Pseudochaenichthys georgianus (South Georgia icefish): 117468326
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Entry
117468326 CDS
T09629
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117468326 (utp20)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117468326 (utp20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Cytomega_UL84
Motif
Other DBs
NCBI-GeneID:
117468326
NCBI-ProteinID:
XP_033968278
LinkDB
All DBs
Position
23:complement(18205660..18227532)
Genome browser
AA seq
2810 aa
AA seq
DB search
MKIKSKSSYHKSENTYKFLTFAERLANVNIDVIHRIDRTGSYAEEVETYFSEGLTKWRDL
NLTEHFSAFLKEVSNQSQSFNLLVFHQKTIVESLKTHLAVKNSLASEPLLDLVVQLARDL
QTDFYPHFPDFFVLIASVLETKDTEVLEWAFSCLSYLYKYLWRLMVKDMTKIYSLYSTLL
EHKKEHIRKFAAESFSFLMRKVPDLDGLLNHVFSDLQQHPDKAEGAGQLLFEMCKSVRNL
FHSCSEKAFPVALRKLGPSTCPDATLPWDTVRDALDHMVHAAANHVEREHFLVLWESLQA
SVVEVLGVMEAKGEKAEQATEQLERLLFIFQTLVSHKNGAKVTKPDSVCQTVLRLVQSSS
LSPSCSRLLLQITSSLLLGENISLPRVLIQETVQKVFGSTIEQDLILEFTKEMFTMKQFE
QLFLPSMLRFTAELLCCDDPRSRHCGLDALVSLILAKAPPPTDGSMAFETYPLLFNGQTG
VLSGEESAVPELVLSLIRFPEEQKQPITDLSLPWAALMLLPHLRPIAPASVVPAVTAFLN
RLLTEIETEALGKAGLFVASQAMSCLLTLDGSAQLLSLVTVDKINSILRKFPSDLSALLL
GDLYYTRLSLSGVSEHLSHSALQELHQILCANLSSNITKIRLLTLRILSQFEAELPPQAE
GEESVEVQPVFAVCLQAELVPASVQDYREKLLHLRKLRHDLVQRSLPQGPPGSFQQVPLR
YLIAMLFVNFKPLWEAVIELLVTHARGMDNRDFWKVYYENLEMVAGIAEKELHEDSEDDE
EEEETGVQAEPGCDVIESGDVGVLFLEQLKLTANPDERTDFLNFRILLWRCMTEFPERVE
PRCRELCPLLLRFIRNEFYTSDLLVAPTQDLRKVDDAAQDESGMAVEEEEDEDEQEAEEG
GRQQKKAPPKRAAAKQLIVHLKVFAKFTNPRSLYLESSLSDLYNQLLCHQDQQIQRVALE
CVLTYKDANIVPYKENLERLLDDKHFKEEIVHFNISESGVVDASHRARLIPLLMRILFGR
MRSKAGSKFQGKASSASRSSIILRFLAGCQAEELGIFIDLLLEPVCHYSQGTCLAAVEKA
IADTDVAAVLPLGRQHSLLNIINVVIQKLGHLINIYLPKVLQILLCVTASVSTILDKRLQ
LRAGCISPLKNLRRLGVLRIQDFLDGFDSYSFSADELDAVFAAVVWPQVCRLSTESPYSP
TPLLRLIHVWCKNARYYPLLAKQRLNHPECDILLNVFALLSAKKVSTVTIAMVMDIAESL
ATTQDFVASEDETELNVNNCVFPQPKEGALITADALTQGSSLLLPHISTLLNYLSGVVRN
SDRLKKKKFRVQVAKELNILSKVSRFVSDKEQSSVLITLLLPYLHKGHNPEETEIDTLAT
LQNLLRQCVQPSDFLRPLSKLFSVIQNKLPRMALTNVFQTLSDLEPSLKYITDLATKLNA
FDSRHLDEIHFDVRLCAFQDATRRVKEMTTLDLDYIGTIMHNVFHTFEIGDMSLGDNANL
CLSAVITQLAEIGAGEQLYKDIVQHTILDAVHKGLRSKTDSVQHEYTTVLACLVKTFPTK
KEFKDLVQLTNYHDLESDFFEHMKHIQIHRRGRALRKFAKQLTEGQVVLTPRSLQHYIMP
YAMTALLDEKMQKHEGMITASVEVVGAVCRRLTWSKYLYYLKHFIHVLQTSQVEQKLAVS
LLLTVLDAFHFDHQTLSREMEAAKAREDVSAAMEADDEEQAAADESDDDEEAMEVEGKTD
PSDVPMETDTNSGENGVASKKAATPVAKVPALAAPPMAVSSGLPQSTEELGTLISAIHQT
VTNSVLPRLHKCLNAKIKRDDEHKAVKSKDVKDEEVARIPIAFAMVKLMQTLPPAIMEVN
