Pseudochaenichthys georgianus (South Georgia icefish): 117467679
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Entry
117467679 CDS
T09629
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117467679
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117467679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
117467679
NCBI-ProteinID:
XP_033967375
LinkDB
All DBs
Position
22:16878829..16966462
Genome browser
AA seq
2069 aa
AA seq
DB search
MLKMDRAGFVVLMLLIVALVQISDSHKDTTGGRKEGAGAAQAVSNKQQSRVRSQGHSPRE
PEDDASPEPSSETSPGTSRSMTLVRLPRGTSPHGDDRNTSKAGPAHAAGVSREDPVSAPR
DGALSTARHPGSPLHRSGVNRRQSSKTGSASTRRLIGPNVCGGQQCCSGWALAPGTNRCI
KPDCQPPCQNRGSCSRPQTCVCRSGFQGPRCEEVAPEQVYIRDGGALRRIQPGTNPFQRD
QPRRRPSERQAIDTTKVQPPRPATTRLPVTQVRRGPPDSSPQQTGTSRTVKRYPSSSGPI
TSNALPNGNGYAHGHGSVHRNRHGHRNGPSNGHHNTNRPTSNSQMQGQFNNALSPAGANL
TSNLDRIKIVFTPMVCRRVCSGGRCYNSCEKGDMTTVYSENQNHQQQQQQRQQPKNPGYR
LFFCQIPCLNGGRCIGRDMCWCPSNSTGKFCHLPVPPPARPIPNKEASHHGPKTPSRSMY
TLPLSNQQVSLHPSLVNVHIQHPADSEVHIHQVARVQPGQRPALSDGAHSVQQRSQPGNG
HEHTSEHNSRHPQTSGNGHGHARQHSNQNGPVGRCFQETVDGQCGKPLPGLTKQDDCCGS
VGTSWGLNMCQKCPAKPASAVIRNGQVECSKGFKQMNLTHCQDVNECLLPGLCKNAECLN
TKGSFRCICKPGFFLDPDRSHCVSDKAVSDQKAFCYRSVSAGSCSLPMVHHITKQICCCS
RVGKAWGPGCDRCPLPGSDHFKEICPAGHGYTYSLSDVQIAVTRLGEDDLQSTGVSWEEE
GPTFSLPQVPLYPENPETPQAPRDPETPQHPLHPSHPDRETPKEREDTEIPSPPAIVTDS
PLKNPETSPDSSIINQRPDSGDTTPTVSATGIDKCATTPTICGRGECIPVQTGYTCRCES
GFNLSALQTNCIDVNECDEEPCEGKGRCINSYGSYACYCHSGYSQVITQNRKFCQDINEC
SMPNKCQNGDCVNTEGSYTCECNSGYAQSWRGQCEDMDECRDPSSCPNGVCVNTLGSFEC
QDCGPGFRPVNERCVDVNECLNQTACSHGRCVNIEGSYRCNCFQGYTLSPDNICQDEDEC
ALPGVCLSGRCVNLDGTYKCTCNHGYQVTSDGAACEDVNECATGNVCPAGICINTAGSYT
CQDCRPGFGPSADGLRCEDVNECTQGDLCLDGVCANTEGSYTCTRCKAGYRVSQDRQRCE
DVDECQPLSPCANGICLNSEGSYTCENCPTGYRVSYDGEICQDINECALPTTCPQGTCTN
TDGSFTCIVCQPGFRVSEDGQQCDDVDECLVSDVCHGQLCLNTPGSYSCRGCGAGLQLSE
DGYGCEDIDECETPGVCPAGVCTNTEGSFSCMACDPGFTVAPNGLSCEDVNECEDQSLCV
EGQCTNTIGSYSCFCPDGLEMVDGTSCRDINECLTVMGICGEGDCVNTKGSYTCMCPDGF
TTVDGRIGCQDVNECEKDDACIRGECINTDGSFLCLCEAGFKFDTDTADCEDQNECKEFG
SSVCGTWRCENTIGSYRCFMGCQPGLQGDDASDCDIDECVNGTMCGNHGFCENTDGSFRC
QCDQGYKNPPGDMSKCVDVNECEMSLALCGEALCENVDGSFLCICPNDNEEFDPLTSQCR
SLANSTPAPGVPPSASSADERKECYYNLNDANFCDNVLSRNSTKQECCCTVGAGWGDNCE
IHACPLQGRDDFNQLCPHGTGLLPQPLSSSQNLGEHRPYIDANECEMFGSDICKNGQCLN
