Pseudochaenichthys georgianus (South Georgia icefish): 117467527
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Entry
117467527 CDS
T09629
Symbol
rab11fip5a
Name
(RefSeq) serine-rich adhesin for platelets isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117467527 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117467527 (rab11fip5a)
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117467527 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
117467527
NCBI-ProteinID:
XP_033967079
LinkDB
All DBs
Position
22:5416117..5445943
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AA seq
1787 aa
AA seq
DB search
MSSLTVEEDQKWLPTQVQVTVLRSRGLRGKGKHGTSDVYTIIQLGKEKYSTGVVEKTTEP
EWREECSFELQPGVLQGGGRNGGCPAGATELVLIVMHRAHMGMDVFLGQVVIQLDKVFHE
SRCVKNEWYKLNSKSGKKEKERGEIQATVQFTRNNLTASMYDLVMTDKSASTFGKLKERI
KGKRRSSEEDSSSAVLPSGYGSLHRMRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRG
KLRKSSDTRSSTSLGSESSESSRGGSLSPTAGISMVVSDLSNSPSNSSNLSPDNSPEHTA
NSLQCEYGDDPGEISIIVPPLPTAWVNGGDAYSDLPLDKGSVNPVDSLGLPPLQKSLPLS
VSLQNLKPASAAPKSPMGDGRRWSFDKPDEEEKAAIAAALEKSGPMLGDEEEEEEEEEEG
LGYAAQIKSSSSTVESGKKQRRNFFSHGRGESAGKGQSRGKDESEQAPAAEEKHKGWFGS
KDSNSKPSLVVSPKLEPSTDPHPLPLPLSHPPGPPVDPLVSLHHTNPFSQSTSPPMSPCN
PFLSFIQQNLFYDTMLNAEPLKPSLPTLPYLSSARPPIAQLFPQASNPYPTLNDENPTAE
DSGIGTKSDAKKRPLPPPPTYEDKPLNVKSSGHFMSAGALEPEWDESFEAFAAGRLQSPE
DMTADCKTQQNTPSEHSLEHCNEKAALQPITDQNTNVNDALHTQPCTEFVFDAQKSNAYH
LDTFAHYLETIPEHTSFENDNDTLNTSTNSPTPDAFTDPHHTNAATNTNDVTDTNVHPSP
GHASPAKLSSSSPDPTSSGLGSSAEEDFLSCVSSYSDKLAETQNFESSILGFEKSSDSSV
VRKPSESEDDFTDRSIDLDLGNVSQHVMKHGDGDEKTDLEGILAAPMSTVLTNQQSATEI
RSESPIFSYFSPELQPKSYISLQPDNEKGKKGIDKEEAEKRNFESSTFGSFKEDESVATN
HSESEVDITDQSICLSLEDEAQHNVIQHSDGGENADLDGSLVPTSLKVTHQQPVGETGSK
GADTQSPNLSYFSPELQPISKIYLQPENENGKEGINKKEEAEKLNFERSIVGFCEEEESV
EGKPSESEVHITNRSNDQSLAQHYVTQHRDGGEKADVHGIQGSLGPMSPVLTHRQPAGEA
GSEDAADLLPELHAKPNIFVQSVKENGNKGNSSATDFVSGVSPFSGKFPAFSLEEAEEQN
FESSVLRFSKEESVVKKPPKSEEDTTDRSNDLSLVDLAKHNVIQHGDTDEKADLDGIEGS
LAPLSPVISHQQPAGDTGSEDASSFSNLLTELHTKSDISLQPDNEKGKDIGEMNTSVEDF
SKLLNDSSISEINTTDVTTPDDKLYSTQQSLRIITSSPNVRHGSSDSPIESTGLGGQDAS
QRSGVPFGLFDDFLNTSPSQDFDDTMLHTPASDQSTSSFLQSLYVSTNSQDYQTCVSQPS
SSGSEKNETLHSANSTLCGDLIEIQTTPEAALDQKDSRSHPFHEEFDNIGGSFFGAKDTT
PTLKPSFTIADNFGLLSAASTDLYKSYNPWNLDDEAVQYQHVVLGDMFSKSSQAQSTTLP
RSHSEGTLTPAFEDLLQPFYGSDPGAIQASSSAPPLSPDLPSLTSFAPSLTPSSSSSFSL
PFLYNATARSPPSTAMLEEMHRQQQAANQQNSPHPVKPLTTTTSEKRTEGRSVLATGLEK
LKSSISPGRSSQLSEQETSKKKPVSEGAGSYFHLNHSELVALLVQREAELEHQEDEFKRQ
KRLLAKREVELKKLKPQVKDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtggaggaggaccagaaatggttaccgacacaggtccaggtgacg
gtgctgagaagcaggggcttacggggcaagggcaagcatggcaccagcgatgtgtacacc
atcatccagctggggaaggagaaatactcgaccggcgtggtggagaagaccacggagccc
