Pseudochaenichthys georgianus (South Georgia icefish): 117467901
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Entry
117467901 CDS
T09629
Symbol
ccdc88c
Name
(RefSeq) LOW QUALITY PROTEIN: protein Daple
KO
K25811
protein Daple
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117467901 (ccdc88c)
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GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
117467901
NCBI-ProteinID:
XP_033967707
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All DBs
Position
22:30831397..30896907
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AA seq
1937 aa
AA seq
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MDVTLSELLSTFMESPLVVWVRTLGPLGSCEDAGSEEQLNMFMELVDGVFLHKIMTHIDP
SPTNQRLTKNVNNDVSLRLYNLTVLTRHIRTYYQETLQQLVLMPLPNILSIAKDPISVKS
MEGLKSLLLLVLGCAVQCERKEEMIEKIKLLDFDTQAAIVSHIQEVTHNQLNVLDLSWLD
EGPELGQEELEPLSRNMAASLQQLIDQRDKDSEVIVDLTQERDYLSSQQPQEGCRNLGMN
SPERGQGSGGGGMSNGGSSVSTSGLTKEEKQHLAVELADTKSKLRRYRQELEEKTEQLMD
SKHEVERLDQELQRQKQENQSLCCEARSVRVYRDEVDSLRERAARVDRLETELTRCKEKL
NDVHFYKTRMEELREDNETLIETKVLLEEQLSASRGRCDKLHTLEKDNLLLRAKLNDLEM
ERDNERRRMEELLEENMLLEIGQKQSMNESAHLGWELEQLSKNHDSTNTETRKSLVHELN
ECVSSRVLKLEKENRELQTSVETLKEEKHLLQEQQLHTQELGRENQGFSNKIERLQGLLE
QERLTNQDMEALGEEILKEKLNVEREVHTLRAEKDRQISELESEKQHLSDAVASLQERAQ
SNSEARVREVETQNRLLHQNITDTSSRLASLETQLKLANEEAERLGSRAGRCEELERETA
RLERGRDTLSRELASLRVCSEQSEALEKQVSSLEQEVHRLKRELDEAQGEQQRLGRQEAE
HSLLSKENLDLRCSMENLRSSSTRLASLQDEHKEVQGQTQDLQRKLKEARGEAQGEKKRA
ERLEQNMAALNQEKHRLEEEIQRSKEDREEEERERQETHVREEELRREVQELKNERKRRE
EVEEERRKLQVALEQAEKGRKHLEKESWRSRTLLEGKETELEEKARRLATVEKEGATLKK
DMERLREVSVKAKELEKENKELQKQTTIHKRTLATLREDLVSEKLSVQQQSVDLERLNGE
LEKMGLNKEKLLQQEHTLEDSRYRLLESRLEDTVQQTMKIKEEKIFSLERKLEESKKLNA
GRSTGEENHNSHHHSESDRGQGSATAELLKIKDHIIDIEKNNSSLLTESSLLRGQLKQLE
NQNTSLNNQMMGLQRHTSTLQEQNSALHKETAKLQVENSTISSQSASLMAQNAVLQGQVT
ALESEVESWQRQREEAWRGRESVLSDHERLLNVHGRQAQEYEQLISQHAALKGKQRALES
EQRTLHSKYCVLVQQKEKWDEQEGHGRKEKEELNQELQKTRLLQQENLQLKSEVDRLAES
QSQQSVQCEGLQHRVNDVKGLLSSSQQEVSRWMAQHDSLMEQHQGLDLTMTKLDNHCELL
SRLKGNLEEENHHLLSQINLLSQQNHTLLERSMESKELYHQEQKLYIDKLNALRRQKEKL
EEKIMDQYKFYDPTPKKRSQWSGAKALAKLIKPRKESSRERGGDRDKEAGKDRERAKSAP
DIPLPSPPPLLPPKTPPPHHQRSGNYTQASSHAHSNHNNHTASLGPQSPAITPISGGLTD
RGRGGYRSSTPGGSSESVNGENGHGQGPAHKALSSTPSHQSPSLGLPNNSNPRLGGPARR
PRGLLFDEDSRHNTSDSIFSPHGNTGGLPGSADFSHNTSSSSSPVNCRDPSDRQTRSASL
SSDDVTGLSQSQLALSRSSTLPYDHVPQRAQPQRGVGVRSKTCTSSPVKDMLTLEEFLHE
SNLKSPPMVSTGSKEDLMTDYFTRSPAPSGPPGKDQAPTSYVTPTVQASNQRPGQSVKPL
PRQPVGQSPASGQTVIQRSGQSLSRAFSLASADLLRSNGPDSFHGNDGQSDGVVRRPGAG
ANGRERPLSARLAGPTNQPADGSFLNLPIHHSTSLNLQTERHAERGRTPDSRNGPTPSST
YHKVAEVAMVTPVRAVSATRPEEPSVKGEGLMPGDSSHVEKESEKAGCGSVERPKSTPSS
PDPNNDPQTVWYEYGCV
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgactctgtccgagttactgtccactttcatggagtctccgctggtggtgtgg
gtgcggacgctgggccctctgggttcctgtgaagacgcgggctcagaggagcagctgaac
atgttcatggagctggtggacggcgtcttcctgcacaagatcatgacacacattgacccc
