Pseudochaenichthys georgianus (South Georgia icefish): 117468067
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Entry
117468067 CDS
T09629
Symbol
nkx2.1
Name
(RefSeq) homeobox protein Nkx-2.1 isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117468067 (nkx2.1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117468067 (nkx2.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117468067
NCBI-ProteinID:
XP_033967917
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Position
22:4814598..4818267
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AA seq
344 aa
AA seq
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MSMSPKHTTPFSVSDILSPLEESYKKVSMENNNLGAPLTSYRQPQVSQAAMQQHHMGHNG
TMSAAYHMTAAGVSQLSHSAMGGYCNGNMGDLPSYQDGMRGSTTATGWYGGNPDPRFSSI
SRFMGSSSGMNMGSMGSLGSLADVGKGMGSLSSTPRRKRRVLFSQAQVYELERRFKQQKY
LSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQQMQQDGGSCQQQQQSPRR
VAVPVLVKDGKPCQGSGHTPTSSTGTLHQQGGNNVMIMSNNSSGLGQHQSQQVGSTGHSP
DLAPHSSSPPSLQSQVSGLSHLNPPGAEYGSALQCSALLYGRTW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccctaagcatacgactcctttttctgtttccgatatcttgagtcccctt
gaggagagctataagaaagtaagtatggagaataacaacttgggggcacctctcacttct
taccggcagccgcaggtctctcaggcggcgatgcagcagcaccacatgggccataatggg
actatgtctgcggcttaccacatgactgcggcaggtgtttcccagctgtcacactcggcc
atggggggctactgtaacggcaacatgggcgacctgccgtcgtaccaggacggcatgagg
ggcagcaccacggccaccggctggtatggaggcaacccagaccctcgcttctcctccatt
tctcgcttcatgggctcgtcctcgggcatgaacatgggcagcatgggcagcctcggctcg
ctggcagatgtgggtaaaggtatgggctccctgtccagcaccccgaggagaaagagacgc
gtcctgttctcccaggcgcaggtctacgagctggagcggcgcttcaagcagcaaaagtac
ctgtctgcgccggagagggaacacctggcaagtatgatccacctcaccccgacccaggtg
aagatctggtttcagaaccaccggtacaagatgaagaggcaggctaaggacaaagtgtcc
cagcagcagatgcagcaggacggcggctcgtgccagcagcagcagcagtccccgcggagg
gtggccgtgccggtgctggtgaaggatgggaagccgtgccaaggcagcggccacacgccc
acatcctccacggggaccctgcatcagcaagggggcaacaatgtcatgatcatgtccaac
aactcgtccggcctcgggcagcaccagagccagcaggtgggcagcacgggccactctccg
gacctcgcgccacactcctccagccccccctccctgcagagccaggtgtccggcctctcc
cacctcaacccccccggcgcagagtacggctcggccctgcagtgctcggccctgctttac
ggcaggacgtggtga
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