcgcggcgcggtggcgtacatcggcaacacactgttcgcctccggaaaatgggtg
ggggtcatcctggacgaagctaagggcaagaacgacggcacggtgcagggcaagcgctac
ttcacctgcggggagaaccgagggatattcgtgagacaatcacagatccagctgtttgat
gatggagccgacacgacgtctccagagacgcctgagcccggcaccggcaagattcccaaa
cgagagatcctggagacgcccaagtccaccaaactgcgaggagtgaaactcaaaaagact
cctgcaccccggaagaccatggtcagaaggcccaagcagcccacccgccccaccacaggg
aagggggctgcgtccggctcggcctcggcctctgcgggggagatgagcagcagcgagccc
agcacgccagcccaaacccctctggctgctccggtcatccccaccctccactcccctgga
aaccccccgccaccggcccccagcaaggaggaggaggcgctgcgtctgcaggtgaaggac
ctcgaagagaagctggagacgctgaagatgaagaggacggaggacaaggccaagctgaag
gagctggagaagcacaagatccagctggagcagctgcaggagtggaagaccaagatgcag
gagcagcaggccgagctgcagaaacacctgaaggaggccaagagggaggctaaagaagcc
caggaggcgaaggagcactacatggaggagatgtcggacacggcagatgcgatcgagatg
gcgacgctggataaggagatggcggaggagcgggcggagtctctgcagctggaggtcgac
tccatgaaggagaaagtggaggagctcaccatggacctggagatcctcaaacacgagatc
gaggagaaaggttcggatggagcggcctccagttaccatgtgaggcagctggaggagcag
aacggccgactgaaggaggctctggtcaggatgagagacctgtcgtcgtcggagaagcag
gaacatctgaagttgcagaagcagatggagaagaaaaacgtggagctggacgccctgagg
ggccagaaggagaatctgcaggaggagaggacggccgcggagaagaccatcgacgagctc
aaagaacaggtggatgcggctctgggggcggaggagatggtggagatgctgacggagagg
aacctggacctggaggagaaggtccgggagctgagagagaccgtcaccgacctggaagcc
ataaacgagatgaacgacgagctgcaggaaaacgcccgggagacggagctggagctgagg
gagatgttggatctgggaacggcgaaaatcagagagtcggagaaacacgttgaagcggcg
caggagaccgtggccgattaccagcagaccatcaagaagtaccgtgagctcacggcacac
ctgcaggaggtgaacagggagctgaccagccagcaggaagcctccgccgagctgcagcag
caaccggccccagagatgtttgatttcaagattaagtttgcagagacgaaggcctacgcc
aaggccattgagatggagctgaggaagatggaggtgggtcaggctaacagacacgtctct
ctgctgacctccttcatgcccgagtccttcctgcgtcacggaggggatcacgactgcatc
ctggtgctgctgctcattcccagactcatctgcaaggcggagctgatcagcaggcaggcg
caggagaagttcgatctgaacgagagctctgcgcagctggccgggctgaagggagcggcc
ggagagcagctgagcttcgctggaggactggtctactctctcagtctgctgcaggccacg
ctgcacaaatacgagcaggctctggctcagtgcggtgtggatgtctataagaagatcggc
actctgtacccggagatgagcgtccacgagcgctctctggacttcctgatcgacctgctg
cacaaagaccagctggatgagaccgtcaacgtggagcagctcaccaaggccatcaaatac
tatcagcacctgtacagcatccacctggcggatcagagcgaggactgcaccatgatgctg
gctgatcacatccgatttacccagagtgctttggactgcatgtcggtggaggtggggcgc
ctgcgggcgttcttgcacgcgggccaggagaagtcgggcctggcggtgctgctgaaggac
ctcgagacgtcctgcagcgacacccggcagttctgcaagaagatccgccgcaggatgccg
ggcaccgacgcgccggggataccggcagcactcagctttggacaacaggtgtgcgacacg
ctgtcagactgcaggaagcacctgacctgggtggtggcggtgctgcaggaggtggcagca
gccggagctcagatggtgtctcctctcggggagcaggagggactcgctgccctcaaactg
gaggacgtggccttcaaggccggagagcagatctatggctctcagggagttaacccctac
gatagtctgcggcagtcctgtggcatggtcatagccaccatgaacaagatggccaccgcc
atgcaggagggagaatacgactcggagaggcctcagaacaagaatcctcctcctgtggat
ctgcgggcggccgctcttcgggctgagatcaccgacgctgaaggtctcggcatgaagctg
gaggacagagagacggtcatcaaagagctgaagaagtctctgaagatcaagggtgaggag
ctgagcgaggccagcgtgcggctcagtctgctggagaagaagctcgacagttcgtccaaa
gacgcagacgagcgcgttgaaaagattcagactcgactggacgaggcccagacgctgctg
aagaagaaagagaaggagttcgaggagacgatggacgctctgcaggccgacatcgaccag
ctggaggcagagaaggcggagctaaagcagagaatcggcagccaatcaaaggtcggcccc
gacgggctgagaggagcctcgccctcagggatcgcttccatcgtcagcggaggggccgga
gcgaacatgatgtcggccgtcggctcggcttcaggtctgcaggtggtcgactccccgctg
ctgagtcagcagatcgacgctcagagactctgcatcaaacacctgaagaacgaaaacaac
aggctgaaggcggagaagatgcgcgcccagctggcctctctgccccccctccacgttacc
aaactcccctgtggagagggaggtcgccctgaggttctctccagcgcactgtaccgcaaa
acagaccagctgctggagactctgctgcagatgagcgccaacgtgaaggtggtggacatc
accgggaagtctccagtgacacctggtgctcagctgctggaacaaacggctagattacaa
tcactgagcgacactctgggcagactgaaggatgaagtagcagagcacgtcgtccaccag
cagcctggagctcgggtctcgtctgatttcgcgacgttcccctcaactttgtttgtaaaa
gcgaaggaggagcggcagggcgacacggtgctggtgggccgggtcatggtgccgtgttcc
cgcggtcaggagcaggtgcaccgcctcgtcctgtcgcagactcagctgcatcgagttcac
agtctgctgcgcacctga
DBGET
integrated database retrieval system
