KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117467843
Entry
117467843         CDS       T09629                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082  ATP-dependent chromatin remodeling
pgeo03083  Polycomb repressive complex
pgeo04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117467843
   03083 Polycomb repressive complex
    117467843
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117467843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117467843
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117467843
  Histone modification proteins
   HAT complexes
    HATB complex
     117467843
   HDAC complexes
    Sin3A-HDAC complex
     117467843
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117467843
    PRC2.2
     117467843
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117467843
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117467843
  Chromatin remodeling factors
   NuRD complex
    117467843
   NuRF complex
    117467843
   NuRF complex (fruit fly)
    117467843
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 117467843
NCBI-ProteinID: XP_033967615
LinkDB
Position
22:18601625..18606147
AA seq 429 aa
MADKEDIAFAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR
PEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKI
EIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRG
HQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTAVVEDVSW
HLLHESLFGSVADDMKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSAD
KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS
PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE
GAAESEVQA
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggctgataaagaggatattgcatttgcaggtgcatttgatgatgccgtggaggagagg
gtgatcaatgaggagtacaagatatggaagaagaacacgcctttcctctacgacctggtc
atgacacacgccctggagtggcccagcctcaccgcccaatggctgcctgatgtcaccagg
ccagaggggaaagactacagcgtacacaggctggttttgggaacacacacgtctgatgag
cagaatcaccttgtcattgctagtgttcagcttcctaatgatgacgcgcagtttgatgcc
tcacactatgacagcgagaaaggagagtttggaggttttggatctgtcagtgggaagata
gagattgagatcaagataaaccatgagggtgaggtgaacagagcccgctacatgcctcag
aacccttgcatcatcgccactaagacccccaccagcgacgtgctggtctttgactacaca
aagcacccctctaaacctgacccttctggagagtgcaccccagatctgcggttgcgaggc
caccagaaggagggttatggtctctcctggaacccaaacctcagcggctgcctcctcagt
gcctctgatgatcatacaatctgcctttgggacatcagcacagtgcccaaagagggaaag
gtagtggatgccaagaccatcttcacaggccacacggccgtggtggaggatgtttcctgg
cacctgctgcacgagtctctctttggatctgtggccgatgacatgaaactcatgatctgg
gacacacggtccaacaacacctccaagcccagccatgcagtggacgcccacactgctgag
gtcaactgcttatccttcaacccctacagcgagttcatcctggcctctggctctgcagat
aagactgtggctctttgggacctgaggaacttgaagctgaagctgcactcgtttgagtct
cacaaggacgagatcttccaggttcagtggtctcctcataacgaaaccatcctggcctcc
agcggcaccgacaggaggctcaatgtgtgggacctcagtaagatcggagaggagcagtca
ccagaggacgctgaggatggcccccctgaactgctgttcatccacggcggacacacggcg
aagatctcagacttctcttggaaccccaacgagccgtgggtcatctgctctgtatcagag
gacaacatcatgcaagtctggcaaatggctgaaaatatctacaacgatgaggacccagaa
ggcgccgcagaatcagaagtccaggcgtga

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