Pseudochaenichthys georgianus (South Georgia icefish): 117467903
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Entry
117467903 CDS
T09629
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117467903 (rin3)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117467903 (rin3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
GPW_gp25
EcsC
RA
DUF2935
Motif
Other DBs
NCBI-GeneID:
117467903
NCBI-ProteinID:
XP_033967711
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All DBs
Position
22:30623750..30643903
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AA seq
1179 aa
AA seq
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MMEASVVSTDTGHTSPLTGPLDSPPTPSPASIPPASPLSPPSLPSSNLPLRPCRPKPPPP
LKSSCPPAATPPALPPPLPPVSKPPPPHPISKSPPTLSSNPPPPSLPPPLSPTPASPPPI
LSPQPSDPIPCPPPLLDPLSPTIPSSSSPPTPPVVPPSCSTPPLLSPLDRLLGSVSVWQP
KGLSQDRTTSILEKETSGAFLVHSTEDKAMTLSVRLPDELGEPSVHNLRVKQHKTFLHFD
GSSLVFDDIFKLIAFYCASRDILAVPLKLPRAITTATKREELEIISAMGADFWTSGLSLQ
AENQEQVLDQNQSRPYMYVNPVPMEDSPSKDLNTSSISKLDIIANHSPTPSLQNGEAPQK
MSTEVKGRSKKVPSPDIKYKRPPPRPPSMGLGSGVGLLFSSPPSPHTSVTDRKEEGKGGA
GEREERKLVSPSLTPSRPPVPPQSRAAPALPPAPLRRTSSRKITDREVGEGTEREKGQHP
VKITEREGGGEGSKSGQPSEGGEEESMHQEEEGEKDNEKKEEEEDDKQKSSSLCALLTKK
PTRPVPPPRRKPSSQNTPVCPATGGSANQTAGMRGPPPSPARRPDVSLYSPQGGAVLVTD
PDSRSTSSTEEEAELSQEQEQNQNRPAESRIPKVAVKRTPTVMLDRARYRLSTVLTGLIS
HDRRLTQRIVELARDPLSYFGNLVKEHRAFTLETMSNHSTSTELLQEIRQMMTQLKSYLL
QSTELQAMLEPHQYSEEKLESIAEAALCKSVLKPLREHIYQSLEKLRTNDSSLKQLAQNQ
SVILGSTTTALGVTTAVPEASALEKISIKLSNVHLEYSPQKKIELMLKACKIIYDSMAVS
SPGRAHGADDFLPVMMYVLARSNLANLQLDVEYMMELMDPALALGEGSYYLTTTYGALEH
IKTFDQQRTATRQLSREVQDSIHRWERRRTLNQERMAQGSVRDFLTVSCPEFGINLKTLG
VLPTTTMEQLAEQCAARFEQDSYILSVYVDGVHRPMAPTELALIVKSSSKPGAYCFVYHH
ADQPISPPPRSYPADAPPTSPALTAPPALTAPPAPSAPTAVPAPRTRPAPPVLPAPPVLP
APPVLPAPSILPAPSILPAPPVLPAPSVLPAPSILPAPPILPATPVLPAPSAPSAPPALP
APPAPSAPTAPPAESFSPDEPADVDLVEQEVEEESLISL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagccagcgtagtttccacggacacaggccacacaagccctctgacaggacca
ctcgactctccacccaccccctcccctgcctccatccctccagcttctcccctctctcca
ccttccctgccatcatccaaccttccgctccggccatgtcgacccaaacccccgcctccc
ctcaagtcctcctgtcctcctgctgcaactcctccagcccttcctccccctctccctcct
gtctccaaacctcctcctcctcatcctatctccaaatctcctcccaccctgtcctccaac
cctcctcccccatctcttcctcctcctctctcccctactccggcgtctcctcctcccatc
ctttctccccagccctctgatcctattccttgtccccctcctcttctcgatccattatca
ccaacaattccatcctcctcatctcctccaactccccctgttgtcccaccatcctgttca
actcccccattgctgagtcctttagatcggctgcttggtagtgtctcggtgtggcagccc
aaaggactcagccaggaccgaaccaccagtatattggagaaagagacatccggggcattc
ctggttcacagcacagaggacaaggccatgacgttgtcagtacgcctgcctgatgaactg
ggggagccgtccgtacacaacctgagggtcaaacaacacaagacatttcttcacttcgat
ggttcttctctggtttttgatgacatcttcaaattgatcgccttctactgtgccagcagg
gacattctggccgtcccactgaagttaccccgggccatcaccacggcaactaagagagag