gagtggagggaggagtgctcgtttgagctgcagcccggcgtgctgcagggcggcgggcgg
aacggaggctgtccggccggtgcaaccgagctggtgctcatcgtgatgcaccgggcacat
atggggatggacgtgttcctgggacaggttgtgatccagctggataaggtcttccatgag
agtagatgcgtgaaaaacgagtggtacaagttaaactccaagtcggggaagaaggagaag
gagcgaggagaaatccaagccaccgtgcagttcaccagaaacaacctgacggccagcatg
tacgacctggtcatgacggacaagagcgcctccaccttcggaaagctgaaggagcgcatc
aaggggaagaggagatccagtgaggaggactcttcctcagccgtgctgccgagtggatac
ggctccctgcaccggatgaggcagcgactcccgagcgacggaggcggggaggaagactac
gaggacgacgagggaggggaggcccggcgcagcaagatgaggaccttcttcctgaggggg
aagctgaggaagtcctcggacactcgctccagcacgtcgctgggctcagagagcagcgag
tcgtcccgggggggcagtctgagccccaccgccggcatcagcatggtggtgtccgacctc
tccaactcccctagcaacagcagcaacctgtcccctgacaacagcccagagcacacggca
aactctctccagtgtgagtatggagacgatcccggggagatctccatcatcgtgcctcct
cttccgaccgcgtgggtcaacggaggcgacgcttacagtgacctgcccctggacaaaggc
tcagtaaaccctgtggattctctaggcctgccgccgctgcagaagtctttgcctctctcc
gtgtctttgcagaacctcaagcctgcctcggccgccccaaagagccccatgggagatggg
cggcgctggtcctttgacaagcccgacgaggaagagaaggcagccatagcggcggcgttg
gagaaaagcggccccatgctgggtgacgaggaggaggaggaggaggaggaagaggaggga
ttgggatatgctgctcaaatcaaatcctcctcctccacggtggagtccgggaaaaagcag
aggaggaactttttctcccacgggagaggggagtctgcggggaaagggcagagtcggggc
aaggatgagtctgaacaggcccccgccgccgaggagaaacacaagggatggtttggatca
aaggactcgaacagcaaacccagcctggtggtgtcccctaaactagagcccagcactgac
ccccacccccttccactcccactcagtcaccccccgggtccccctgtcgatcctctggtt
tccctgcatcacactaaccccttctcacagagcacctcacctcccatgtccccctgcaac
cctttcttatctttcatccagcaaaaccttttctatgacaccatgcttaacgctgagccc
ctaaaaccttcgctgcctactctgccttatctctccagcgcccggcctcccatagctcag
ctctttccgcaggcgagtaacccttaccccaccctcaacgacgaaaacccaaccgcagag
gactccggcattggtacaaagagcgacgctaagaaacgacctcttcctccacctcccaca
tacgaagataaacctttaaacgtgaagtcgtccggccattttatgtctgccggggcgctg
gaacctgaatgggacgaatcctttgaagcgtttgctgctggcaggctgcagtctcccgag
gatatgaccgcagactgcaaaacacagcaaaacacacccagtgagcattcactggaacac
tgcaatgaaaaagcagcattacaacccataacggatcaaaacactaacgtgaatgatgca
ctacatactcaaccttgcacagaatttgtatttgatgcacagaaatccaacgcatatcat
cttgacacatttgcacattacctcgagacaatcccagagcacaccagctttgagaatgac
aatgacactttgaatacttccactaactcgccaacaccagatgctttcactgaccctcat
catactaacgctgctactaatacaaatgatgttactgacactaacgtgcatcccagcccc
gggcatgcctcgcctgcgaagctcagcagcagctccccagatccgacttcttcaggcctg
ggcagttctgcagaagaggatttcctctcgtgtgtatcttcttattcagacaaattagca
gagacacagaactttgaaagcagcatcctcggctttgagaaatcctccgattcatctgtt
gtaaggaagccctctgaatcagaagatgactttactgacaggtccattgatctggattta
ggcaatgtgtctcaacatgttatgaagcatggggatggtgatgaaaagacagatttagaa
ggcatattagcagcaccaatgtcaacagtgcttacaaatcagcagtcagcaacagagata
agaagtgagtcaccaatcttttcatacttttcaccagaactacagccaaaatcctacatt
tcgttacagcccgacaatgaaaagggaaagaaaggcatcgacaaggaggaagccgagaaa
