Pseudochaenichthys georgianus (South Georgia icefish): 117468157
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Entry
117468157 CDS
T09629
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117468157 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117468157 (mlh3)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117468157 (mlh3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117468157
NCBI-ProteinID:
XP_033968055
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Position
22:16478505..16486277
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AA seq
1196 aa
AA seq
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MNTMIKCLPKEVQGKLRSGVALPSLQQCVEELILNSIDAEATCVGVRMDMEAFKVQVIDN
GAGINSENMDSLGNRYCTSKCSSVEDLDSLKWYGFRGEALASIVSLSTLVEISSRTRATV
KTHVKIFKDGKSMDVFEGETARPAAGTTVVVCNFLHNMPVRRKRMDAVLEGERIRHRVEA
ISLTHPSVSFTLKNDCTGAMMVQLPKARNTYHRFVQIHSLGRAQKLGEISYTHGQFEVIG
YIGREGHYSNSLQFLYVNERLLLKTRIHKLLNFLLRRLSNSNQKNDSPDMQSAVRSPKTK
RSQDPHGVYVINMKCSYSEYDICLEPAKTLIEFKDWDGVLLCIEEAVKAFLRRENLVAVL
SQDVFDKAPAELCGTRITVEEGHNTGNVGQATSSASILDCSIGMKLASDSVHRKRQDDCV
CEEDVSRESGQVEGKEETEQQRKEKITAKQLESEESINKDVRCEPSCDLARLNPTSDIKN
NVEEESSEAGEGSDVFCKPSSVVQLEGEKLELSKENDMLINNTDSNGNETLLDCFAQQIQ
PDMNYIEQILPDCPGTGGHHHTLVSDRKISLSDPYIHENLLTQDMSQMNKSVFQQTSVQI
CEERCVALKRRISLEARQDRTGQKQDFTHIIPSKIPRISTSQKLSLCKESGSLERFRRVY
GKSDELKLPSQDNTNRCSQPDGFVMHSQNNLLCQKDQQHGGVAKVEKEKEKTNSPLTLSA
FTKLKPASVQNRGKTSLASKLFQLKHHSKVLPQDKCLSTGNDDPQEGNNNEHHCDTALNP
EALPVCSTHPLAAEGEEASGDWLHHYEASVGKTVYVNKVTGLSRYDDLPPEETTVRCTSD
VTNMAVSVINKMGMEYRCYPFQMELVLPFLPKSRTERVLSSGLDDRDANVESSNSLTTLY
SKWKNPVFVRPPTVGVDVTSGQAVGLAVKIHNILFPYRFSKAMIHSMKVIHQVDKKFLAC
LINTREEEPAAMTETEGNLLVLVDQHAAHERVRLENLVADSYEEDPDAPGQKRLCSSTIL
PPLEITVTEEELRLLRSCQGHLRSLGLEVKFSQAAVFVFVGKVPLCFMEKESNELRRGRP
SVIKTIVEEYLREQIELLRSTGTVRGTLPLTVLKVLASLACHGAIKFNDSLSRDECHSLV
ASLSSCQLPFQCAHGRPSIAPLVDTLHLDKDEQELQKPNLQKLRRMYKAWQLYGNR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaatgataaagtgtttgcctaaagaggttcaggggaaacttcgctccggtgtc
gctctgccctcacttcagcagtgtgtggaggagctcatcctgaacagcatcgatgccgaa
gctacctgtgtgggagtcaggatggacatggaggcgtttaaagttcaggtgattgacaat
ggcgctgggataaactccgagaatatggattccctgggaaatcgatattgcacaagcaaa
tgcagctctgttgaagacctggacagcctcaagtggtatggtttcagaggagaagccctg
gcaagtatagtttctctctccacacttgttgaaatctcttcccggaccagagcaacagtg
aaaactcacgtcaaaatcttcaaagatggcaaaagcatggacgtgtttgaaggagagact
gctcgacccgctgcagggacaactgttgtcgtttgtaacttcctccacaacatgcctgtg
cggaggaagaggatggatgctgttctggagggtgagaggatcagacacagggtggaggct
atttctctgacgcacccctcagtgtctttcaccctgaagaatgactgcacaggggccatg
atggtgcagcttcctaaagctagaaacacctaccacaggtttgttcagatccacagcctt
gggagagcacagaaacttggagaaatcagctacacacacggacagtttgaagtgattggt
tatattggcagagagggccactacagcaacagtttacagttcctgtatgtaaacgagagg
ctgctcctcaaaacacggatacacaagctccttaattttctcctacgcagactgagcaat
tcaaaccaaaaaaacgacagtccagatatgcagtcagccgtgagaagtccaaagaccaaa
