Pseudochaenichthys georgianus (South Georgia icefish): 117467618
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Entry
117467618 CDS
T09629
Name
(RefSeq) synaptosomal-associated protein 23-like
KO
K08508
synaptosomal-associated protein 23
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117467618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117467618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117467618
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
117467618
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117467618
Exosomal proteins of other body fluids (saliva and urine)
117467618
Exosomal proteins of colorectal cancer cells
117467618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
COG6_N
Sas-6_C_CC
Sec3_CC
RmuC
V-SNARE_C
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
117467618
NCBI-ProteinID:
XP_033967252
LinkDB
All DBs
Position
22:3960392..3967104
Genome browser
AA seq
188 aa
AA seq
DB search
MLQMAEESRQTGTNTIVMLDQQGEQLRRVDEGMDQINQDMRQAEKNLTDLSKCCGMCVCP
CDRVSSIEKDSKYKRTWGHREPDNENDSNGGKVVSRQPSGVRNGQVQTNASAPSGPYIKR
ITNDAREDEMEENLDAVGSIIGNLKNMAQDMGNEIDSQNKHIDGINDKADMNKFRIDEAN
QRANKLIK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatggcggaggagagcagacagaccggcaccaacaccatcgtcatgttggac
cagcaaggagagcagctgaggcgtgtggacgagggcatggaccaaatcaaccaggacatg
aggcaggcggagaaaaacctgaccgacctctccaagtgctgcggcatgtgcgtgtgtccc
tgcgacagggtgtcgtctatcgagaaggactcaaagtacaagcgcacatggggtcatcga
gaacccgacaacgagaatgactccaacggaggaaaagtggtctccaggcagccgtcgggc
gtccgcaacgggcaggtccagaccaacgcctcggccccctcaggaccctacatcaagagg
ataaccaatgatgctcgtgaggatgagatggaagagaatctggatgcggtcggcagcatc
attggcaacctgaaaaacatggctcaggacatgggcaacgagatagatagtcagaacaaa
cacatcgacggcatcaacgacaaggcggacatgaacaagtttcgtatcgatgaagcaaac
cagagagccaacaagctcatcaagtag
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integrated database retrieval system