gagctggagatcatctctgctatgggtgcagatttctggacgtccggtctgagcctgcag
gcagagaaccaggagcaggttctggatcagaaccagagtagaccctacatgtatgttaac
ccggtccctatggaggactcccccagcaaagacctgaacacctcctctatctccaaactg
gacatcatcgccaatcatagccccaccccctccctgcagaatggagaagcccctcagaag
atgagcacagaggtcaaagggcggtccaaaaaggtgcccagtccggacattaaatacaag
cgtcccccgcctcgaccccccagcatgggcttagggtcgggggtgggcctcctcttctcc
tctcccccctcgcctcacacttctgtaactgatagaaaagaggaaggaaagggaggggca
ggggagagagaagagaggaagttggtgtcaccatcactcactccgtccaggcctccggtc
cccccgcagagccgagccgctcccgcactgcctcctgcgcctctacgtcgcacctcctcc
cggaaaatcaccgaccgagaggtaggagaggggacagagagagagaagggacaacatcct
gtgaagataactgagagagagggaggaggagagggaagtaaatcaggtcagcccagtgag
gggggtgaagaagagagcatgcatcaggaggaagagggggaaaaggacaacgagaagaag
gaggaagaggaggatgataaacaaaaatccagctccctctgtgcgctgttaaccaagaag
cccacccgcccggtccctcccccgaggaggaaaccctcttcccaaaacacacctgtgtgc
cccgctacgggaggatcagccaatcagactgcagggatgagagggccccctccatcccca
gcgcggaggccggacgtgtcgctgtactcgccacaagggggggcagtgctagtaacagac
cccgactcccgctccaccagcagcacagaggaagaagcagagctgagccaggaacaggag
cagaaccagaatcgccccgcggagagtcgtatccccaaggtagcagtgaagagaaccccc
actgtgatgttggaccgagcccgctaccgcctgtccacggtcctcaccggcctcatcagc
cacgaccggcgcctcacgcagcgcatcgtggagctggcccgggacccgctgagctacttc
ggcaacctggtgaaagagcaccgtgcgttcaccctggagaccatgtcgaaccactccacc
tcgacggagctgctacaggagatccgacagatgatgacccagctgaagagctacctgctg
cagagcactgagctgcaagccatgctggagccacaccagtattcagaggaaaaactggag
agcatcgcagaggctgctttgtgtaagagtgtgctgaagccactgagggagcacatttac
cagagtcttgagaagctgcgcaccaacgacagcagcctgaaacagctggcacagaaccag
tctgtcattctaggcagcaccaccacagctttaggagtaaccactgccgtccctgaggcc
tctgctctggagaagatcagcatcaaactgagcaacgtgcatctggagtattcaccccag
aaaaagatcgagctcatgctgaaggcatgcaagatcatctatgactccatggctgtcagc
agtccagggcgtgcccatggcgctgatgacttcctgccagtaatgatgtacgtcctggct
agatccaatctggccaacctgcaactggatgtagaatacatgatggagctgatggacccc
gccttagcgctaggagaaggttcctattatctgacaaccacctatggggctctggagcac
attaagacgtttgaccagcagaggacagcaacacggcagctcagcagagaggttcaggac
tccatccaccgctgggagaggagacgcacgctgaaccaggagcgcatggcccagggatct
gttcgggacttcctgacagtgtcttgtccagagtttggaatcaacctaaaaactctgggg
gtcctgcccaccaccacgatggagcagctggctgagcagtgtgctgcacgctttgaacaa
gactcctacatcctcagtgtgtatgtggatggtgttcaccggcccatggcccctacagag
ctggccctcattgttaagagcagttccaagcctggagcttactgcttcgtctatcaccat
gccgaccagcccatcagcccgcccccccgcagctacccggctgacgcacctccaacttca
ccagctttaacagctccaccagctttaacagctccaccagctccatcagccccaacagct
gtaccagcaccacgcactcgacccgcaccacctgttttaccagcaccacccgttttacca
gcaccacccgttttaccagcaccatccattttacctgcaccatccattttacctgcgcca
cctgttttaccagcaccatccgttttaccagcaccatccattttacctgcgccacccatt
ctaccagcaacacccgttcttccagctccatctgctccatctgctccacctgctttacca
gcaccaccagctccatccgctcctaccgctccacctgcagaaagcttctccccagatgag
cctgctgatgtggacttggtggagcaggaggtggaggaggagagtttgatcagcttgtag
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