Pseudochaenichthys georgianus (South Georgia icefish): 117467824
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Entry
117467824 CDS
T09629
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12 isoform X1
KO
K20309
trafficking protein particle complex subunit 12
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117467824 (trappc12)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117467824 (trappc12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_8
TPR_6
TPR_17
ANAPC3
TPR_16
Coatomer_E
ARM_TT21_5th
TPR_11
ARM_TT21_2nd
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
117467824
NCBI-ProteinID:
XP_033967583
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All DBs
Position
22:complement(21671907..21708187)
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AA seq
837 aa
AA seq
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MRSICISVSAVRSSKMDSEEAPAQRPVTLEITVEDVTTEAPGPDPPKLTISQTPLRENLL
PQVESIDLGGEFSTPQEDSSATPSESLMDKLNDQMMESVLISDSPNNSEEEDDAPMDSFL
DAVEEEDHFHETSVDKEEQGEIGQNTTEIEVTVEEQEKDSSVEKVDEETREQTDTEEQVI
SCVSLQVDEHSPSDPYSGEPSLLEAQETQDYSVPVCTIFSHGTHPKSLVPDGFQPTLIKS
PSFSMGSGVETSEAVTPSKLMAPLVCQPSPSLSKFFNDNGHVNPASDFFDSFTVPSSFIS
VSNPNADIPPGATPASIAPTPERQLSSTSSSISNPGGALDSSAPTPSSVFTPSESTAKAQ
PPPSQEAPAQAPAPAPQPQPFNTLQAVFSGSDDPFATALSLSEVDRRHDSWLPSEETRKL
LISVVTQQYSPAYVETTRLTMPGLKFDNLQGDAVKDLMLRFLGEAAAMKRQVLTANSVEQ
SFTGLKRLISSKNWRAAVDLTGRLLTDHGQGYGKAGQQSSHTTDSLQLWFVRLSLLTKLN
LFQNAELEIEPFGNLDQPDLFYEYYPTVYPGRRGSMVPFSMRLLHAELPQYLAKPQEALD
RLHNLKTVCLAILENLEKGLAEDGSMITLTQENRQGSLKLWRSRLSRVMYSMANCLLLMK
DYVLAVETYHSIIQYEPQQRVQLLSGIGRIFLQIGDVKTAERYFQDVEKACQMTGSQPSH
TTCVLMNRAFVSLSQNNYTEAHASFTEVLKIDPKNPVANNNAAVCLLYLGCLKESLGQLE
GLVQQDPALYLHESVLFNLTTMYELESSRSTQKKQALLEAVACREGDSFNTQCLKLV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtatatgtatatctgtcagtgcagtaaggagcagtaagatggacagtgaggag
gctcctgctcagaggccagtcaccttggagatcacagtggaagatgtaaccactgaagcc
ccaggcccagaccctccaaagctaaccatcagccagaccccactcagagaaaatctcctt
ccccaggtagagagcatcgacttgggcggggagttttccaccccccaggaagacagcagt
gctacaccttcagagagcctgatggacaagctaaatgaccagatgatggagagcgtcctg
atttctgactcacctaacaacagtgaggaggaggacgacgcccccatggactcctttctc
gatgcagtggaggaggaagatcattttcacgagacatcagtcgacaaagaggaacaaggt
gaaataggtcagaatacgacagagattgaagttacagtagaggaacaggagaaggatagc
tctgtggagaaagtggatgaagaaaccagggagcagacagacactgaggagcaggtgata
tcctgtgtctcactccaagttgacgagcacagcccgtctgatccctacagtggggaaccg
tcactactagaagctcaagagacgcaagattactctgtgccggtgtgcactatattcagc
catggcacccatccaaagtctttggtgcccgatggattccagcccaccctcatcaagtcc
cccagttttagcatggggagcggtgtagaaaccagtgaggcagtgacccccagcaagctg
atggcccccctcgtgtgccagcccagccccagtctcagtaagttcttcaatgataacgga
catgtcaacccagcctcagatttctttgattccttcactgtcccctcctccttcatctct
gtttcaaacccaaatgctgacatccctcctggtgccaccccagcgtccatagcccccacc
cctgagcgccagctctcctccacctcctcctccatctccaaccccggtggagctctggac
tctagtgctcccactcctagttcagtgtttaccccatctgaatctaccgccaaggcgcaa
cctcctccatcccaagaagccccagctcaagcccctgccccagcccctcagccgcagccc
ttcaacacgctccaggctgtgttttcgggcagtgatgacccatttgcgacagcgctgagc
ctgagtgaggtggaccggcgccatgattcctggctgccatctgaggagaccaggaagttg
ctgatctctgtggtcacccagcagtacagccctgcctatgtagagaccaccagactcact
atgcctggactcaagtttgacaaccttcagggcgatgctgttaaagacttaatgcttcgt
ttcctgggagaagcggcggcaatgaagcgtcaggtcctcactgccaactctgtggagcag
tccttcacgggcctcaaacgtctcatcagcagcaagaactggcgggccgcggtggatctg
acgggccggctgctgacagatcatggtcaggggtacgggaaggccggccagcagagctcc
cacaccaccgactcactgcagctgtggtttgtgcggctctccctcctgaccaagctgaac
ctcttccaaaacgctgagctggagattgagcccttcggcaacctggaccaaccagacctc
ttctatgagtactaccccactgtttaccctgggaggagaggctccatggtgccgttctcc
atgcggctgctgcacgccgagcttccccagtacctggccaagccccaagaggctctggac
cgcctgcacaatctcaaaaccgtctgcctcgctattctggagaacttggagaaaggattg
gctgaggatggcagcatgatcaccctgacacaggagaataggcaagggtctcttaagctg
tggaggtctcgtctcagccgggtcatgtactccatggccaactgcctgctgctgatgaag
gactatgttctggctgtggagacctatcactccatcatccagtacgaaccccagcagaga
gtgcagctgctcagtggcataggacgcatcttcttgcagatcggagacgttaaaacggca
gagaggtacttccaggacgtggagaaggcgtgccagatgacagggagccagcccagtcac
accacatgcgtgctgatgaacagggcctttgtctccctcagtcagaacaactacactgaa
gcgcacgcatccttcactgaagtcttaaaaattgacccaaagaaccccgttgccaacaac
aacgcagcggtgtgcctgctctacctgggctgtctgaaggagtccctgggccagctggag
ggcctggtgcagcaggaccccgccctctacctccacgagagcgtcctcttcaacctgacc
actatgtacgagctggagtcgtcccgcagcacccagaagaagcaggctctgctggaggcc
gtggcctgcagggagggggacagcttcaacacgcagtgcctcaagctggtgtga
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