Pseudochaenichthys georgianus (South Georgia icefish): 117467942
Help
Entry
117467942 CDS
T09629
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117467942 (nrde2)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117467942 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Rib_recp_KP_reg
Motif
Other DBs
NCBI-GeneID:
117467942
NCBI-ProteinID:
XP_033967775
LinkDB
All DBs
Position
22:25542194..25559140
Genome browser
AA seq
1196 aa
AA seq
DB search
MALFPAFAEVEPNKVEDSSKELDWLKNKSFQTEDALSLHSRFFEKTSERLNEKESSVGGY
VSSEEEEEEGDVPPKKKKKKSEKKKKKHKKHKKKSGRHSDSSGNETEIIFPSDLKREQEA
ESPHAAPLASCFSWLDDLKSPTEQPFCVDRKADQANWTYKSLYRGDVTRYRRKGHSSLGL
DPRKQGVSWEVSESNKKQKGGDKKKAADRYFSPVSRQLLRSEPLVPTLPTIPKDGNSIST
SSFLPLGGDEESKGGKTGDRVQTSSVNPLGVYDASTALWLQGKGQQQGQQEQEVQTGQNA
TLAGRTEEFNRRLREQPGDTQLWIQFIRYQDELSAAVFGGEAEQQGSEAVEHRKSSYRAL
LEKKLSIAERAVSTNHSCIALQLERLRICQELWEPSALAKEWKKLVFLHPNSAPLWREYL
LFTQSYFSIFSVSKVNSAYGKCLSTLSAVHDGSMVSHPALPGLEEDMLDIFTQQCHFLRQ
SGHSEKAISLLQAMIDFTFYKPDSVRGLSTKQQVEFFEPFWDSGEERVGELGARGWKAWM
LQQEKGGWLQPNAEEEEEEDEDEEEVKDRSQPRWTVWLEVETCREAAHWLPWRPDKAKGQ
SEEDCEDPDRQVLFDDIGPSLIRLSSPELQLRLLLRFLSFLGLPVDPVLSAAPCQPGLLL
ENLSLLTQGNELRRPLTSYDLPDPGVNSIGHMTILQGTRKWMGLGKLGERFLTNVLKMVQ
PVLPVQQRAALSLSWMQYEKLKVLRCLHGGNKKRLRFQGKSSKRVAKQLLKEPDNRSSLV
LWRGYAHLEWMLGNIDEARKVFSTATAMGGGKGLQSPALCELCLLWAQLEMEDGPTVGGG
GLVDLTASPAVCVLTRLAEGSSASSDQVISPVSILKARKSYEQVLTTGLSALEQNYQTNK
KAGMEDLLGEKPRLKGLMGCHALFQYLTTGIKAANAVYNQARDRMKELHQKLTQDKQLNS
SEDVASTDANQSDSSLSCRQYVSRLASECEALAVQQAALLRYHNSISVFPLATLRQTLTS
ALSTWVGSAPLWGLYVQVENRYHSAGRARRFFHSVTRDNSSVVPRLFAIVAEQQRKQLVD
AAQRSCCHDAALPILPENGLSNRIRGLFESAIATEMGSHCPLLWRMYMYFLVSEGKVDKA
TGIFYKALQNIPWAKGLYMDAAQLFPEHLQEFVDLMTEKELRVRLPLEELDILLED
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtttccagcttttgcagaagtagagccaaacaaagttgaagattcgtccaag
gaattagactggctgaaaaataagagtttccagactgaagatgccctctctcttcacagt
cgtttttttgagaagacgagtgagaggctgaacgaaaaggaatcaagtgtggggggatat
gtgagctctgaggaggaggaggaggagggtgatgtgccacccaaaaagaagaaaaagaag
agtgaaaagaagaagaaaaaacacaaaaaacacaaaaagaagagcgggagacattcggac
agcagcggcaatgagactgaaatcattttccccagtgacctcaaaagggagcaagaggca
gagagtccccatgctgctccgttagcaagttgtttctcctggctggatgacctcaagtcg
cccacagagcagccgttctgtgtggaccgtaaagcagaccaagccaactggacctacaag
tccctgtacagaggagacgtaaccaggtataggaggaagggccattcgtccttgggtctg
gacccccgcaaacagggagtcagctgggaggtgtcagagtcaaataagaaacagaaaggc
ggggacaagaagaaagcagcagacagatacttctctccagtcagtcgccagctgctgagg
tccgagccccttgttcctacattacccacaatacctaaggacggcaattccatcagcacc
tcctcctttctcccgctaggcggcgatgaggagagcaaaggaggaaagacaggtgacaga
gtgcagacatcctcagtgaatcctctgggtgtgtatgacgcctccacggccctctggctg
caggggaaggggcagcagcaggggcagcaggagcaggaggtgcagaccgggcagaatgca
acgctggccgggaggaccgaagagttcaacaggcggctcagagagcagccaggagacacg