LPGILIKVCVVLRNRFQEVRDVARGTLVKIIETLGFRYLQYLLKEMQGLLAKGYQVHVLT
FTVYQLLTVLSPTLKSGDLDSCMNMLIDIFNNELFGPVAEEKDVKGIVSKLMEARHSKSM
DSYELLARYCSKESVTKFIMPLKEMLDNSASLKVCIRVGAVLRRMVLGLLVNDGMTSQDI
LLLCHGLVSQSLPLLTKRDREKSSVKPPPDPRLPPLSCLLLLPTPTRGGRKAPVSSRTNM
HILVDTGLKLLHLSLKKSKVTSSDPTVLPMLDPFVLLLLDCLDSRHVKVITEALVAFTWL
LKFPLPAVEQNADQMTKQLFVLLKDYSKAGAARGENYQLVQNCFKAITILVKNVKSNQIS
ETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPEMEELMTKVAKLSVTGNNGGI
RIHCRQIYLKYLLDYPLGKKLRGHLDFVVAQLHYEHDTGRESVLEMLAYIFQTFPKELLL
RHCGLFFAPLALVVVNDDSARCKKMAAMAIKALLAQLDINHQNTMYSFVNTWLHAEKASM
RRLGAQICGLFVEVEEEQFTRRLDDLLPLLEKEINPVNYDDIEEEQDEKGADRLLYSFLT
LITKLSKHCSLLELRQPHDTLTLIWGHIEAHLRYPHCWVWLTSSQLFGQLFAAHPAEQLV
AGWRGEGGDASPQSPTTAFITRGLDKKMRELALSFCHQLQSKFLDTASGEQVIKNLLFVG
KVIYLVSPESDVTPAQEEVKEEEKTEEEKEGEVEEKKEEDENDKEKEDEEEDEEDDKDDR
PPSLLWLMKKLSLMAKREAAHTPKVPLKRTCVFKFLGAIAMDLGKERLGPYLSTIITPLY
RELDSTYADQDPTLKNLAQELIELLKRHVGLEKFSLAFSGVQKEFSQRRAARKKHRAIQA
VANPDIAAKKKLKKHRNKIEAKKRKIEFLRPGYKAKRQRGNTLKNLAMVQ
NT seq
8433 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaatccaagtcttcgtatcacaaatctgagaatacctacaagtttctcact
tttgctgaaagacttgccaatgtcaacattgacgtcatccatcgtattgacaggactgga
tcgtatgcagaggaagtagaaacatatttctctgaaggactgacaaaatggagagacctc
aacttgacagagcatttcagtgcatttttgaaagaggtttccaaccagagccagtcattc
aacctgttggttttccatcagaagacaatagtggagagtctgaaaacacacttggctgtc
aagaacagtctggcctcagaaccactgctggacctggtggtgcagctggccagagacctg
cagactgacttctacccccacttccctgacttcttcgttctgatcgcctccgttctggaa
accaaggacacagaagtcttggagtgggctttcagctgtctctcttacctctacaagtac
ctatggaggctaatggtgaaggacatgaccaaaatctacagtttatacagcacactgctg
gagcacaagaaagaacacatccgcaaatttgcagccgagagcttctcttttttgatgaga
aaggttccagatctcgatggtctgctgaatcatgttttctcagacctccagcagcacccc
gacaaggcggagggagcagggcaactgctgttcgaaatgtgcaaaagcgtcagaaacctg
tttcactcgtgctctgaaaaggctttccctgtagctttgcgtaagctcggaccctcgacc
tgcccagacgccaccctgccgtgggacacagtcagggacgctctggatcacatggtccac
gctgctgcaaatcacgttgagagagaacacttcctggtcttgtgggagtctttacaggcc
agtgtggtggaggtcctgggtgttatggaggcgaaaggagaaaaggcggagcaggcaaca
gagcagctggagaggctgctgttcattttccaaaccctggtgtcccacaagaacggagcc
aaggttaccaagccggattccgtctgccagacggtgttgcggctggtgcagagctcctct
ctctcgccttcttgttcccgtctgctcctccagatcacctcctctctgctcctcggggag
aacatctctctgcccagagttctcatccaggagacggtccagaaggtgtttggcagcaca
attgaacaagatctgatcctggagttcaccaaggagatgttcaccatgaaacagtttgaa
cagctcttccttcccagcatgctgcgcttcactgctgagttgttgtgctgtgatgatcct
cgctctcgccactgtggcctggacgcgctggtcagtctgatcctggccaaagcccctccc
