Pseudochaenichthys georgianus (South Georgia icefish): 117467517
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Entry
117467517 CDS
T09629
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pgeo04091
]
117467517 (atrn)
Lectins [BR:
pgeo04091
]
C-Type lectins
Others
117467517 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_3
Kelch_1
EGF_LMN_ATRN
Kelch_5
CUB
PSI
Kelch_6
Kelch_4
EGF_TEN
Kelch_2
NANM
EGF_Teneurin
EGF_2
PSI_integrin
EGF_laminin
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
117467517
NCBI-ProteinID:
XP_033967059
LinkDB
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Position
22:complement(5971056..6125003)
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AA seq
1372 aa
AA seq
DB search
MYGATRRACSGRTLLMLTTALLLSVTGLLSGLPSSTEAKECDKPCMNGQCNTATGKCMCF
PGWVGDQCQHCGGRFRLTGPSGHLSDGPGNYKYKTKCTWLIEGQPNTILRLRFNHFATEC
SWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAAYNLTGF
NISYRVNSCPNNCSGRGECLVNNSTGAVYCDCEDNWKGAACDVPYCLADCGFPERGQCQG
KVCVCNTGWQGPNCLVSVPANSSFYTREEYTDPGLAKASHKAVVDQGIMWVIGGYVFNAS
DYHVVKAYNLSSKSWLTLDPSVNTVTPRYGHSLALHEGRIYMYGGKIDSTGNVSSQLWVF
HIQNQTWVLLSPRAKDQYPVVGHSAHIVPPLQEEDSPIMLVLFGHCPLYGYINQVQEYNI
VRNTWSMVATEGALVQGGYGHSSAFDPSSRAIYIHGGYKAFSANKYGLAGDLYKFEVDKM
KWTILRDSGFFRYLHTAVMVSGTMLVFGGNTHNDTSMSHGAKCFSSEFLSYSLACDEWTV
LPRPDLFQDVNRFGHSAVISDSVMYVFGGFNSLLLSDVLMYTSPSCAAFSSPASCSQAWP
GIQCVWNSTQESCLPWESSAIGGEQQQQLPASCNTRSYADSEKCDQYTDCYSCTANTNGC
QWCSGQCLSLGSNCTSATVAIAEFEVCPKDNPSSVCNKKTSCKSCAVDQNCQWEPRNQEC
ISLPGNENVCGESWHLVGNSCVKIITAKDSYDNAKLACRSHNAVLASLTTQKKVDFVLKE
LQIMSVVYKASLTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDAGFCGYLAEPAS
SGLKAQTCINPVNGSLCERPANHSAKQCRTPCAMRAMCSECTSGSSECMWCSNMKQCVDS
NAYVASFPFGQCMEWFTMNTCPPENCSGYRTCGQCLDQPGCGWCTDHNNTGRGQCIEGSY
RGPFLTAVPAPSTLPGLPASPQPALNASMCPNEAKYNWSFIHCPACQCNGHSQCVNESVC
EKCEDLTTGRHCESCISGFYGDPTNGGNCQPCKCNGHASMCNPNNGKCFCTTKGIKGDRC
HLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDLDMFI
NASKNFNLNITWATSFSAGTQTGEEIPIVSRSNIKEFKDSFSNENFDFRNNPNITFFVYV
SNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLL
REMQQMASRPFATINVALETDEEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVRLPR
GTGGIPPPGQSGLAVASALVDVSQQMCVGFKEKSGGLRNRKQQPTAQPSTCI
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgacgcggcgggcctgctcgggccggactctgctgatgctgacaaccgct
ctcctgctctccgttaccgggctgctgtccgggctgcccagctccaccgaggcgaaggaa
tgcgacaaaccgtgcatgaacgggcagtgcaacaccgctactggaaaatgtatgtgcttc
cccggctgggtaggggaccaatgccaacactgcggagggagattcaggttgacggggccc
tctggtcatctgagtgacggtccagggaactacaagtacaagaccaagtgcacctggctg
atcgagggacagcccaacaccatactccgattacggtttaaccactttgccactgaatgc
agctgggaccacctgtacgtgtacgacggagactcaatctacgcccccctcctcgccgcc
ttcagtggtctgatcgtgcctgagcgttacgggaacgagacagtccctgaggtggtgtct
cagtccggctatgccctgctgcacttcttcagtgacgctgcctacaacctgaccggcttc
aacatttcctacagggtgaattcatgtcccaacaactgctccggccgcggcgagtgtctg
gtgaacaactctacgggcgcggtgtactgtgactgtgaagacaactggaagggggctgcc
tgtgacgtcccgtactgcctggcagactgtggcttccccgagagaggtcaatgccaggga
aaggtgtgcgtctgcaacaccggatggcaaggtccaaactgtttggtctcggtaccggcc
aactcctccttctacacccgggaggagtacaccgaccccgggctggccaaggcttcccac
aaggccgtggtggaccagggcatcatgtgggtcatcggaggctacgtcttcaacgcctcc
gactatcacgtggtcaaagcgtataacctcagtagcaagagctggctgaccctggacccc
tccgtcaacactgtgacgccgcgatacggccactctctggctctccatgaggggaggatc
