Pseudochaenichthys georgianus (South Georgia icefish): 117467767
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Entry
117467767 CDS
T09629
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117467767 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117467767 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117467767 (kars1)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117467767 (kars1)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117467767 (kars1)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117467767 (kars1)
Prokaryotic type
Other AARSs
117467767 (kars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
117467767
NCBI-ProteinID:
XP_033967507
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All DBs
Position
3:36596757..36609897
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AA seq
611 aa
AA seq
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MLCLVRAVGQQLCQAFAVRGQWLKCASPCTAAVHAHMYGIRWRGDKSELKRQMKADKKAS
EKEARVKEQLDLKNKSNDKGAEDACALDEETLDPNQYFKIRSQAIQELKGTAEDPYPHKY
HVDLSLTEFIEKYNHLQPGDQLTEVALLNVSGRVHAKRASGAKLIFYDLRGEGVKLQVMA
NSRSYKSEEAFVAINNKLRRGDIIGVRGIPGKTKKGELSIIPTEMTLLSPCLHMLPHLHF
GLKDKETRFRQRYLDLILNDYVRQKFITRAKIITYLRSFLDQLGFLEIETPMMNIIPGGA
VARPFVTYHNDLDMNLFMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTC
EFYMAYADYHDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGKAFEIDFTPPFRRLSMTG
DLEKIMGVKFPPTDSYDSEETRKFFDELCAKKGVECPSPRTTARLLDKLVGDYLEVTCIN
PTFICEHPQIMSPLAKWHRTQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAMA
KAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPDDN
KTSAPTEGTAV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctggtcagggcagtcgggcagcagctgtgccaggcctttgcggtcagggga
cagtggttaaaatgtgcatccccatgtacagctgcagtccatgcacacatgtacgggatc
cgttggagaggtgacaaaagtgagctgaagagacaaatgaaagctgacaagaaggcgtct
gaaaaagaagccagggtcaaggagcagttggatctaaaaaataaatccaatgataaagga
gccgaagatgcctgtgcgttggacgaggagacgcttgacccaaatcaatactttaagatc
cgctcgcaggccatccaggaactgaagggcacagcagaggatccatatcctcacaagtat
catgtagacttgtcactcacagagttcatcgagaaatacaatcatctacagcctggagac
cagctgacagaagttgctctcctcaatgtgtcaggccgtgtccatgccaagagggcttct
ggtgccaagctgattttctacgacctgcgaggtgaaggcgtcaagttgcaagtcatggcc
aactcaaggagctacaagtctgaggaggcctttgtggccataaacaacaaactgcgtcgc
ggcgatattatcggtgtccgtggtatcccagggaagacaaaaaaaggggagttgagcatc
atccccaccgagatgacacttctttcaccatgtttgcacatgttgccccacctccacttt
ggcctcaaagacaaggaaacaaggttccgccagcgctacttggatctgattctcaatgac
tatgtgaggcaaaagttcattactcgcgccaaaatcatcacatacctgcgcagcttcctt
gaccagctgggatttttggagattgaaacaccaatgatgaacattattcctggtggagca
gtggcccgtccgtttgtcacctaccacaatgacctggatatgaacctgttcatgaggatc
gcgcctgagctctaccacaagatgcttgtggttggtggaatggacagagtgtatgaaatc
ggtcgtcagttcagaaatgaaggcatcgatcttacccacaatccagagttcaccacctgt
gaattctacatggcatatgcagattaccatgacttgatggaaatcacagagaaacttctc
tcaggaatggtgaagcacatcactggaggatacaaggtgacttatcaccctgacggtcct
gaggggaaggcctttgagatcgacttcacgccgccattcagaagactgagcatgactgga
gacctggagaagatcatgggagtgaaattccctcctactgacagctatgacagtgaagag
acacgtaaattctttgacgagctgtgtgcaaagaaaggagttgaatgtccttcacccaga
accactgctcgtctccttgacaagttggttggagattaccttgaggtcacctgtatcaac
ccaacattcatctgtgaacatcctcaaatcatgagtcccttggcgaaatggcaccgaacc
cagaaaggcctgacagagcgttttgagctctttgtaatgaagaaggaaatctgcaatgct
tacaccgagttgaatgatcccgtcagacagagagagcttttcgagcagcaagccatggcc
aaagctgagggtgatgatgaagccatgttcatcgatgagaccttctgcacggctctggag
tacggactgccaccgacagccggctgggggatgggcatcgatcgtgtcgccatgttcctc
accgactccaacaacatcaaggaggtgttgctcttcccagccatgaagcctgacgacaat
aagacatcagcgcccacagagggcaccgccgtctaa
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