LFSTYTCYCRSGFYYDNIRLECVDYDECGFGTACENGACVNTAGSFNCFCSPPLVLDSTR
RRCIGLNTTEETIDSDHDVHMDICWQRLEGDNVCAKPLQDRRTTYTECCCLFGIAWSEQC
AFCPQKDSEDYAVMCNLPREGGRDSLRERPGYEYGMEGPEDPAEPFVPPYWDSYGGPSGP
YDIPEGVPLFNDNDYGVQQPPSRVPIARPREQQPRPLNPYAGRYDSFEGLRAEECGILNG
CENGRCVRVREGYTCDCFDGYELDLNKMACLDINECEDISDKVPLCQNGLCSNTEGSYKC
TCLSGYLASAEPHRCIPEIPASGLLETGN
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatggaccgcgcaggatttgttgttttgatgcttttgattgttgcgctggtg
caaattagtgacagtcacaaggacacaacaggtgggaggaaagagggtgcaggggcagcc
caggcggtgtcgaacaagcagcaatcccgggtgaggagtcaaggtcactcgccaagggaa
ccagaggacgatgcatccccggaaccatccagtgaaacttctcctgggaccagccggtca
atgactcttgtccgacttcccaggggcacatcaccccacggggatgacaggaacacatcc
aaagcaggaccggctcatgctgcaggcgtctcccgggaagaccccgtctctgcgccgcgg
gatggtgcgctgagcaccgccagacacccgggcagcccgctgcacaggagcggagtgaac
cggaggcagagcagcaagaccggctctgccagcacaaggagacttattgggcctaatgtc
tgtggaggtcagcagtgctgctcaggctgggctttggcaccaggaactaatcgctgcata
aaacctgactgccagcccccctgccagaaccgtggctcctgcagccggccacagacctgc
gtgtgtcgctcaggcttccaggggccccgctgtgaggaggtggctccagagcaggtgtac
atccgtgatggaggagccctgaggcgcattcaacccgggaccaaccctttccagagagac
caaccgcggagaaggccgtcagaaaggcaggccatcgataccacgaaggtccagccccca
cgacctgcgaccaccagactgcctgtgactcaagtgagacggggacctcctgactcctcc
cctcagcagactgggacctcccgcactgtgaaacgttatccatcatcttctgggccaata
acctccaacgctctacccaatggcaacggctacgctcatggccacggcagtgtgcacaga
aacaggcacggacacaggaatgggcctagcaacgggcaccacaacactaacaggcccacc
agcaacagccagatgcaagggcagttcaacaatgcactctcaccagcaggggccaacctc
acctccaacctggaccgcattaagatcgtattcacgcccatggtgtgccgcagggtgtgc
agcggcggacgatgctacaacagctgtgagaagggagacatgaccacggtctacagcgag
aaccagaaccaccagcagcagcagcagcagcggcagcagccaaagaacccgggctaccga
ctctttttctgtcagattccctgtctaaatggaggccgatgcattggcagggacatgtgc
tggtgtccatcaaactcaacggggaagttttgccacctgccagtcccacctcctgccaga
cccatccctaacaaggaagcaagccaccatggacccaaaactccctcccgctccatgtac
actttaccgctgtccaatcagcaagtgtccctccacccatccttggtgaacgtccacatt
cagcaccctgcagactccgaagtccatatccaccaagtagctcgggtgcagcctgggcag
agaccggccctcagcgatggggctcactctgtgcagcagcgctcccagcctgggaatgga
catgaacacaccagtgagcataacagcaggcatccacaaaccagtgggaatgggcatggc
cacgccagacagcatagcaatcagaatggaccagttggaagatgctttcaggaaacagtc
gatggacagtgtggcaagcctctgccaggccttaccaaacaggatgattgctgtggaagt
gtgggcacctcctggggtctcaacatgtgccaaaagtgtccagcaaaacctgcatctgca