cggagccaagacccccatggagtgtacgtcatcaatatgaaatgctcttactcagagtac
gacatatgccttgagcctgctaaaactctaatagagttcaaagattgggatggcgttttg
ctgtgcatagaagaagcagtgaaagctttcctgagaagggagaacttggtggccgtgctt
tctcaagatgtcttcgacaaagcacctgctgaattgtgtggcactcgcattacagttgaa
gaggggcataacactggcaatgttggccaagcaacaagcagtgcttccatactagattgc
agtattggaatgaaactggcatctgattctgtccatcgaaagcgccaagatgactgtgta
tgtgaggaagatgttagcagggagtctggtcaggtggagggcaaagaagagactgaacaa
caaaggaaggaaaagataacagcaaagcagttggaaagtgaagagagcataaataaagat
gttagatgtgagccatcatgtgatctagctagactcaaccctacatctgatattaagaat
aatgtagaagaggagtccagtgaagctggtgaaggctctgacgttttttgtaagccaagt
tcagtcgtacagctagagggtgaaaagctggaactctcaaaagaaaatgacatgttgata
aacaatacagactcaaacggcaatgagactttactagactgcttcgctcaacaaattcag
cctgacatgaactatattgagcaaatattacctgactgcccgggtacaggaggacatcat
cacactttagtaagcgacagaaagatcagtctgtccgatccatatatccatgagaatctg
ctgactcaggacatgtcacaaatgaacaagtcagtgtttcagcaaacatctgtgcagata
tgtgaagagagatgtgttgcattaaaacgcagaatctcactggaagcaaggcaggacaga
actggtcagaaacaagacttcactcatatcattccctcaaagattcccaggatttcaacg
tctcaaaagttgtctttatgcaaggagtctggatcgcttgaaagattcagaagagtgtat
ggtaaatctgatgaactgaagttaccctctcaggacaatacaaatagatgttctcagcca
gacggatttgtcatgcattcgcagaacaatttgctttgccagaaagatcagcaacatggt
ggggttgcaaaagtggaaaaagaaaaagagaaaaccaacagccccctaacactctcagcc
ttcaccaagttaaaaccagcctcagtgcagaatagaggcaaaacatctttggcatctaaa
ctcttccaattgaaacaccattcaaaagtattaccgcaggacaagtgtctcagcactggt
aacgatgacccccaagaaggcaataacaacgagcatcactgtgacaccgctctgaaccct
gaggcgctcccggtttgcagtacacatcctctggcggctgagggggaagaggcctcaggt
gactggctccatcactacgaagcatctgtgggaaagacggtgtacgtcaacaaagtgacc
gggctcagtcgatatgacgacctgcctcctgaagaaacaacagtgcgctgtacgtctgat
gtcaccaacatggccgttagtgtcatcaataaaatggggatggagtacagatgttaccct
tttcagatggaactagtgttgcccttcctacctaaatccaggacggagagagtgcttagt
tcagggcttgatgacagagatgccaatgtcgagagctccaactcactgacgacgttgtac
tcaaaatggaaaaatcctgtgttcgttcgccctcctacggttggtgtggacgttacgagc
ggacaagctgtggggctggctgtgaagatccacaacatcctgttcccttaccgcttctct
aaggccatgattcactcaatgaaggttattcatcaagtggataagaagtttcttgcatgt
cttatcaatacgagagaggaggagcctgcagccatgactgaaactgaaggaaaccttttg
gtgctggtggatcaacacgctgcacacgagagagttcgacttgaaaatctagttgcagat
tcatatgaggaggacccagatgcaccggggcagaaacgtctgtgttcatcaactattctg
cctcctctcgagatcactgtaacagaagaagagctcaggctgctcagatcatgtcaggga
catttgcggagtctgggcctggaagtgaagttctcacaggcagcggtgtttgtgtttgtt
gggaaggtaccactttgcttcatggaaaaggagagtaatgagctcaggcgggggagacca
tctgttatcaagactattgttgaggagtatctacgagagcaaattgagttactccgctcc
accggtacagtgagaggaactctgcctctcactgtgctgaaggtgctagcctccctagca
tgccatggtgccatcaaattcaatgacagcctgagtagagatgaatgccacagtctggtg
gcctccttgtcctcctgccagctgcccttccagtgtgcccacggccgtccatccattgct
cccttagtggacaccctccatttggacaaagatgaacaggaattacagaaacccaacctc
caaaagctgagaagaatgtataaagcatggcaactttatggaaatagataa
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