cccacagacggctccatggccttcgaaacatacccactgctcttcaatggacagaccgga
gtgttgagcggtgaggagtctgcggtgccggagctggtgctgtcgctgatccgattcccc
gaggagcagaagcagccaatcactgacctgtctctgccctgggccgccctgatgcttctg
cctcacctcaggcccattgctccagctagtgtggtcccagctgtgactgctttcttaaac
cgcctcctgactgagattgagacggaggcactggggaaagctggtctgtttgtagccagt
caggcgatgagctgcctcctcaccctggacggctctgcacagcttctctccctggtcact
gtggacaagatcaactcaatcctacggaagtttcccagtgacctgtccgccctgctgcta
ggagacctgtactacacccgcctgtcactcagcggcgtttcagagcacctttcccacagt
gcactgcaggagctccaccagatactgtgcgccaacctctcctccaacatcaccaagatc
cgcctgctgacgctgaggattctctctcagtttgaggcagagctccccccacaggccgag
ggtgaggagagtgtggaggtgcagccggtgttcgctgtgtgcctgcaggcggagctggtg
ccggcttcagtgcaggactacagggagaagctgctccacctgaggaagctcagacacgac
ctggtgcagcgcagcctgcctcagggcccgcccggcagcttccagcaggtgcctctgcgt
tacctcatcgcaatgctgttcgtcaacttcaagcccctgtgggaggcagtcattgaactt
ctagtgacccatgccagagggatggacaacagggacttctggaaggtctactatgaaaac
ctggagatggtggcagggatcgctgaaaaagaactgcacgaggacagcgaggacgatgag
gaggaagaggagacgggtgttcaggccgagccaggatgtgacgtcattgagagcggggac
gtgggggtgctgttcctagagcagctgaagttgaccgccaaccccgacgagaggacggac
ttcctcaacttccgcatcctgctgtggcgctgcatgacggagtttcctgagagagtggag
ccccgctgccgggaactgtgccccctgctgctccgcttcatcaggaatgaattttacacc
tccgacctgctggtggcacccactcaggacctgaggaaggtagatgacgctgcccaggat
gagtctgggatggctgtggaggaagaggaggacgaagatgagcaggaggcagaggaagga
ggcagacaacagaagaaggctcctccaaagagggccgctgcaaaacagctgatcgtccat
ctgaaggtgttcgccaaattcaccaaccctcgctctctctacctggagagcagcctcagt
gatctctataaccagttgctctgccaccaggaccagcagatccagcgagtggctctggaa
tgtgttctcacatacaaggacgccaacatagtaccatacaaggaaaatctggaaaggcta
cttgacgacaaacacttcaaagaggagattgtccatttcaacatttctgagtcaggagtg
gtggatgcctcacacagagccaggctcatcccactgctcatgaggatcctgtttggccgc
atgcgcagtaaagcaggcagtaagttccaggggaaggcgagctccgcctcccgctcctcc
atcatcctgcgcttcctggctggctgccaagcggaggagctggggatcttcatcgacctg
ctgctggagcccgtctgccattacagccaaggtacctgcctggctgcggtggagaaagcc
atcgctgacacagatgtggctgccgtcctgcctctgggccgacagcacagccttctgaac
atcatcaacgtagtgatccagaaactgggtcacctgatcaacatctacctgcccaaagtg
ctgcagatcctgctgtgtgtcaccgcctctgtgtccaccatcctggacaaaaggctgcag
ctgcgtgcggggtgcatcagtcctctgaagaacctgaggcgcctcggcgtcctgaggatc
caagactttttggacggcttcgactcctacagcttcagcgcagacgagctggatgccgtc
tttgccgctgtggtctggcctcaggtgtgtcgtctctctacagagagcccctactccccc
acccctctgctgagactcatccatgtgtggtgcaaaaatgccaggtactacccacttctg
gctaagcagaggctgaaccatccggagtgtgacatcctcctcaacgtcttcgccctcctc
