Pseudochaenichthys georgianus (South Georgia icefish): 117467747
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Entry
117467747 CDS
T09629
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117467747 (elavl1a)
03041 Spliceosome [BR:
pgeo03041
]
117467747 (elavl1a)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117467747 (elavl1a)
mRNA cycle factors
Stress granule specific factors
117467747 (elavl1a)
Spliceosome [BR:
pgeo03041
]
Common components
Common spliceosomal components
General mRNP proteins
117467747 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
BRAP2
RRM_3
Motif
Other DBs
NCBI-GeneID:
117467747
NCBI-ProteinID:
XP_033967482
LinkDB
All DBs
Position
22:2549454..2558655
Genome browser
AA seq
348 aa
AA seq
DB search
MAVRRGHIKYMKDDLQEAFDMSNGYEEHMGGDEGKDSKTNLIVNYLPQSMSQDELRSLFS
SIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDADRAISTLNGLRLQSKTIKVSYARPSSD
TIKDANLYISGLPKAMTQKDVEDMFSRFGHIINSRVLVDQATGTTGASRGVAFIRFDKRA
EAEEAVKTLNGQKPPGAAEPITVKFAANPNQVKNTQIISQLYHNQSRRFGGPVHHQAQRF
RFSPMGVDHMSGVGNVNVPGNSNSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRD
FNTNKCKGFGFVTMSNYEEAAMAIASLNGYRLGDKMLQVSFKTSKGHK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcgtagaggacacataaagtacatgaaagacgatctgcaggaggcgtttgac
atgtcgaacggttacgaagagcacatgggaggggacgaggggaaggactccaagaccaac
ctgatcgtgaactacctgcctcagagcatgtcgcaggacgagctgcggagcctcttcagc
agcatcggagaggtggagtccgccaagctgattcgagacaaagtcgcaggccacagttta
gggtacggatttgttaactatcttaaccctagtgatgcagacagagctatcagtacactg
aacggactaaggctacagtccaaaactatcaaggtttcatacgcacggcccagctctgac
accattaaggatgccaacctgtacatcagcggcctgccgaaggccatgacccagaaggac
gtggaggacatgttttcacgctttggacacatcattaactctcgtgtgcttgtggaccag
gccacaggcacgacaggcgcttcccgcggggtggctttcatccggtttgacaagcgggcg
gaggcagaggaagctgtcaaaactctgaatgggcaaaaaccacccggagccgctgagcca
atcacggtgaagtttgccgccaacccgaaccaggtgaagaacacgcagatcatctctcag
ctctaccacaaccagtcccggcgcttcggggggcccgtgcaccaccaggcgcagcgcttc
aggttttctcccatgggcgttgatcacatgagcggcgtggggaacgtcaatgtgcccggg
aactccaactccggctggtgcattttcatctacaacctgggccaggacgccgacgagagc
atcctctggcagatgttcggcccgttcggcgccgtcaccaacgtcaaggtgatccgagac
ttcaacaccaacaagtgcaagggcttcggcttcgtcaccatgtccaactacgaggaggcg
gccatggccatcgccagcctgaacggctaccggctcggagacaagatgctgcaagtgtcc
tttaagaccagcaagggccacaagtaa
DBGET
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