agccccaccaatcagagactgaccaagaatgtgaacaatgacgtgtcgctccgcctctac
aacctgaccgttctcaccagacacatccggacgtactaccaggagaccttacagcagctc
gtcctcatgccccttcccaacatcctctccatcgccaaggatccaatatcagttaagagc
atggaggggctgaaaagtcttctgctgctggtactaggctgcgctgtccagtgtgagcgt
aaggaggagatgatagagaagatcaagctgctggactttgacactcaggctgcgattgtc
tctcacatccaggaggtgacacacaaccagctgaacgtcctggacctctcctggctggat
gaagggccagagctcggtcaggaggagctggagcctctgtcccgcaacatggctgcgtcg
ctacagcaactgatcgaccagagagacaaagatagtgaggtgatcgtggatctgacccag
gagagggactacctgtccagccagcagccccaggagggctgcaggaacctgggcatgaac
agcccggagcgggggcagggctctggaggaggggggatgagtaacgggggatcgtctgtc
agtacgtctggcctgaccaaagaggagaagcagcatctggctgtggagctcgctgacacc
aaatccaagctccgcagatacagacaagaactggaggagaagacggagcagctgatggac
tctaaacatgaagtggagcgactcgatcaggagttgcagagacagaaacaagagaaccag
tctctgtgctgtgaggcccggtcagtcagagtgtaccgggacgaggtggactctctgagg
gagagagcagcccgcgtggaccgactggagacggagctgacccgctgcaaagagaaactc
aacgatgttcacttctacaagaccaggatggaggagcttcgcgaggacaacgagacactc
atcgagaccaaggtgctgttggaagagcagctgtccgcatccagggggcgctgtgacaaa
ctgcacacgctggagaaggacaacctgttactacgagctaaactaaacgacttggaaatg
gagcgggacaatgagcgtcgcaggatggaggagctgctggaggagaacatgctgctggag
atcggacagaagcagagtatgaacgagtcggctcatctgggctgggagctggagcagctg
tccaagaaccatgacagcactaacacagagactcgtaagtccttggtccacgagctgaac
gagtgtgtttccagtcgggtgttgaagctggagaaggagaaccgggagctccagacctct
gtagagacactgaaggaggagaagcacctcctgcaggagcagcagctgcacacccaggag
ctgggccgggagaaccaaggcttcagcaataagattgagcgtctgcagggtctattggag
caggagagactgactaatcaggacatggaggctctgggggaggagatactgaaggagaaa
ctgaatgtggagagagaggtgcacactctgagggcggagaaagacagacagatctcagag
ctggagagtgagaagcagcacctctctgacgccgtggcgtcccttcaggagcgcgctcag
tccaacagcgaggccagggtccgtgaggtggaaacccagaaccgcctcctgcaccagaac
atcactgacaccagctcccgattggccagcttagagacccaactcaaactggccaatgag
gaggcagagaggctggggagcagggcggggcgatgtgaggagctagagcgagagacggcc
aggctggagaggggcagggacactttgagcagagagctggcctctctgcgtgtttgcagc
gagcagtcggaggctctggagaagcaggtgtcctccctggagcaggaggtgcaccggctg
aagcgggagctggacgaggcccagggggagcagcagcggctggggaggcaggaggcggag
cacagcctgctgtccaaggagaacctggacctgcgctgctccatggagaacctgcgctcc
tcatccacccgcctggcctccctgcaggacgagcacaaggaggtgcagggacagactcag
gatctgcagaggaagctgaaggaggccagaggggaggcgcagggagagaagaagagggca
gagaggctggagcagaacatggccgctctgaaccaggagaagcatcgcttagaggaggaa
atacagagaagcaaagaggaccgggaagaggaggagagggagaggcaggagacgcatgtc
agagaggaggaactgagaagggaagtgcaagaactgaagaatgagcggaaacggagggag
gaagtggaagaggagaggaggaagctccaagtggccttggagcaggcggagaagggcagg
aagcacctggagaaggagagctggaggagcaggacactgctggaggggaaagagacggag
ctggaggagaaagccaggaggttagccacagtggagaaggagggagccactctgaagaag
gacatggagaggctgagggaggtgtcggtgaaagccaaagagctggagaaggagaacaaa
gagctgcagaaacagacgactatccacaagaggaccctggccacgctgagagaggacttg
gtgtcagagaagctgagtgttcagcagcagagtgtcgacctggagagactcaatggagaa
ctggagaagatggggctgaacaaagagaagctgctgcagcaagagcacacgctggaggac
agcaggtacaggctactggagtctcggcttgaggacaccgtccagcagacgatgaagatc
