Pseudochaenichthys georgianus (South Georgia icefish): 117467641
Help
Entry
117467641 CDS
T09629
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117467641 (srrm1)
03015 mRNA surveillance pathway
117467641 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117467641 (srrm1)
03041 Spliceosome [BR:
pgeo03041
]
117467641 (srrm1)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117467641 (srrm1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117467641 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117467641
NCBI-ProteinID:
XP_033967293
LinkDB
All DBs
Position
22:20972499..20983981
Genome browser
AA seq
864 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTETL
GFEDDVVIELIFNLLEEKNPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLAIQKKVDDDKKEKDIRDRAQSKSPRSLHRPMSRRKSRSP
SPRRRSPVKRERKRSASRSPRRKPSPVTSSSPPPPLMQLPAKPVEQLVEPNALEGALPEP
AIQETPSTCDTVVEVVKPDPVTEVKESSPEKPLKKEERPKSRDREKDSRRDRPHHRSRSH
SRNRRRRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPPGNRNRHRRSPVRRRRSRSASSS
GSSSSNSRSPKKAMKRISNSPPRKGVHHPEKAISPAGKDRRSPSPRARRGRGSASPARPS
GLKQKQRGRNDSPSDNAKPRPSEGSDSEEDKNDKEATADSVQQRRQYRRQNRQTSSDSGS
SSSENEGPKKPTAGPGAKNGDVRRRRSRTPSPRRRHRDASPRKRRSPSPPRRRRSPSPPR
RRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPPKRSSPGAK
RRPSRSPKRRNSPPQRRRMSPSSSPPRHRRSPMLPSARLSRDPRSPVAAAGRLSPSPATR
GRPVRCSTSPQGRFENSSASPSNPRRQQSPTHSGKPIRRVSRTPEPRNNKRPSPSPQPMR
RAASRSVSPQPAALKRPVPASASPSPSRSASGSPPPAKKASSGSGSQSPSKNSDVDGSGK
KKKKKKEKKHKKEKKHKKHKKHKKEKSSSAVTGDAHENHGAEDGESRKESDSEVEDSLAD
LEKHLREKALRSMRKAQLSPSQMS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggataactcagcgagtgacagaaactctg
ggattcgaggatgatgtcgtcatagagttaatatttaacctgcttgaggagaagaatcca
gatagcaagatgatgcagatcaacctgacaggctttctgaatgggaagaacgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgctcaggagaacattgctggcatcccc
tctgctttcctggaacagaagaaggaggaaattaaacagagacagattgaacaagagaag
ctagctattcagaagaaagtcgatgatgataagaaggaaaaggacatcagagacagggct
cagtcaaaaagcccaagaagtttgcatcgtcctatgtctaggaggaaatcaaggtcaccg
tcaccaaggcgaaggtcgccagtgaagcgtgaaagaaaacgcagtgcctctcgctcgccg
agacgcaaacccagtccagtcaccagcagctccccccctccacccctgatgcagctgcca
gccaaacctgtggagcagcttgtggagccgaatgcattagaaggagccctgccagagccg
gccatccaagaaactccttccacatgtgacacagtggtggaggtggtaaaaccagaccca
gttactgaagtcaaagaatcttcgccagagaagcctctcaagaaagaggaaaggcccaag
tcccgggacagggagaaagacagcaggagggacagacctcaccaccgctctcgttctcat
tcccgcaaccgcaggcgacgctcccgctctagatcctactctcctcgtagaagaccaagt
cccaggaggagaatgtctcctcgtcgtaggagcccccccaggcgtggcccccctggcaac
agaaacagacatagacggtccccagtccgcaggaggcgctcacgctctgcttcatcttct
ggcagcagctcctccaactctcgctctcctaaaaaagcaatgaagagaatatccaactcc
ccacccagaaagggggtccatcatcctgaaaaagccatcagccccgccgggaaggacaga
cggtcaccatctcctcgggccagaagaggccgaggctctgcgtcaccagccaggccgtct
ggtttaaagcaaaaacaaaggggaaggaatgattctccgtctgataatgccaagcccaga
ccttctgaaggctctgactcagaggaggataaaaatgacaaagaggcaacagcagattcg
gtgcagcagcgacgtcagtatcgcaggcagaaccgacagacatcttcagattcaggatct
tcttcctctgaaaacgaggggcccaagaagccgacagcagggccgggagccaaaaacggg
gatgtgaggaggagacgcagccgaacaccgtcaccacggaggagacacagagatgcctcc
ccaaggaaaagacgctctccatctcctccacgcagacggcgctccccgtctcccccacga
cgtcgcagatctccttctcctcctagacgaaggtccccttccccgcctccccgtcgtcgt
tctccatcccccagacgatattctccccctatccagcgtcgctacagcccctcacctttg
cccccacagaagaggaaaatgtctagctctcccccaaagcgctcttctccaggggccaag
cgacgcccctccaggtcccccaagcgcagaaactcccctcctcaaaggagacgcatgtct
ccatcctcatctccacccagacacaggaggagccccatgttgccttctgctagactaagc
agggacccacgatcccctgtggcagcagctggccgcctctccccatcccccgcaacccgc
ggtcgccctgttcggtgttccaccagtcctcagggacgttttgaaaactccagtgcatct
ccatctaacccgcggaggcagcagtccccgacacacagcggcaaacccatccgccgagtg
tcccgcaccccagagccacgcaacaacaagagaccctctccgagcccccagcccatgagg
agagcagcctccagatctgtttcccctcaaccagcagctctgaaacgtcccgtccctgca
tctgcctccccctcaccctcccgctctgccagtgggtctccaccaccagcaaagaaagcc
agcagtggttccggcagccaatccccaagcaagaattccgatgttgatggcagtggaaag
aagaagaaaaagaagaaggaaaagaaacacaagaaagagaagaaacacaagaagcacaag
aagcataagaaggagaagagtagtagtgctgtgaccggtgatgcacatgaaaaccacggc
gcggaggacggagagtcaagaaaggaatcagatagtgaagtagaggacagcttggccgac
ctggagaagcacctaagagagaaagccctacgatccatgaggaaggcccagctgtctcca
tcccagatgtcctga
DBGET
integrated database retrieval system
