Pseudochaenichthys georgianus (South Georgia icefish): 117468268
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Entry
117468268 CDS
T09629
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
117468268
NCBI-ProteinID:
XP_033968183
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All DBs
Position
23:9057248..9275307
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AA seq
911 aa
AA seq
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MASVSAPAQAAAAPAASLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGAMAR
RAAQAQPDSKDTPDEPYAFQAREFLRKKLIGKEVCFTVEIKTALGREYGIVYLGRDTTGE
NLADSLVNEGLATVRREGIRGNNPDQARLCELEDQSRASKKGLWSEGGGTQSVRDLKYTI
ENPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTEF
TESFAAEAKFFTESRLLQRDVQIILESCPNQIILGTIMHPNGNITELLLNEGFARCVDWS
MAVYTQGADKLRSAEKSAKERKVRIWKDYVAPTANMDQKDRQFVAKVMQVLNADAMVVKL
NSGELKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKIIGKKVNVTV
DYIRAATGPGESTPAFSERTCATVTIGGINIAEALVSKGLATCIRYRQDDDQRSSHYDEL
LAAEARAIKNGKGLHSKKEAPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRSSRNMPGGTQVAEPFSEEAMLFTKELVLQREVEVEVE
SMDKAGNFIGWLHIEGLNLSIALVEGALSKIHFTAERSNYYKTLVSAEEACRERKEKIWA
NYEEKPVEEVVYVTEEKERVANYRPVFVTEICDTMHFYTQDVETGSQLESLMETMRAEIA
AQPPVEGSYAPRRGDYCIAKFADDEWYRARVEKVESPAKVHVFYIDYGNREVVSSTRLAA
IPPAFSTRTLPAQATEHALAYIQVPLDEDVRADVVDCVVRDIQNSQCLMNVEYSGANCPH
VTIQFGDTKDDVGLGLVKEGMVMVDVRKEKHLKKMVTEYLNCQESAKSARLNIWRYGDFR
ADDADEFGYRR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggcaccagctcaggctgcagcagctccggctgcttccctgcaaaga
ggaattgtgaaaatggtcttgtcgggctgtgccatcattgttcggggtcagcctcgaggt
ggcccccccccggagcgtcagatcaatctcagtaatatccgagcgggggccatggcccgt
cgagctgctcaggcccagcccgacagcaaggacacccccgatgagccttatgcctttcaa
gccagagagttcctgcggaagaagcttatcggcaaagaagtgtgcttcactgtggaaatc
aagaccgctttgggcagggagtacggcatagtctacctggggcgagacacaactggcgag
aaccttgctgacagtctggtgaacgagggtcttgccacagtccgcagggaaggaatcaga
gggaacaatccagaccaggccagactctgtgaattggaggaccagtccagggcttctaag
aagggcttgtggagcgagggcggcggcactcaatctgttcgagacctcaaatacaccata
gagaatccccgcaactttgttgactccttgcaccagaaacctatcaacgccatcatcgag
catgtgcgtgacggcagcgttgttcgtgccttgctgctccccgactactacctggtcacc
gtcatgctgtctggagttaagtgtcccacattcaagcgggaagcggatggtacggagttt
acagagtcatttgcagcagaagccaaattcttcaccgaatcccgacttctgcagagagac
gttcagatcatcctggagagctgccccaaccagatcatactgggcaccattatgcacccg
aatggaaacattacagaactcctactgaatgaagggtttgcccgctgtgtggactggtcc
atggccgtctacacccagggagccgataaactacgttctgctgaaaaatctgctaaagag
cgcaaggtccgcatctggaaggactacgtggcacccacagccaacatggaccagaaggac
aggcagtttgtcgccaaggtgatgcaggtgctcaacgctgatgccatggtggtgaagctc
aactctggagaactcaagaccatccacctgtccagcattcggccccccagaattgaggga
gaggagaagaacaaggacaaagacaaacgtttccgtccgctctacgacatcccctacatg
ttcgaggcccgggagttcctgaggaagaagatcattggtaaaaaggtcaatgtgacagtt
gattacatcagagcagctaccggcccaggagaaagcacccccgcattctcagaacgcacc
tgtgctacagtcactattggcggcattaacatagccgaggctctggtcagtaaaggcctg
gccacatgcatcagatacaggcaggatgacgaccagcgctcctcccactacgacgagctg
cttgccgcagaggctcgggccatcaagaatgggaaagggctgcacagcaagaaggaggct
cccatccacagagtggctgatatctctggggatacacagaaagccaagcagttcctgccc
ttcctgcagagggccggccgctcagaagctgtggtagagtacgtgttcagcggctcccgc
ctcaagctgtacatgcccaaagaaacctgcctcatcaccttcctccttgccggtatcgaa
tgtccacgcagttccaggaatatgcccggggggacgcaggtggctgaacccttcagtgaa
gaagccatgctgttcaccaaagagctggtgctgcagagagaggtggaagttgaagtggag
agcatggacaaagccggaaacttcattggctggctgcacatcgagggtttgaatctgtca
attgcactggtagaaggcgctctgtccaagattcacttcacagccgagcgcagcaactac
tacaaaaccctggtctcagcagaggaggcctgcagagagaggaaagagaagatctgggcc
aattacgaggagaaaccagtggaggaggttgtgtatgtaacagaagaaaaagaacgagtg
gccaactacagaccagtatttgtcacggaaatctgcgacaccatgcacttctacacccag
gacgtagagacggggagccagttggagagtctgatggagaccatgagagcagagattgcc
gcccagccgcccgtggaggggtcctacgccccgcgccggggggattactgcatagccaag
tttgctgatgacgagtggtacagagccagagtggagaaagttgagtcaccggcaaaggtt
catgtcttctacattgactacggcaacagagaagttgtgtcatccactcgtctggctgcc
atcccccccgccttcagcacccggaccctgcccgcacaggccaccgagcacgccctcgcc
tacatccaggtcccgttggacgaggatgtccgtgcggacgtggtggactgcgttgtgcgg
gacatccaaaacagccagtgcctgatgaacgtggagtactcgggtgccaactgcccgcat
gtcaccatacagttcggagacactaaggacgatgtgggcctgggcctggtcaaggagggc
atggtcatggtggacgtccgcaaggagaagcacctgaagaagatggtgacagagtatctg
aactgtcaagaatctgccaagagtgccaggctcaacatttggcgctacggggacttccgt
gcggacgatgccgatgagttcgggtacaggcgttaa
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