aaagaggagaagatcttttctctagaaaggaaactggaagagagcaagaagctcaacgct
ggccgatccactggggaagaaaaccacaactcccatcatcattcggaaagtgaccggggt
caagggtcagccacggcagaactgctaaagatcaaagatcatattatcgatatagaaaag
aataactcctccctgctgacggagagcagcctgctgagggggcagctcaaacagctggag
aaccagaacacgtctctgaacaaccagatgatggggctgcagcgacacacctccaccctg
caggagcagaactcagcactgcacaaggagacagcgaaactgcaggtggaaaactccacc
atctcttcccagagtgcatccctcatggcccagaatgccgtgctgcagggccaggtcacg
gccttggagtcggaggtggagtcgtggcagaggcagcgggaggaggcgtggcgaggcaga
gagagcgtgctcagcgatcacgagcgcctgctgaacgttcacgggaggcaggctcaggag
tacgagcagctgatcagtcagcacgccgctctgaagggcaaacagagggcgctagagagc
gagcagcgcacactgcacagcaagtattgtgttttggtgcagcagaaggagaagtgggac
gagcaggaggggcacggccgaaaagagaaggaggagctcaaccaggagctccagaagact
cggctactgcagcaggagaatctgcagctcaaatcagaagtggacagactagcagagagc
caatcccagcagtccgtgcagtgtgaggggctgcagcaccgagtgaacgatgtgaagggc
ttactaagctcctcccagcaggaagtgagtcgatggatggcacaacacgactccctgatg
gagcaacaccagggcctggatctcaccatgaccaagctggacaaccactgtgagctgttg
agtcgactgaaagggaacctggaagaggagaaccaccacctgcttagtcagatcaacctg
ctgagtcagcagaaccacactctcctggagcggagcatggagagcaaagagctgtaccac
caggaacagaaactatacatagataagctgaacgctctacgtcgtcagaaagaaaaactg
gaggagaagatcatggaccagtacaagttctacgaccccacgcctaaaaagaggagccag
tggtctggagccaaagctttggccaaactgatcaaaccccggaaggagagcagcagggag
cgggggggcgaccgggacaaggaggcaggcaaagaccgagaacgagccaagagcgccccg
gacatcccactgccctccccccctcccctcctccctcctaaaacccccccaccacatcac
cagcgctcaggaaattacacgcaggccagcagccatgcccacagtaaccataacaaccac
accgccagtctgggaccccagagccctgcaatcacacccatcagcggaggtttgacggac
aggggccgggggggttatcgtagcagcaccccaggaggcagcagtgagagtgtcaacgga
gagaacggacatggacaaggtccggcccacaaagctctgagctccactcccagccatcag
tccccctcactgggcctccctaacaactccaacccccgactgggaggcccggcccgccgg
cccagaggtctgttatttgatgaagactctcgccacaacacttccgactccatatttagt
ccgcatggcaacacgggaggtctcccggggtcggcagacttcagccacaacacctcaagc
tccagctcacccgtcaactgcagagacccatcagatcgccagactcgctcagccagcctc
tccagtgatgatgtcacaggtctcagccaatcacaactggctctgtcacgtagctccacc
cttccatatgaccacgtgccccagagggctcaaccacaacgtggggttggggttcggagt
aagacttgtacgtcttctcctgttaaggacatgttgaccctggaagagtttctacatgag
agcaacctgaagtcgcctcctatggtgtcaacaggaagcaaggaggacttaatgactgac
tacttcaccagaagtcccgccccctcgggtccccctggcaaagatcaggctcctaccagc
tatgtcacgcccactgtgcaggcatccaaccagaggccgggacagagcgtcaagccgttg
ccccgccagcctgtgggccaatcaccagcctcgggccagaccgtcatccagaggtccggc
caatcactgagcagggcgttcagcctggcctcggctgatttgctgcgctcaaacggacca
gacagtttccatggaaatgacggccaatcagatggggttgtccggagaccaggggcaggg
gctaacgggagggaacgccctctgtctgctcggctggctggcccaaccaatcagcctgca
gacggcagcttcctgaatctgcccattcaccattccacctctctcaatctgcagacagag
agacacgcagagagggggaggactcctgactctcggaacggccccaccccgtcctccacc
taccacaaggtggctgaggttgccatggtcacccctgtcagggctgtgtcagccacgcgg
cctgaagaaccctcggtaaaaggggaggggctaatgccaggtgactcctcccatgtagag
aaggagagtgagaaggcagggtgtggatctgtggaacggcccaaaagcacgccctcgtcc
cccgatcccaacaacgaccctcagactgtgtggtacgagtacggctgtgtctga
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