Pseudochaenichthys georgianus (South Georgia icefish): 117467960
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Entry
117467960 CDS
T09629
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117467960 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117467960 (capn3a)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117467960 (capn3a)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C2: calpain family
117467960 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
EF-hand_6
CAPN13-like_C_EFh
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
DHC_N2
Calpain_III
Motif
Other DBs
NCBI-GeneID:
117467960
NCBI-ProteinID:
XP_033967797
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Position
22:638772..665072
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AA seq
596 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNGQDFSVLRQECLQKKNLPLGFKELGHK
SNKVKNIVWKRPKEISENPQFIVGGASRTDICQGDLGDCWLLAAIACLTLYEKLLYRVVP
HEQSFSDGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNEFWSALLEKAYA
KLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERGSLMGCSIDSLV
PARFETRTVTGLVKGHAYSVTAVEECKPSQLKETKVRLVRLRNPWGQVEWNGPWSDNSKE
WTTLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDDKIHKWTVSVNE
GRWVRGCSAGGCRNYPGRLNLQEFRHLWNKIKQWQGIFKHYNADQFGSINSYEMRNAVND
AGFRLNNQLYDIITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQNGDGTIRLSVLE
MDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQFGSINSYEMRNAVNDAGFRLNNQLYDI
ITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQNGDGTIRLSVLEWLQLTMYA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacacaccgtcgggctttttctgcgaccggctgatccgggagcgagagcgcaga
gacggggaagggtctctgaacaaacccctgcgcttcaacggacaggacttcagcgtcctg
cgccaggagtgtctgcagaagaagaatcttcctctgggcttcaaggagctggggcacaag
tccaacaaggtcaagaacatcgtctggaagaggcccaaggagatctctgagaaccctcag
ttcatcgtgggaggagccagcaggacagacatctgccagggagatctgggtgactgctgg
ctgctggcggccatcgcctgcctgacgctgtacgagaagcttctctaccgagtggttcct
cacgagcagagcttctctgacggatatggaggcatcttccacttccagttctggcgttat
ggggactgggtggacgtggttatcgacgaccgcatcccgaccttcaacaaccagctggtc
ttcactaagtcagctgagaggaacgagttctggagcgcgctgctggagaaggcctacgcc
aagctgcacggctcctacgaggctctgaagggaggaaacaccacggaggccatggaggat
ttcaccgggggggtcactgagttctacgagatgaaggaggcgcccaaggagctctacaag
atcatgaagaaagctctggagaggggctcgctcatgggctgctccatcgactcgctggtt
cctgcgcgttttgagactcgtacggtgacgggactcgtgaagggccacgcctactctgtg
accgccgtggaggagtgcaagccgtctcagctgaaagagactaaggtgcgtctggtgcgt
ctcaggaacccctggggacaggtggagtggaacggaccctggagcgacaactcgaaggag
tggacgacgctctccaagacggagaaagagaagctgcagcatcagagcgcagaggacgga
gagttctggatgtctttcgaggacttcaagaagaactacactaagatcgagatctgtaac
ctgaccccggacgctctggaggacgataagatccacaagtggacggtgtcggtgaacgag
ggccgctgggtgaggggctgctcggccgggggctgcaggaactacccaggaagactcaac
ctgcaggagttcagacatctgtggaacaaaatcaaacagtggcagggaatctttaagcac
tataacgccgatcagttcggcagcatcaacagttacgagatgaggaacgctgtcaacgat
gcaggcttccgtctcaacaaccagctgtatgacatcatcaccatgcgctacgccaacgag
aacatgaacatcgacttcgacagtttcatcagctgtctggtgcgactcgaggccatgttc
agggcgttccaggccttcgatcagaacggagacggtaccattagactcagtgtcctggag
atggacgggacaggaagactcaacctgcaggagttcagacatctgtggaacaaaatcaaa
cagtggcagggaatctttaagcactataacgccgatcagttcggcagcatcaacagttac
gagatgaggaacgctgtcaacgatgcaggcttccgtctcaacaaccagctgtatgacatc
atcaccatgcgctacgccaacgagaacatgaacatcgacttcgacagtttcatcagctgt
ctggtgcgactcgaggccatgttcagggcgttccaggccttcgatcagaacggagacggt
accattagactcagtgtcctggagtggctccagctgaccatgtacgcctga
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