gtgattagaaacggacaagtggaatgttccaaaggattcaaacagatgaatctcacacac
tgtcaagatgtcaatgagtgcctgctgcctgggctctgtaagaacgctgaatgtctcaac
accaagggaagcttcaggtgcatctgtaaaccaggcttctttttagaccccgacagaagc
cattgtgtctcggacaaggctgtgtctgaccagaaggcgttctgctaccggtccgtgtca
gcgggttcatgctctctgccgatggttcatcacatcaccaagcagatctgctgctgcagc
cgcgtgggcaaggcctggggccccgggtgtgaccgctgtcctctgccgggatcagaccat
ttcaaggagatctgcccagcgggtcacggatacacgtactcgctctctgatgtgcagatt
gctgtcacgcggctcggggaagatgacctgcagagcacgggagtgtcatgggaggaggag
ggccccactttctctctgcctcaagtacccttatacccggagaaccctgaaacgccacaa
gcaccccgggaccctgagactcctcagcatcctctccatccctctcacccagacagggag
acacctaaagagcgggaagatacggaaattccgagcccgccagccattgtgactgactca
ccgctgaaaaatccagagacttctccagactcctccatcatcaaccagaggccggattca
ggggacacgacccccacagtttcagccacaggcattgacaagtgtgccaccacccccacc
atatgtggccgcggggaatgtatccctgtgcagactggctacacctgccgctgtgagtcg
ggattcaatctcagcgcactgcagaccaactgcattgatgtgaatgagtgtgacgaggag
ccatgtgaagggaagggccgctgtattaacagctatggatcctatgcctgttactgccac
agtggctacagccaggtgatcactcagaacaggaagttctgtcaagacattaacgagtgc
agcatgcccaacaagtgccagaatggtgactgcgtcaacacagaaggatcttacacctgt
gaatgcaacagtggctacgcccagtcttggagaggccaatgcgaagatatggatgagtgc
agggaccccagctcctgtcccaacggggtctgcgtcaacactcttggctccttcgaatgc
caggactgcggccccgggttcaggcccgtcaatgagagatgtgtggatgtaaacgagtgc
ttgaaccaaacagcatgcagtcatggaaggtgtgtcaacatcgagggctcctataggtgc
aactgtttccagggatacacactctcaccggacaatatatgccaagatgaggatgagtgt
gcgcttcctggagtttgtctcagcggccgctgtgtcaatctggacggcacctacaaatgt
acctgtaaccatggttaccaagtcacctcagacggcgcagcctgcgaagatgtcaacgag
tgcgcaactggtaatgtgtgccctgcgggaatttgcatcaacactgcaggttcttacact
tgccaggactgcaggcctgggtttgggccatctgctgatggactgagatgtgaagacgtg
aatgagtgtacccagggtgacttgtgtcttgatggggtgtgtgccaacacggagggatcc
tacacctgtaccagatgtaaggctggctacagagtgtctcaagaccggcagaggtgtgaa
gatgttgacgagtgccagcccctgtctccctgtgccaatgggatctgtctgaactcggaa
ggctcttacacctgtgagaactgccccaccgggtacagggtatcatatgacggagagatc
tgtcaagatattaacgagtgcgcgctgccaaccacatgcccccagggaacatgtacgaac
acagatggttccttcacgtgtatcgtctgccaacctggattcagagtctctgaggatgga
caacagtgtgatgatgtggatgaatgcttggtgtctgacgtgtgccatggccagctgtgc
ttgaacaccccaggttcctactcctgcaggggctgcggagccggcctgcaactgtctgag
gatggttacggctgtgaagacattgatgagtgtgagaccccaggtgtgtgtcccgcgggt
gtgtgcaccaacacagagggctccttctcctgcatggcctgcgacccgggcttcactgtg