tcggccaaaaaagtttccacagtgaccatcgccatggttatggacatagccgagtcctta
gcaaccactcaagactttgtggcctcggaggatgagacggagctcaacgtcaacaactgt
gtgttcccgcagcctaaagagggcgctctcatcacagcagacgctctaacccagggctcc
agcctgctgctgcctcacatatccaccctgctgaactacctcagcggagtcgtacgcaac
tctgaccgactgaagaagaagaagttcagggttcaggtcgccaaagagctcaacatcctc
tccaaggtcagtcggtttgtcagcgacaaggagcagagctcggtgctcatcaccctgttg
ctgccctacctccacaaaggccacaatcctgaggagacagagatcgacaccctggccacg
ctgcagaacctcctgcggcagtgtgtgcagccctcagacttcctgcggccgctcagcaag
ctcttctccgtcatccagaacaagctgcccagaatggccctcactaacgtcttccagact
ctctcggatttggagccctcactcaagtacatcactgatttagcaacaaagctgaatgcg
ttcgacagtcggcacttggacgagatccacttcgacgtgcgtctctgcgctttccaagac
gccaccaggcgagtcaaagaaatgacgactctggacctggactacatcggcaccatcatg
cacaacgtcttccacacctttgaaatcggtgacatgtcgctgggagacaacgccaacctg
tgtctgtctgcagtcatcacgcagctggcggagatcggcgctggagagcagctctacaag
gacatcgtgcaacacaccatcctggacgccgtgcacaaggggctccgcagcaagacagac
agcgtgcagcatgaatacaccaccgtgctggcctgcctggtgaagacctttcccaccaag
aaagagttcaaagacctggtgcagctcaccaactaccacgacctggagtctgacttcttc
gagcacatgaagcacatccagatccaccgccggggtcgtgccctgaggaagttcgccaag
cagctgacggagggccaggtggtgctgacgccccgctctctccagcattacatcatgccg
tacgccatgaccgccctgctggatgagaaaatgcaaaagcatgagggcatgataacggcg
tcggtggaggtggtgggcgcagtatgccgcaggctgacgtggtctaagtacctctactac
ctgaaacacttcatccacgtcctgcaaacatcgcaggtggagcagaagctggctgtcagt
ttgctcctcacagtcctggatgctttccattttgaccatcagaccctcagcagagaaatg
gaggctgccaaggccagagaggatgtgagtgcggcaatggaggccgatgacgaggagcaa
gctgcagccgacgaatcggatgatgatgaggaggcaatggaggtagagggcaaaaccgat
ccatctgatgtccccatggaaacggacaccaacagtggagaaaatggtgtcgcctccaag
aaggcagctacccctgtagccaaggtgccggccttggctgccccccccatggcggtgtcc
agcgggctgccgcagagcaccgaggagctggggactctgatcagcgccatccaccagacc
gtgactaacagcgtgctgccccgcctgcacaagtgtctcaatgcaaagatcaagcgtgac
gatgagcacaaggcagtgaagtcgaaggatgtaaaggatgaggaagtggccagaataccg
atcgccttcgccatggtcaaactgatgcagacgctgccaccagccatcatggaggtcaac
ctgcctggcatcctgatcaaggtgtgtgtggtgctgaggaaccgcttccaggaggtccgt
gacgtggcgaggggaactctggtgaagatcatagagactttaggcttccgctacctgcag
tacctgctcaaagagatgcaggggctcctggctaaaggctaccaggttcacgtgctaaca
ttcacagtttaccagctgctgacagtcctcagtccaaccctgaagagcggagacctggac
tcctgcatgaacatgctcatcgacatcttcaacaacgagctgttcgggcctgtggccgag
gagaaggacgtgaaggggatcgtctccaagctgatggaggcgcgacacagcaaaagcatg
gactcctacgagctgctggctcgctactgcagcaaagagagcgtcaccaagttcataatg
ccactaaaggagatgctggataactcagccagtctgaaggtgtgtatccgggtgggggcc
gtgctgcggaggatggtcctgggtctgctcgtcaacgatggcatgacgtctcaggatatc