cagctctggatacagttcatacgataccaggatgagctgagtgcagcagtgtttggagga
gaggcagagcagcagggcagcgaagcggtggaacatcggaagtcctcctacagagcgctg
ctggagaaaaagctgagcatcgcagagcgcgctgtatcgaccaaccacagctgcatcgct
ctgcagctggagaggctccggatctgccaagagctctgggagccctctgctctggccaaa
gaatggaagaagctggtgtttctccatccaaacagtgcccccttgtggagggagtatctg
ctgttcacccagagctacttcagcatcttctccgtgtcgaaggtgaactctgcgtacggg
aagtgtctgagcacgctcagtgcggtgcatgatggcagcatggtgtcccaccctgccctg
ccagggctcgaggaggatatgttggatatcttcacccagcagtgtcatttcctgcgtcag
tctggtcactcagagaaggccatttctctgttacaggccatgattgatttcaccttctac
aaacctgacagtgtacgaggactgtccaccaagcagcaggtggagttctttgagccattc
tgggacagtggggaggagagagttggagagttgggggcccgaggttggaaggcctggatg
ctccaacaggagaagggggggtggctgcagcccaatgcggaggaagaagaggaggaggat
gaggatgaggaggaggtgaaggatcgcagccagcccagatggacagtctggttggaggtg
gagacgtgtcgggaagcagctcattggctgccctggaggccggacaaagccaagggtcaa
tcagaggaggactgtgaggaccctgacagacaggtgttgtttgatgacatcggtccatca
ctcattcgcctgtcttcaccagagctccagctccgccttctcctccgttttctgtcgttt
ctcgggctgcctgtagaccctgtgctctctgctgccccctgtcagccgggcctgctgctg
gagaacctctctctgctcactcagggtaacgagctcaggcgtcctctgacctcctacgac
cttcctgaccccggggtcaactctattggtcacatgaccattcttcagggaacaaggaag
tggatggggcttgggaagctgggtgagaggtttctcactaatgtgttgaagatggtccaa
cctgtcctccctgtccagcagcgagccgccctgtcactcagctggatgcagtatgagaaa
ctcaaggtgttgcggtgcctgcatggcggcaacaagaagcgtctccgctttcagggcaag
agcagcaagcgagtcgccaagcaactgctcaaagaacctgacaaccgctcgtcactggtg
ctgtggcgcggctacgctcatctggagtggatgctgggcaacatcgacgaggcccgcaaa
gtcttctccacggccacggccatggggggaggcaaagggctgcagagccccgccctctgt
gagctgtgtctgctgtgggcgcagctggaaatggaggacgggccaacagtgggaggggga
ggacttgtagacctcactgcgtccccagctgtgtgtgtgctaaccaggctagcagaggga
agctccgcctcctccgaccaggtcatctctccggtctccattctgaaagccaggaaatcg
tatgaacaggtgctgacaaccggcttgtcagcactcgaacaaaactaccagaccaacaaa
aaagcaggtatggaggacctgcttggagagaagcctaggctgaaaggcctgatgggatgc
cacgctctgttccagtacctcacaacgggcatcaaagccgctaatgctgtctacaatcag
gctagagacaggatgaaggagctgcaccagaagctgacccaggacaagcagcttaacagc
tctgaggatgtcgctagcaccgacgctaaccagtctgattccagcctctcctgcaggcag
tatgttagccggctagcttctgagtgtgaggctctggcagtgcaacaggcagcgttgctt
aggtaccacaacagtatcagtgtgtttcccctggcaacactgaggcagacactgacctcc
gccctctccacgtgggtcggcagtgcccctctctggggtttatatgtacaggtggagaac
cgttaccatagtgctggccgggcgcgacgcttcttccactctgtaaccagggataacagc
agtgtagtgccacgcctctttgccattgttgcggaacaacagaggaagcagctggttgac
gctgctcagaggtcttgttgccatgatgctgccttaccaatcctgccagagaatgggctc
agcaaccgtatccgtggactatttgaaagtgccatagcaacagagatggggtctcactgt
cctttactttggaggatgtacatgtacttcctggtttcagaagggaaggtggacaaagcc
actgggatcttctacaaggccttacagaatattccctgggctaagggcttgtacatggac
gcggcgcagctgttccccgagcatctgcaggagtttgtagatctgatgacagagaaagag
ctccgagttagactacctttggaagaactggatatactgctggaggactga
DBGET
integrated database retrieval system
