Pseudochaenichthys georgianus (South Georgia icefish): 117468295
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Entry
117468295 CDS
T09629
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117468295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117468295
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNARE associated proteins
Others
117468295
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117468295
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117468295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
117468295
NCBI-ProteinID:
XP_033968225
LinkDB
All DBs
Position
23:complement(17849943..17869532)
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AA seq
435 aa
AA seq
DB search
MAEDGRDESVAADDDSQHTAEDGRNGINNTMVEESPTLLRRMEICVAEAEKRSGKNAVNM
QETFTVYLIETRPMDALAEGRNPAPDSLWRRYSEFELLRNYLLVSFPYIVVPPLPEKRAE
FVWHKLSADNMDPDFVERRRVGLENFLLRVASHPVLSNDKILHHFLTEEHSWKEVVYETG
FQAKADSRLKALSATFRVRNPDKRFMDMKHYSDELQSHTSQLLRARARVADRLYGVYKVH
GNYGRVFSEWSAIEREMGDGLQSAGHHMDAYAASIDDILEEEEHYADQLKEYLFYAEALR
AVCRKHELTQFELEMATQDLISKKQQHEELSTGIVRTFSFKGMTNKLFGQEAPEQREARL
KLLEELIEEGEEAVKDKTVECEEHVEKAWVDVQRFKEQKDKDLREALINYAVMQVSMCKK
GIQMWSNAKECFLKM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatgggagggatgagtctgtagcggctgacgacgactcacaacacacagct
gaagatgggagaaacggcataaacaacacgatggtggaagagagccccactctcctgcgc
aggatggagatctgtgttgccgaggctgagaaaaggagtgggaaaaatgcagtgaacatg
caggagacgtttaccgtctaccttattgaaacacggccaatggatgctctcgctgaaggt
cgtaacccagcccccgactctctgtggaggagatacagtgaatttgagctgctgcggaac
tacctgttagttagctttccatacatcgtggtccctcctctgcccgagaagagggcagag
tttgtgtggcacaagctgtcggcagacaacatggacccagactttgtggagcgccgtcgg
gtggggctggagaacttcctgctgcgtgtggcatcacatccggtcctctccaatgacaag
atcctccaccacttcctcaccgaggaacatagctggaaggaagtggtgtatgagacggga
tttcaggcaaaggcagattccaggctgaaagctctcagcgccaccttcagggtgagaaac
ccagataaacgcttcatggacatgaaacactacagtgatgagctgcagtctcacacatct
cagctgctccgggcacgagctagggttgcagatcgactctacggcgtctacaaggtccac
gggaactatgggagggtcttcagtgagtggagcgccatagagagagagatgggggatgga
ctgcagagtgccggtcatcatatggatgcatatgctgcctcaatagatgatatcttagaa
gaagaggaacattacgcagaccaactgaaagaatatctcttctatgctgaagctctgagg
gcagtgtgcaggaaacatgagctgacccagtttgagctcgagatggccacacaggacctg
atatcgaagaagcagcagcatgaggagctctctacagggattgttcggacattctccttc
aaaggcatgaccaacaagctttttggccaagaggcacccgagcagagggaggccagactg
aagctgctggaggagctgatagaggagggggaggaggcggtcaaggacaaaacagtcgag
tgcgaagaacatgttgagaaggcatgggtggatgtacagcgcttcaaggagcagaaagac
aaagatctgcgggaggcgctcatcaactacgctgtcatgcaagtcagcatgtgcaaaaag
ggaatacaaatgtggagcaatgccaaagaatgtttcctaaagatgtaa
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