ttgctgctgtgccacggcctggtcagccagagtctgccgctgctcaccaagagagaccga
gagaaatcctcagtgaagccccccccagaccccaggctgccccctctcagctgcctgctc
ctgcttccaactccaacgaggggggggcggaaggctccagtcagcagccgcaccaacatg
cacatcctggtggacaccggcctcaagctgctccacctgagtctaaagaaatccaaagtg
acgtcctccgatcccacggttctgccgatgctggatcctttcgtcctgctgctgctcgac
tgcctcgactccaggcacgtcaaggtgatcacggaggctctggtggccttcacctggctg
ctgaagttccctctcccagcagtggagcagaacgcagaccagatgaccaagcagctgttc
gtcctgctgaaggattactccaaggccggagcggcccgcggggagaactaccagctggtg
cagaactgcttcaaggccattaccatactggtgaagaatgtcaaaagcaaccagatctca
gagacacagctgcaagtgctgctgggatacgctgaggaggacatctacgaccagtcccgc
caggcgaccgccttcggcctgctgaaggcaattctgtccaggaagctcgttgtcccagag
atggaggagctcatgacgaaagtggccaagctttctgtcaccggcaacaacggcgggatc
agaatccactgtcgacagatctatctcaaatacctgctggactaccccctggggaagaag
ctgagggggcacctggactttgtggtggcgcagctgcactacgagcacgacaccggcagg
gagtcagtgctggagatgctggcctacatcttccagaccttccctaaggagctgctgctg
aggcattgcggcttgttcttcgccccgctggccctggttgtagtcaatgatgactcggca
cgctgtaagaaaatggccgccatggccatcaaggcactgctggcccagctggacattaac
caccagaacaccatgtactcctttgtcaacacctggctgcatgcagaaaaggccagcatg
cggcgtctgggtgctcagatctgcggcctgttcgtggaggtggaggaggagcagttcacc
cgccgcctggacgacctgcttcctctgctggagaaagagataaaccccgtcaactacgat
gacatcgaggaggagcaggacgagaagggggcggaccgactgctctacagtttcctcacc
ctcatcaccaaactgagcaaacactgcagcctgctggagctcagacagcctcacgacaca
ctcactcttatctggggtcacattgaagcccacctgcggtaccctcactgctgggtgtgg
ctgacctcctcgcagctctttggtcagctgtttgcagcccatccggcggagcagctggtg
gctgggtggagaggagagggtggagacgcttcacctcagtccccaactactgctttcatc
accaggggtctggacaagaagatgagagagctggcgttgtctttctgccatcagctacag
tccaagttcctggacacagcctcaggagagcaggtgatcaagaacctgctgttcgtcggc
aaggtgatctacctcgtttcccccgagtctgacgtcacgcccgctcaggaagaagtgaaa
gaggaagagaagacggaagaagagaaagagggggaggtggaggagaagaaggaagaagat
gaaaatgacaaggagaaggaagatgaggaagaagacgaggaagacgataaggacgaccgg
ccgccttccctgctgtggctgatgaagaagctgtcgctgatggcaaagagagaggcggca
cacactcccaaagttcctctgaagagaacgtgtgtgtttaagttcctgggagcgatagcc
atggacctggggaaggagcgactcggcccctatctgagcaccatcatcactcctctgtac
agggagctggacagcacctacgcagaccaagaccccaccctgaagaacctggctcaggag
ctgatcgagctgctgaagagacacgtggggctggagaagttctctctggccttctctggc
gtccagaaggagttttcacagaggagagccgcgcgcaaaaaacacagagccatacaggcg
gtggctaacccagacatcgcagccaagaagaaactcaagaagcacaggaacaaaatcgaa
gccaagaagaggaagattgagttcctccggcccggatacaaagccaagaggcagcggggc
aacacgctcaagaacctggccatggtgcagtga
DBGET
integrated database retrieval system