gctcctaacgggctctcatgtgaagatgtgaatgaatgtgaggaccaaagtctgtgtgta
gaaggccagtgtaccaacaccatcggttcctatagctgtttctgccccgatggtctggag
atggtggatgggacgtcctgcagagatatcaatgaatgtttaaccgtcatggggatctgt
ggtgaaggagactgtgtgaacactaagggctcctacacatgcatgtgccctgatggattc
accactgtcgatgggaggatcggctgccaagatgtgaatgaatgcgaaaaagacgatgcg
tgcatccggggcgaatgtatcaacactgacggctcgttcttgtgcttgtgtgaggctggc
tttaagtttgacaccgacacggctgactgcgaagaccagaatgagtgcaaggagtttggg
agctcagtgtgtggtacctggcgctgcgaaaacaccatcggctcctaccgctgtttcatg
ggctgccagcctggcctccagggagacgacgcgtcagactgtgatattgatgagtgtgtc
aatggaaccatgtgtgggaaccacggcttctgcgagaacacggatggctccttccgctgc
cagtgtgaccaaggctacaagaacccccccggagacatgagcaaatgtgtcgacgtgaac
gagtgtgagatgagcttggcgctgtgcggggaggccctgtgtgagaacgtcgatggcagc
ttcctgtgcatctgccccaacgacaatgaggaatttgatcccctcaccagccagtgccgc
tccctggctaactcgacgcctgctcctggcgtccctccatcagcttcctcagccgacgag
aggaaggagtgttactacaacttgaacgacgccaacttctgcgacaacgtcttgtctcgc
aacagcaccaagcaggagtgctgctgcacagtgggggccggctggggggacaactgtgag
atccacgcctgtcctctccaaggaagagatgattttaaccagttgtgccctcacggcact
ggattattaccccagcccttgtcctcttcacaaaacctgggagaacaccgcccttacata
gatgcaaatgagtgtgagatgtttggatcggacatttgtaagaacggacaatgtttaaat
ctattttccacctatacctgctattgtcgctccggattctactatgacaacatccggctt
gagtgcgtggattacgatgagtgtggatttgggaccgcctgtgagaacggagcgtgcgtg
aacacggccggctctttcaactgtttctgcagccctccgttagtcctggacagcacgagg
cggcgctgcatcggcctcaacaccacagaagaaaccattgactctgaccacgatgtgcac
atggatatttgctggcagcgtctggagggggacaacgtatgcgcaaagcccctgcaggac
cgcagaactacatacactgaatgctgctgcctgtttggcatcgcttggagtgaacagtgt
gccttctgtccccaaaaagactcggaggactacgcagtgatgtgcaacctgcctcgggaa
ggaggaagggacagtctgcgagagcggccagggtatgagtatggtatggaggggccggag
gatcctgcggagccttttgttcctccgtactgggacagttatggcggcccctcaggaccc
tatgacattccagagggagttcctctcttcaacgacaacgactacggcgtgcaacagcca
ccctcccgtgtgcccattgcaagaccacgggagcagcagccacggcctttgaacccctac
gctgggcgctacgattcctttgagggtctccgagcggaggagtgtggaatcctgaacggc
tgtgaaaatggccgctgtgttcgtgtgcgagaaggttacacctgcgactgctttgacggt
tacgaacttgacctcaacaagatggcctgtttagatataaacgagtgtgaggacatcagt
gacaaggtgcccttgtgtcagaacgggctgtgcagcaacacagagggctcgtacaagtgc
acctgtctgagcggctacttggcctctgcagagccgcacagatgcatcccagagatccca
gcgtctgggcttctggagacaggaaactga
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