tacatgtacggaggaaagatcgactccacaggaaacgtgtccagccagctgtgggttttc
cacatccagaaccagacctgggtcctgctgagcccgcgggccaaggatcagtaccccgtg
gtaggacactcggcccacatcgtgcctcccctccaggaggaggacagtcccatcatgctg
gtcctgttcggacactgtcctctgtacggatacatcaaccaggtgcaggagtacaacatt
gtgaggaacacatggagcatggtggcgacggagggggccctggtgcagggggggtacggc
cacagcagcgcgttcgaccccagctccagagccatctacatccacggaggctacaaggcc
ttcagcgccaacaagtacgggctcgctggagacctgtacaagttcgaggtggacaagatg
aaatggaccattctgagagacagcggcttcttccgctacctgcacacagcggtgatggtg
agcgggaccatgctggtgtttggaggaaacacacacaacgacacatccatgagccacgga
gccaagtgcttctcctccgaattcctgtcctacagtctggcgtgtgatgagtggacagtg
ctgcctcgaccggacctcttccaggacgtcaatcgcttcggacactcggccgtcatcagt
gacagcgtgatgtacgtcttcggaggcttcaacagcctgctgctcagtgacgtcctcatg
tacacgtcgcccagctgcgccgccttctccagcccggcgtcctgcagccaggcctggccc
gggatccagtgtgtgtggaacagcacccaggagagctgcctgccctgggagagcagcgct
atcggaggggagcagcagcagcagctcccggcctcctgtaacacacgatcatatgcagac
agtgagaagtgtgaccagtacacagactgctacagctgcaccgccaacaccaacggctgc
cagtggtgctccggacagtgcctgtctctggggagcaactgcacctccgccacggtggcc
atagcagagtttgaagtttgtcccaaagacaacccgtcatcggtgtgcaacaagaaaacc
agctgtaagagctgcgcagtggaccagaactgtcagtgggagccccgcaaccaggagtgc
atctcactgccaggtaacgaaaacgtgtgtggtgagagctggcaccttgttggaaactcc
tgtgtgaagatcatcacggcgaaggactcgtacgacaatgccaagctggcctgccggagc
cacaacgccgtgctcgcctcgctcaccacgcagaagaaggtggactttgtgctgaaggag
ctgcagatcatgagcgtggtgtacaaggcctctttgacgccatgggtggggctcaggaag
atcaacgtgtcgtactggtgctgggaggacatgtctcccttcaccaacacctcgctgcag
tggctgcccggagagcccagcgacgccggattctgtggatatctggccgagccggcgtcc
agcggactgaaggctcagacctgcatcaacccggtgaacggcagcctgtgtgaacgacca
gccaaccacagtgccaagcagtgccggaccccgtgtgccatgagggccatgtgcagcgag
tgcaccagcggcagctccgagtgcatgtggtgcagcaacatgaagcagtgcgtcgactcc
aacgcgtacgtggcctccttccccttcggacagtgcatggagtggttcaccatgaacacc
tgcccaccggagaactgctcggggtaccggacctgcggtcagtgtctggaccagccgggc
tgcggttggtgcaccgaccacaacaacacgggcaggggtcagtgcatcgagggctcgtac
cgcgggcccttcctcaccgcggtgccggccccctccaccctgcccggcctgcccgccagc
ccccagcccgccctcaacgccagcatgtgccccaacgaggccaaatacaactggtccttc
atccactgcccagcctgtcagtgtaacggtcacagccagtgtgtcaacgagagcgtgtgt
gagaagtgtgaggacctgacaaccggccggcactgcgagagctgcatctccggcttctac
ggagaccccaccaacgggggcaactgccagccctgtaagtgcaacggccatgccagcatg
tgcaaccccaacaacgggaagtgcttctgcaccaccaagggcatcaaaggagatcgctgc
cacctgtgtgaggttgagaatcgttaccaaggcaaccccctcaaaggaacatgttactac
acgctgctcatcgactaccagttcaccttcagcctgtcgcaggaggacgaccgctactac
accgccatcaacttcgtggccacacctgaggagccaaaccgggatctagacatgttcata
aacgcctccaagaatttcaacctgaacatcacctgggccacaagcttcagtgcgggcacc
cagaccggggaggagatccccatcgtgtcccggagcaacatcaaggagttcaaagacagc
ttctccaacgagaacttcgacttccgcaacaaccctaacataaccttctttgtctatgtc
agcaacttcacctggcccattaagattcaaatcgccttctcgcagcacagtaacttcatg
gatctggtgcagttcttcgtcacgttcttcagctgcttcctgtcgctgctcctcgtggcc
gctgtggtttggaagatcaaacagagctgctgggcgtcacggcgacgagagcaattgctg
agggagatgcaacagatggctagccggcctttcgccaccatcaacgttgccttggagaca
gacgaggagccacctgacctgataggaggaaacgtcaagtccgtcccaaagcccatcgcc
ctcgagccttgctttggaaacaaagctgctgtgctctccatctttgtgcggttacccaga
ggcaccggcggcatccctcctccaggacagtctggtctggcggtggcgagtgcgctggtg
gacgtctctcagcagatgtgtgtgggcttcaaggagaagtctggaggtctgaggaaccgc
aagcagcagcccaccgcccagccctccacctgcatctga
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