cggaactttgaaagcagtaccttcggctcttttaaagaagacgaatctgttgcaacgaat
cactcagaatcagaagttgacattactgaccagtccatctgtctttctttagaggatgaa
gcccagcacaatgttattcagcacagcgatggtggtgaaaatgcagatttagacggctca
ttggtaccaacgtccctaaaggtaacacatcagcagcctgtgggagagacaggaagtaag
ggtgcagatacacagtcaccaaacctttcgtacttttcaccagaactgcagccaatatcc
aaaatatacttgcagcctgaaaatgaaaatggaaaggaaggcatcaacaagaaggaggaa
gccgagaaactgaactttgaaagaagcatcgtcggtttttgtgaagaagaagaatctgtt
gaagggaagccgtcagaatcagaagttcacattactaacagatccaatgatcagtcatta
gcccagcactatgttactcagcacagagatggtggtgaaaaggcagatgtacacggtata
cagggctcattgggaccaatgtcaccagtgcttacacatcggcagcctgcaggagaggca
ggaagtgaggatgcagcagacttgttaccagaactacacgcaaaacccaacatatttgta
cagtctgtcaaggaaaatggaaataaaggcaacagctctgcaacggattttgtgtcaggt
gtctctcctttttcaggcaaattccctgcattctccttggaggaagccgaagaacagaac
tttgagagcagcgtcctccgatttagtaaagaagaatctgttgtaaagaagccgccaaaa
tcagaagaagacactactgaccggtccaatgatctgtctttagttgatttagctaagcac
aatgttattcagcacggggacactgatgaaaaggctgatttagacggtatcgagggctca
ttggcaccgctgtccccagtgatatcacatcagcagcctgcaggagatacggggagtgag
gatgcttcaagcttttcaaacttgttaacagaactacacacaaaatccgacatctcttta
cagcctgacaatgaaaaaggaaaagacattggtgaaatgaacacatctgtagaggatttt
tctaaattgttaaatgattcctcaatatctgaaataaacactacggatgtgacgactcca
gatgataaactgtactccacacagcaatcactacgcatcataacctcctcccccaatgtg
aggcacggttcatctgactcccccattgagagcactggtttaggagggcaggatgcaagc
cagcgttcaggtgtaccatttgggctttttgacgacttcctcaacaccagtcccagccaa
gactttgacgacaccatgttgcacactcctgcgtctgatcaaagcaccagcagcttcctc
caaagcctttatgtcagcaccaactcgcaggattaccaaacctgtgtgtctcaaccctcc
tccagcggctcagagaaaaacgagacgctgcactctgcaaactcaacgctgtgtggcgat
ctgattgagattcagacaacccctgaagctgctttggaccaaaaagactccagaagccat
ccatttcacgaggaattcgacaatattggaggctctttctttggagccaaggacactaca
ccaactcttaaaccaagcttcacgatagcggataacttcggtttactttctgcagcatca
acagacctttacaagagctataatccatggaatctcgatgacgaagctgtgcaatatcaa
catgtcgtcttgggtgacatgttctcgaaatcctctcaggcacaaagtactacactaccc
cgctcacactctgaaggcacactgacacctgcctttgaagacctcctgcagcccttctat
gggagcgatcccggtgcaatacaggcgtcctcctcggctcctcctctgagccctgacctc
ccctctctgacctcctttgctccctctctaactccttcaagtagtagctccttttccctc
ccttttctttacaacgctacggcgagatcaccacccagcacggcaatgcttgaggagatg
caccggcagcagcaggcagccaatcagcagaacagcccccacccagtgaagcccctcacc
accaccacgtcagagaagcggacggagggccgctccgtgctggccaccggcctcgagaag
ctcaagtcctccatcagcccggggaggagcagccagctgagcgagcaggagaccagcaag
aagaagcctgtgtcggagggggcgggctcgtacttccacctgaaccacagcgagctggtc
gccctgctggtgcagcgggaggccgagctggagcaccaggaggacgagtttaaacgccag
aaacgcctgctggcgaagcgcgaggtggagctgaagaagttgaagccgcaggtcaaagat
ctggaagactacatagacacgctgctggtgcgcatcatggagcagaagcccacactcctg
caagtgcgctccaagctaaagtga
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